Pangasianodon hypophthalmus (striped catfish): 113529575
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Entry
113529575 CDS
T05759
Name
(RefSeq) protocadherin gamma-C5-like isoform X1
KO
K16497
protocadherin gamma subfamily C
Organism
phyp
Pangasianodon hypophthalmus (striped catfish)
Brite
KEGG Orthology (KO) [BR:
phyp00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
phyp04515
]
113529575
Cell adhesion molecules [BR:
phyp04515
]
Cadherins
Protocadherins
113529575
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Cadherin
Cadherin_tail
Cadherin_2
Cadherin_C_2
Cadherin_CELSR2_9th
PepSY
Syndecan
Motif
Other DBs
NCBI-GeneID:
113529575
NCBI-ProteinID:
XP_026774643
LinkDB
All DBs
Position
Unknown
AA seq
993 aa
AA seq
DB search
MLRINNWGQIWFDHEKTCASDVCELMMERRKRSCCSGWPALWHALWLALSSLSCLSSATA
ELRYSVAEEQQPGSFVGNIAKDLGLTVQKISERNMRVISDPSAQYFEINSVSGALVISET
IDRERLCGLSLTCSLHLQIVLHNPLDMQRVVVDVVDVNDNSPQFPARNSSLEVSEAAAPG
TRFRLESARDPDVGVNSLRTYRLEPNDFFALNVETKSDGSKVPELVLEKALDRETRAAFR
LLLTAVDGGQPEKSGTTLLLITVLDVNDNAPVFAEPVKRVSLLENSPVGTIVAKLNATDV
DSGTNGQISFLFSKYTPEIILKVFSVDAKTGELLVIGEVDYEQAKVYDITVQARDGGTPA
MEGSCHIKVEISDVNDNTPEVTLTSLTSPISEDAPTNTVIALISASDLDSGKNGQVTLKV
SPGLPFKLKSAFGEYYTLLTDGPLDREAIPEYTVVVTVTDAGSPPLSSKKTFAVSLSDVN
DNAPVFSQPYYSVDIVENNAPSTSLVTVSASDPDLGDNARLTYSILASTVNGSPVSSYVY
INPENGNIFTMRTLDYEQMNAFKIEVQVQDSGVPPRSSNVTVHVFVTDQNDNPPVILYPA
NSGDSGLQLTMPRSAPVGHLVNKIVGYDPDSGHNAWLFYSIAPGEDAEFFRIGVNTGELR
TARKLSEVEAGSQARSSYSFVVVVQDNGQPNQSTSASVTINIEEKSADTATDLHKTSSRK
TGGIPDISLYLIISLGCVTLVFLVTIVVLLVRCLRHKDDLTCCYSRKGFRSRHAYQQRSH
KDLHLQLNTDGPIRYMEVVGGPQEPHTRTYRPCYSTISSRSDFVFVKTPLLSHNNTLNMT
LTRKHLLNSANEQKPPNADWRFNQNQRPGPSGAAATPEVAMGTGPWPNPPTEAEQLQALM
AAANEVSEATNTLGPGTMGLSTRYSPQFTLQHVPDYRQNVYIPGSTATLSANPQQPQQPP
QALPAPQVTSAQVEPPKAQTPASKKKITKKEKK
NT seq
2982 nt
NT seq
+upstream
nt +downstream
nt
atgctgaggattaataattggggacaaatatggtttgatcacgagaaaacttgtgcctca
gacgtgtgtgagctcatgatggagcggagaaagaggagctgctgctcgggatggcccgcg
ctctggcacgcgctctggctcgcgctctcctccctgtcctgcctctcgagcgcgacagca
gagctccgctattccgtggctgaagagcaacagccgggctcttttgtcgggaacatagcg
aaagacttgggcctcacggttcagaagattagtgaaaggaacatgcgcgttatttcggac
cccagcgctcagtatttcgagataaactcagttagcggtgctttagtcattagcgagacc
atcgacagggagcgcttgtgtggtttgagtttaacatgttctttgcaccttcaaatagtt
ctccacaacccgttggatatgcagcgcgtcgttgtagacgttgttgatgtgaacgacaac
tcgccgcagttcccggctcgtaactcatcgctggaggtctcggaggcggccgcgccggga
acccgcttccgcctggagagcgcgcgcgaccccgacgtgggcgtcaactcgctgcggacc
taccgtctcgagcccaacgacttcttcgcgttaaacgtcgagacgaaaagcgacggcagt
aaggttcccgagcttgtgctggagaaggctcttgatcgcgagacgcgcgccgcatttcgc
ctcctgctcacggcggtggacggcggacagccggagaaatccggcaccacactgctgctc
atcacagttttggatgtgaacgacaacgcgcccgtttttgctgagccagtgaaacgggtt
agcctcttggagaactctcctgttggcactattgtggccaaattaaacgctacagatgta
gactctggaacgaacggacaaatatctttcttatttagcaaatacaccccagagataatt
ctcaaggttttcagtgtggatgctaaaaccggagagctcctggttattggtgaggtggat
tatgaacaggcgaaggtttatgacatcactgttcaggccagggacggtggaactcccgcc
atggagggttcctgtcacatcaaagtggaaatatcggatgtgaacgataacacgccggaa
gtgacgttaacatccctcaccagtcccatcagcgaggatgcaccaacaaacactgtcatt
gcattgattagtgcaagtgacttagattcaggtaaaaatggacaggtgacattaaaagtg
tctccagggctgccatttaaactgaaatccgcttttggggagtattacaccctccttaca
gacggccctttggacagagaagccatccctgagtacactgttgttgtgactgtgacagat
gccggttctcctccattgtcctctaaaaagacatttgctgttagtctctctgatgtgaac
gataatgcaccagtattctcacagccatattactctgtggacatcgtggagaataacgcc
cccagtacctcactcgtgacagtgtcagcctctgacccagacttaggggacaatgcccgt
ctcacctactccatcttggcctctaccgtcaatggcagccctgtgtcctcttacgtctat
atcaacccagagaatggcaatatctttactatgcgtacgttggactacgagcaaatgaat
gcctttaagatcgaagtacaggtgcaggacagtggggtcccaccacgcagctccaatgtc
actgtccatgtctttgtcactgaccagaatgacaatccgcccgtcatactttaccctgct
aactctggtgactctggccttcagctgaccatgccccgctctgcccctgtcggccatctt
gtgaataagatagttggatatgatcccgacagcgggcacaacgcatggctgttctacagc
atcgcacccggcgaggatgcagaatttttccgtattggagtgaacacaggcgagcttcga
actgcaaggaaactatcagaggttgaggcagggagccaagcgcgctcatcatacagcttt
gtggtggtcgtgcaggacaatggacagcctaaccagtccaccagtgcctctgtcaccatc
aacatagaggagaagagtgcagacacagccacagaccttcacaaaacatcttctcgtaaa
acaggcggaattccagacataagcttgtacctcataatctcactgggctgtgtgactctg
gtctttcttgtgaccattgtggtgctgctggtgcggtgccttagacacaaagatgacctg
acgtgttgctactccaggaagggcttccgttctcgccatgcttaccagcagcgttcccat
aaggaccttcacctccagctgaacacagatgggcctatccggtacatggaggtggtgggg
ggccctcaggaaccccacacacgcacatacaggccctgctactccacaatctccagcagg
agcgactttgtgtttgttaagactcctctcctgagccataacaacacattaaacatgacc
ctaacccggaagcacttattgaactcagccaatgagcaaaaaccccccaacgctgactgg
cgtttcaaccagaaccagagacctggacccagtggagccgctgccactcctgaggtcgcc
atgggaaccggaccctggccaaaccccccaactgaggccgagcagctccaggcactaatg
gccgccgcaaatgaagtgagtgaggccactaacacactgggtcctggcaccatgggcctg
agcacacgctacagtccccagttcaccctgcagcatgttcccgactaccgacagaacgtc
tacatcccgggcagcactgccacgctcagtgccaacccccagcagccccagcagcctcct
caggcactgcctgctccacaggtcaccagcgcccaggtcgagccgcccaaagcccagacg
cctgctagcaagaagaagatcaccaagaaggagaagaaataa
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