Pangasianodon hypophthalmus (striped catfish): 113529620
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Entry
113529620 CDS
T05759
Symbol
pdgfrb
Name
(RefSeq) platelet-derived growth factor receptor beta isoform X1
KO
K05089
platelet-derived growth factor receptor beta [EC:
2.7.10.1
]
Organism
phyp
Pangasianodon hypophthalmus (striped catfish)
Pathway
phyp04010
MAPK signaling pathway
phyp04020
Calcium signaling pathway
phyp04510
Focal adhesion
phyp04540
Gap junction
phyp04810
Regulation of actin cytoskeleton
Brite
KEGG Orthology (KO) [BR:
phyp00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
113529620 (pdgfrb)
04020 Calcium signaling pathway
113529620 (pdgfrb)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
113529620 (pdgfrb)
04540 Gap junction
113529620 (pdgfrb)
09142 Cell motility
04810 Regulation of actin cytoskeleton
113529620 (pdgfrb)
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
phyp01001
]
113529620 (pdgfrb)
09183 Protein families: signaling and cellular processes
04090 CD molecules [BR:
phyp04090
]
113529620 (pdgfrb)
Enzymes [BR:
phyp01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.10 Protein-tyrosine kinases
2.7.10.1 receptor protein-tyrosine kinase
113529620 (pdgfrb)
Protein kinases [BR:
phyp01001
]
Receptor tyrosine kinases (RTK)
PDGFR family [OT]
113529620 (pdgfrb)
CD molecules [BR:
phyp04090
]
Proteins
113529620 (pdgfrb)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PK_Tyr_Ser-Thr
Pkinase
Ig_3
I-set
Ig_2
ig
V-set
Ig_VEGFR-1-like_5th
C2-set_2
Ig_6
VEGFR-1-like_Ig-like
RIFIN
EcsB
VEGFR1-3_N_Ig-like
Motif
Other DBs
NCBI-GeneID:
113529620
NCBI-ProteinID:
XP_026774719
LinkDB
All DBs
Position
Unknown
AA seq
1082 aa
AA seq
DB search
MQGVRVSLFPLTPLITALLILLLCSAGSGLELSPSTKEIILTTNASISIICSGWAPVSWR
YKRDEKQPVFRTENRSLTSSVLHLENVTWRHTGVYVCTEDGSEESREVAIYVPDPEEWFL
ENDYLAITKTSDEGTVPCLVTDPKINVTLHEKDTESLVTGKYIPTRGFTGILEDKIYKCR
GEYNGEEKWSHLFYVFSILVPEALDAHINASKTVLKQGEPLSVNCTAHGVELVFFSWELP
NKDVGDVEVLTDIIPATMSMRSFLNISQTTLEHSGQYVCHAQESVGNQRTSLSINITVLE
RGFVELSSFLNPNVSALLHENVELRVEVEAYPKPHIRWSKDGAMINGDNVINTRQEQETR
YVSTLTLVRIRLEQKGYYTVHVANEDDSKEMTFDLVVKVPPQITELSDHHLPEKKHAVTC
VAEGVPSPNIQWFSCDSIHKCGNKSTVWSPLVADTESINIVNNNTYNESRKIHQVYSQVT
FLRPQQITVRCQARNERGARARDIRLVTSTLFSQVAVLAAVLALVVIAIIFIIILIAVWR
KKPRYEIRWKVIESVSQDGHEYIYVDPVHLPYDLAWEMPRDSLVLGRVLGSGAFGRVVEA
TAYGLTNSQSSTKVAVKMLKSTARRSETQALMSELKIMSHLGPHLNIVNLLGACTKQGPL
YLVTEFCRYGDLVDYLHRNKQSFLQNYANKIHLANGSDSHICIDSVVPSGKGYVSFGSES
DGGYMDMRKEDMTEYVAMQELTDTIKYADIQPSPYESPYQQDIYQEQGHRVDLSLVISDS
PILSYSDLVGFSFQVAKGMEFLASKNCVHRDLAARNVLICEGKLVKICDFGLARDIMHDN
NYISKGSTFLPLKWMAPESIFHNLYTTLSDVWSYGILLWEIFTLGGTPYPDLPMNELFYN
ALKRGYRMAKPMHASEEIYEVMRKCWEEKFEKRPEFSYLVQEMGNMLTEGYKKRYSQVSE
SFQKSDHPAVVRSKPRVPSPFPCTLPPSSPSTIFPPSSTPNHCLEADQEMAPAPYNGYII
PIPDPKPEEECQEVSMPTESPSSSSVGSEAETASLEAPSAEQECNDQLKEHSNTPDAEES
FL
NT seq
3249 nt
NT seq
+upstream
nt +downstream
nt
atgcagggagtccgtgtcagccttttcccactgacacccttaataacagccctcctgatc
ctcctgctgtgttcagctggttctggtctggagctcagccccagcacgaaagagatcatc
ctgaccactaatgcctcaatctccatcatctgttccggctgggcgcctgtctcctggcgc
tacaaaagagatgagaaacaacctgtgttcagaacagagaaccgatccctcacctctagc
gttctccaccttgagaatgtgacatggagacacacaggagtgtacgtgtgcactgaggat
ggttctgaggagagcagggaggtggctatctatgtgccagacccggaggagtggtttttg
gagaatgactatcttgcaatcactaagacaagcgatgaagggacagtcccttgtctggtg
acagacccaaaaataaacgttacgctccatgaaaaagacactgaaagcctagtgaccggc
aagtacatacccaccagaggctttacaggaatactggaagacaagatttacaaatgcaga
ggagaatacaacggagaggaaaagtggtcccatttattctacgtcttcagcatcttagtt
cctgaggcgctggacgcccacatcaatgcctcgaagacggtgctgaaacaaggcgagccg
ctcagcgtcaactgcacggcccacggagttgagcttgtcttcttctcctgggagttaccg
aacaaagacgttggagatgtggaagtcttgacagatataatcccagcgaccatgagcatg
cgctccttcctgaacatatcccaaaccactctggaacactctggacagtacgtctgccac
gcacaagagagcgtgggcaatcaacgtacttctcttagtatcaacatcactgtgctggag
agaggttttgtcgagctgagctcatttctaaaccctaatgtctcagcattgctgcatgag
aacgtggagctgagggtggaggtggaggcataccccaagcctcacatccgctggagcaaa
gatggagccatgatcaatggagacaacgtcatcaacacgagacaggaacaagagaccagg
tacgtcagcacattaactctagtgagaatccgcctagagcagaaaggctattacactgtt
catgtcgccaatgaggatgattccaaagagatgacctttgacctagtggttaaagttccc
cctcagataaccgaactttcagatcatcacctgccggagaagaagcacgccgtcacctgt
gtggcagagggagtcccatcccccaatatccagtggttcagctgtgacagcattcacaaa
tgcggcaacaaaagcactgtgtggagccccctagtggcagatacagagagcatcaacatt
gtaaacaacaacacctataacgagagccgcaagatccaccaggtgtacagccaggtgaca
tttctccgtcctcagcagatcactgtccgctgccaggccaggaacgagagaggagctcgg
gcacgggacatcagacttgtcactagcactctgttctcacaggtggctgttctggctgcg
gttcttgcactagttgtcatagccatcatttttatcatcatcctaatcgcagtgtggagg
aagaagccgcgttatgagatcagatggaaggtgattgagtctgtgagtcaggatggacat
gagtacatctacgtggaccctgttcacctcccctatgacctggcctgggagatgcctcga
gacagccttgtcctcggtcgcgttctgggatcaggggcgtttggcagagtggtagaggca
actgcatatggactcaccaattcccagtcttctactaaagtggctgtgaaaatgctcaaa
tcaacggcgcgtaggagcgagactcaggctctgatgtccgagctgaagatcatgagtcac
ctgggtccacaccttaacatcgtcaacctgctgggagcctgcaccaaacaaggtcctctg
tacctggtgacggagttctgtcgatacggagacctggtggactaccttcacaggaacaag
cagagcttcctgcagaactacgctaacaagatccacctggctaacggcagcgacagccac
atctgcatcgactcagttgtgccttctgggaaaggctacgtgtcatttggctctgagagt
gacggtggttatatggacatgaggaaagaggatatgactgaatatgtggccatgcaagag
ctgacagacaccatcaaatatgctgatatccagccatctccatatgagtcaccatatcag
caggacatctaccaggaacaaggtcacagagtggacctctcactggtcatcagtgattct
cccattctgagctactctgatctggtgggcttcagcttccaggtggccaaaggcatggag
tttctggcctccaaaaattgtgttcaccgggacctggcggctaggaatgtcttaatatgt
gagggaaaactggtgaaaatctgtgactttgggctggccagagacatcatgcatgacaac
aattacatctccaaaggcagcacgttcctgccgctgaagtggatggccccagagagcatc
ttccataacctctacaccacactcagtgatgtctggtcttatggtattttgctgtgggag
atattcactctgggaggaaccccatacccagatctccctatgaatgagctcttctataac
gctcttaagagaggctatcggatggctaaacccatgcacgcttcagaggaaatttatgag
gtgatgaggaagtgctgggaagagaagtttgagaagaggccggagttctcctatctggtg
caggagatggggaacatgcttaccgaaggctataaaaagcgatactcccaggtcagtgag
agctttcagaagagtgatcatccagccgtggtacgcagcaagcccagggtgccctctcca
ttcccgtgcacactccctccctcttccccttccaccattttcccaccatcctccacacct
aaccattgcctagaggctgatcaagagatggcaccagcaccttataatggttacatcatc
cctatccctgaccccaagcctgaagaagagtgccaggaagtcagtatgccaacagaaagc
ccctccagcagttctgtagggtctgaggcagagacagcatcactggaggctcccagtgca
gaacaagagtgcaatgatcaactgaaggaacactccaatactcctgacgcagaggagagc
ttcctgtaa
DBGET
integrated database retrieval system