Pangasianodon hypophthalmus (striped catfish): 113529243
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Entry
113529243 CDS
T05759
Symbol
cd40lg
Name
(RefSeq) CD40 ligand
KO
K03161
tumor necrosis factor ligand superfamily member 5
Organism
phyp
Pangasianodon hypophthalmus (striped catfish)
Pathway
phyp04060
Cytokine-cytokine receptor interaction
phyp04514
Cell adhesion molecules
phyp04672
Intestinal immune network for IgA production
Brite
KEGG Orthology (KO) [BR:
phyp00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04060 Cytokine-cytokine receptor interaction
113529243 (cd40lg)
04514 Cell adhesion molecules
113529243 (cd40lg)
09150 Organismal Systems
09151 Immune system
04672 Intestinal immune network for IgA production
113529243 (cd40lg)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04052 Cytokines and neuropeptides [BR:
phyp04052
]
113529243 (cd40lg)
04090 CD molecules [BR:
phyp04090
]
113529243 (cd40lg)
Cytokines and neuropeptides [BR:
phyp04052
]
Cytokines
Tumor necrosis fators
113529243 (cd40lg)
CD molecules [BR:
phyp04090
]
Proteins
113529243 (cd40lg)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TNF
Muted
DUF4897
Motif
Other DBs
NCBI-GeneID:
113529243
NCBI-ProteinID:
XP_026774106
LinkDB
All DBs
Position
Unknown
AA seq
267 aa
AA seq
DB search
MSTMINTFHSSFNPPPVPPRPGHRGGPALPSNTPLVKFLSVLLLLLMIQTFGGFLYLFHR
INMLQDRRNDNEISTLKQLQQCADNLEYENVPFCNKLVENFKTVIKKVSQAEGRVALLIE
TGSSTTPQANMVLSVTSQSKMKNQSNTLLWDGSHSVMDKISLSTSGALTIHYPGYYLIQS
KVTFSKAHEKATLGQTIWTQNTKVGNPTKLLESYCSLPRYSTIPDLCTASQTGVFRLEKG
QTLFVNVTDRHLLHLDSTTFGLFRLQD
NT seq
804 nt
NT seq
+upstream
nt +downstream
nt
atgtccactatgataaacacctttcacagcagcttcaatcctccaccggtacctccacgg
ccaggccaccgaggaggaccagcgctgccatcaaacacaccattagtcaagttcttgtcg
gtgctgctgcttctgctaatgatacagacgtttggagggtttctatacctgttccataga
atcaacatgctgcaggacagacgcaatgataacgagataagcacactaaaacaactacag
cagtgtgcagacaacctagaatatgagaatgtaccattctgcaacaagcttgtcgaaaac
ttcaagactgtcataaaaaaggtctctcaagctgaaggaagagtggctttgttgattgaa
actggatcctccaccacacctcaagcaaacatggtgttaagtgtgacttcacaatctaaa
atgaagaatcagtccaataccctgttgtgggatggatcccactctgtgatggataagatc
agcctcagcacatcaggagccctgaccattcactaccctggatattatttgattcaatct
aaagtcaccttttccaaagcgcatgaaaaagcaacactcgggcaaaccatatggacccaa
aatacaaaagtgggaaacccaacgaaactgcttgagtcctactgcagcttgccccggtac
agtacaatacctgatctgtgtactgcctcgcagacaggggtgttcagacttgagaagggt
cagacgctgtttgttaatgtaactgacaggcacttgctgcacttggactctaccactttt
ggattgttcaggctacaggactga
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integrated database retrieval system
