Pangasianodon hypophthalmus (striped catfish): 113528896
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Entry
113528896 CDS
T05759
Name
(RefSeq) pre-B-cell leukemia transcription factor 1 isoform X1
KO
K09355
pre-B-cell leukemia transcription factor 1
Organism
phyp
Pangasianodon hypophthalmus (striped catfish)
Pathway
phyp04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
phyp00001
]
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
113528896
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
phyp03000
]
113528896
Transcription factors [BR:
phyp03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain TALE
113528896
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PBC
Homeobox_KN
Homeodomain
DUF7260
UCH
GAIN
LZ3wCH
Ribosomal_60s
Motif
Other DBs
NCBI-GeneID:
113528896
NCBI-ProteinID:
XP_026773528
LinkDB
All DBs
Position
Unknown
AA seq
429 aa
AA seq
DB search
MDEQPRMMHSHAGVGMAGHPGLPQHMQEGTGAADGDGRKQDIGDILQQIMTITDQSLDEA
QARKHALNCHRMKPALFNVLCEIKEKTVLSIRGAQEEEPPDAQLMRLDNMLLAEGVSGPE
KGGGSAAAAAAAAASGGAGADNSAEHSDYRAKLSQIRQIYHTELEKYEQACNEFTTHVMN
LLREQSRTRPISPKEIERMVSIIHRKFSSIQMQLKQSTCEAVMILRSRFLDARRKRRNFN
KQATEILNEYFYSHLSNPYPSEEAKEELAKKCSITVSQVSNWFGNKRIRYKKNIGKFQEE
ANMYAARTAVNAASVSAHGSQANSPSTPNSAGSAGSFNMSNSGDLFMSVQSMNGDSYQGA
QVGANVQSQVDTLRHVISQTGGYSDGLTANQMYSPQGINANGGWQDATTPSSVTSPTEGP
GSVHSDTSN
NT seq
1290 nt
NT seq
+upstream
nt +downstream
nt
atggacgagcagccgcggatgatgcactctcacgccggggtggggatggcggggcacccg
ggcctgccccagcacatgcaggagggaaccggagcagccgacggcgacggcaggaagcag
gacatcggagacattttacaacaaatcatgaccattacagaccaaagtctggacgaagcg
caggccaggaagcacgcgctgaactgtcacaggatgaagcccgcgctctttaacgttctg
tgtgaaataaaagaaaaaacagtgctgagtatccgcggcgcccaggaagaggagcctccc
gatgcccagctcatgagactggacaacatgctgttggctgaaggtgtgtcggggccagag
aaagggggcgggtcagctgcggctgcagccgctgcagcagcttcgggaggagccggagcc
gataattcagctgaacactctgactacagagccaagctctcccagatccgccagatttac
cacaccgaactggagaaatatgaacaggcatgtaacgagtttaccactcacgtgatgaac
ctgttgcgagagcagtcgcgcacacggccaatctcacccaaagagatcgagcgcatggtc
agcatcatccaccgcaagttcagctccatccagatgcagctcaagcagagcacctgcgag
gcagtcatgatcctccgctcccgcttcctcgatgccaggaggaaaagacgaaacttcaac
aaacaggccaccgagatcctgaacgagtacttctactcccacctcagtaatccatatccc
agtgaggaggccaaggaggaactggccaagaagtgctctatcactgtctcccaggtgtcc
aactggttcggaaacaaacgaatccggtataagaagaacattggaaagttccaggaggaa
gccaatatgtacgcagccagaactgcagtgaatgcggccagcgtgtcagctcatggcagc
caggcaaattccccctccacccccaactcagcaggttctgctggctcttttaacatgtcc
aactctggtgatttgtttatgagtgtgcagtctatgaatggcgattcataccagggggct
caagtgggagccaacgtgcagtcgcaggtggatacccttcgccatgttatcagtcagaca
ggaggatacagtgatggcctcacagccaaccagatgtacagtccgcagggcatcaatgct
aatggtggatggcaggatgctactaccccctcctcagtgacctcacccacagaaggaccc
gggagtgttcactctgacacctccaactga
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