KEGG   Pangasianodon hypophthalmus (striped catfish): 113533114
Entry
113533114         CDS       T05759                                 
Symbol
ercc6l2
Name
(RefSeq) DNA excision repair protein ERCC-6-like 2 isoform X1
  KO
K20098  DNA excision repair protein ERCC-6-like 2 [EC:5.6.2.-]
Organism
phyp  Pangasianodon hypophthalmus (striped catfish)
Brite
KEGG Orthology (KO) [BR:phyp00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:phyp03400]
    113533114 (ercc6l2)
DNA repair and recombination proteins [BR:phyp03400]
 Eukaryotic type
  Other factors with a suspected DNA repair function
   Helicases
    113533114 (ercc6l2)
SSDB
Motif
Pfam: SNF2-rel_dom Helicase_C ResIII HDA2-3 VIGSSK ERCC3_RAD25_C
Other DBs
NCBI-GeneID: 113533114
NCBI-ProteinID: XP_026780781
LinkDB
Position
Unknown
AA seq 1307 aa
MEDDVGLIPVPQRNRMFKVPFEDEKPAFHTNQKPPGPSEPFVLSGAIQVPYTINRYLRDY
QREGVKFIYHSYVKSRGCILGDDMGLGKTIQVISCLAAILQKTGTWQDVENNRPEFLQSQ
VPSKQSKVKKVFLIVAPLSVLYNWKDELDTWGHFKTVVVHGVRKEEELARVNRGRCEIVL
TTFETLRLCLDEFNSLDWAAVIVDEVHKLKNFKSQITQAMKGLKCKVRVGLTGTILQNNL
EELWCVMDWANPGCLGSLGSFKNRFSEPIEQGQKHSATKRSLAEGRKAVQTLATLLSRWF
LRRTKALISDQLPKKDDRVVYCSLTDFQQAVYRAVLDTDDVRLLLQSSQKCPCSSGLTRK
KCCYKLNSDGVPVRHMYFSYLAILRKVSNHVALLQSKDGTSKKQEKYVTAICEQVFKKFP
DFTERCKQAAFEAMSDPIYSGKMKVLQRLLNHFITRKDKVLLFSLSTKLLDVLESYCMAE
GLEYRRLDGSTKSKDRIHIVKEFNSANDINLCLVSTMAGGLGLNFVGANVVVLFDPTWNP
ANDLQAIDRAYRIGQCKDVKVFRLISLGTVEEIIYLRQIYKQQLQSSVIGNENARRYFEA
VQGVDGQTGELFGIRNLFRLQTDGTCLTRRILEREGHVEVGIMTASTQATDERVQELQDP
VCVSADVSAQQDNRPAAAYGTSARFSNAEVLDFSSTSEDEDPCGSRSKATYPKAGEEFGP
STGSAANMNLSALLMKHMTSGIQRSSESSEDSQSDTDSKGLNLEETKVAKGKTEWFLSSD
SEEERTEAKKVCDHVCMEESEDLEIFPNHYTKAQQRDRGNTNKEQRPDGAVLAVQRQRRT
EEVESFDSSEDEAPVRRVKFKKSLRRPFRAQNSAQKSVQFTGLKCPTTHSRKSQIIEGTS
TGTIDTLLVGLQEVSYTHSNQKLVGSSRAENRLSRAALQDVFELSKHSQLPANHLYDISE
TQSGIPQLSELTNGGEEDMPEGHDKTCLKHQVTHTIETSLHTKTATISVGKTPAAVRMQQ
LEEMAKFFRATSVQEFAEELVKSSSAQRLSKLCEFYSHSSPELTDSIQKTFPEPVTELKP
STSPLTAKCRMSRQRPTSKRTLLNSVQKPHDEAETGASQKKRRTKAQSAKDAHHHCVSQV
ELKNDCMSLPDSRRSPREKSFRTSTDIHPHSQKNANSRSSSTTTSTTELSPFSRDDQADQ
NSNPTLISDLIGDTSILDDLFKQNRSADRPKPATAPIPSPTERTKNRSKDFWDILNEGNE
ESINKLTDLSQLEKVCRSVNVCAKSRSESQLESSQLWKKNEKFLWKR
NT seq 3924 nt   +upstreamnt  +downstreamnt
atggaagatgatgttggattaatccccgtaccccaaaggaacagaatgtttaaggtccca
tttgaagatgagaaacccgctttccatacgaaccagaagcctcctggtccctcagaacca
tttgttctgtcaggagccattcaagtgccatacactattaacagatacctacgagactac
cagcgagagggggtaaaatttatctatcacagctatgtgaagtccagaggttgcatcctg
ggtgatgacatgggcctaggaaagaccattcaggttatcagctgcttggctgccattttg
cagaaaacagggacatggcaggatgttgaaaataacaggccagagtttttgcagtcacag
gtgccatcaaaacaatccaaagttaagaaggttttcctcattgtggctcccctgtctgtg
ctctacaactggaaagatgagctggacacttggggccatttcaaaacagtggttgtccat
ggtgtgaggaaggaggaagaattggcccgtgtgaacagaggaagatgtgagatcgtcctg
acaacatttgagacgctaagactctgtctagatgagttcaacagtcttgactgggccgct
gtcattgtggatgaagttcacaagctaaagaatttcaaatctcagatcactcaggcaatg
aaaggtctgaaatgcaaagtgcgtgtgggactgactggtacaatcttgcagaacaacctg
gaggaactctggtgtgtcatggattgggccaaccctggatgcctcgggtcactgggtagt
tttaagaacaggttctcggaacctattgaacagggacagaaacacagtgcaaccaagaga
tcactggccgagggccgcaaggccgtccagactctggctacacttctgtcccgctggttc
ctcaggagaaccaaagcactcattagtgaccagttaccaaagaaagatgacagggtggtg
tactgttccctgacggatttccagcaggcagtataccgtgctgtgctggacacggatgat
gtgaggttgctgttgcagagctcacagaagtgtccatgcagcagtggactcaccaggaaa
aagtgctgctacaagctcaattcagacggtgtccctgtcagacacatgtacttcagttat
ctggctatactgaggaaggtctccaatcatgtagccctgctgcagtctaaagatggaacc
agtaaaaaacaggagaaatatgtgactgctatctgtgagcaagtcttcaagaagtttcca
gacttcacagaaagatgcaagcaggctgcatttgaggccatgtcagaccccatctacagt
ggaaaaatgaaggtgctgcaaaggctgcttaatcactttatcacaaggaaagacaaagtt
ctccttttttcactttccacaaagctcctggatgttttggagagctattgcatggctgag
ggtctggagtaccgcaggctagatggaagcaccaagtctaaagatcgcatccacattgtc
aaggaattcaacagtgccaatgatattaacctgtgccttgtgtctaccatggctggtggt
cttggacttaattttgttggggctaatgtcgttgtcctgtttgatccaacgtggaatcca
gcaaatgaccttcaggctatagacagggcatatcgcattggtcagtgcaaggatgtgaaa
gtttttaggcttatctctttgggcacagtagaggagatcatctatctacgccagatttac
aaacagcagttgcagtcctcagtgattggaaatgaaaatgcaagacgctactttgaggca
gtgcaaggagtagatggccaaacaggagagttatttgggatcaggaacctcttccgcctc
cagactgacggaacttgtcttacacgccgcatcctggagagggagggccatgttgaggtg
gggatcatgacagccagtacacaggcaacggatgagagggtgcaagagctgcaggatcca
gtgtgtgtatcggcagatgtctccgcacagcaggataatagaccagcagcagcatatggt
accagtgccaggttctctaatgctgaagttctggactttagcagcactagtgaggatgag
gatccttgcggctctagatcaaaagccacatacccaaaagcaggagaggagtttggaccc
agcactggctctgctgcaaatatgaatctatctgctctgctgatgaaacatatgactagt
gggatacaaaggagctcagagagcagtgaagacagccagtctgatacagactcgaagggc
ttgaacctagaggagaccaaggtagctaaggggaaaacagaatggttcctttctagtgac
tcagaggaagagaggaccgaagcaaaaaaggtctgtgaccatgtttgcatggaggagtca
gaagacctagaaatttttcccaaccactatactaaagcacaacagagagatagaggcaat
actaacaaggaacagaggccggatggggcagtattggcagtacagagacagagacgtact
gaggaggttgagagttttgactcatcagaagacgaagctccagtgagaagggtgaagttt
aagaaaagtcttcgacgcccgtttcgtgcacagaattcagctcaaaaatcagttcagttc
acaggtttaaaatgcccgacaacacattcccgaaagtcacaaatcatagagggtaccagc
accggcaccatagacacattattagttgggctgcaggaagtgagctatacccactccaat
cagaaattggtcggctcgagcagggcagagaaccgcctcagtcgtgctgctttacaggat
gtgtttgaactgagcaagcactctcagctcccagcaaaccatctctatgacatatctgag
acccagtctggaatcccccagttatctgagctcacaaatggtggagaggaagatatgcca
gaaggtcatgacaagacttgtctgaaacatcaggtcacccacaccatagaaacttccctc
cataccaaaactgcaactattagtgttggcaagactcccgctgctgtccgcatgcagcag
ctggaagaaatggcaaagttcttcagagcgacgtctgtgcaagagtttgcagaagagctt
gtgaagagcagctcagcacagcgactgagcaagctgtgtgagttctatagccacagcagc
cctgagcttactgacagtatccaaaagacctttcctgaacctgtgactgagctgaaacca
agtacttcacctctcactgctaagtgcagaatgtctcgacaaaggcctacctcaaaaaga
accctcttaaactcagttcagaaacctcatgatgaagcagaaacaggagcctcacaaaag
aagagaagaactaaggcacaaagtgctaaagatgcccatcatcactgtgttagtcaggtt
gagcttaaaaatgactgtatgtctttgccagactcaagacgaagtccaagagagaaatct
tttagaacgtctacagacattcatcctcactcccaaaaaaatgctaattcacgcagttct
tccacaactacttccactactgaattgtcacctttctctagagatgaccaagcagaccaa
aactcaaacccaacccttattagtgacctcataggtgacacatccattctagatgacctc
ttcaagcaaaacagaagcgcggaccggccaaagccagcaacagcacccattccatcaccc
actgagaggacaaagaacagaagtaaagacttctgggacattttgaatgaggggaacgag
gagagcatcaataagctaacagatctatctcagctggagaaggtttgcaggagtgttaat
gtgtgtgcaaagtccagaagtgaaagccagcttgaaagctctcagctctggaagaagaat
gagaaattcctttggaaaagatag

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