KEGG   Pangasianodon hypophthalmus (striped catfish): 113533625
Entry
113533625         CDS       T05759                                 
Symbol
ift122
Name
(RefSeq) intraflagellar transport protein 122 homolog isoform X1
  KO
K19656  intraflagellar transport protein 122
Organism
phyp  Pangasianodon hypophthalmus (striped catfish)
Brite
KEGG Orthology (KO) [BR:phyp00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   03037 Cilium and associated proteins [BR:phyp03037]
    113533625 (ift122)
Cilium and associated proteins [BR:phyp03037]
 Primary cilia and associated proteins
  Intraflagellar transport (IFT) complex A
   113533625 (ift122)
SSDB
Motif
Pfam: Beta-prop_IFT122_1st Beta-prop_IFT122_2nd Zn_ribbon_IFT122_C WD40 Zn_ribbon_IFT122 Beta-prop_EML_2 WD40_WDHD1_1st WD40_Prp19 WD40_CDC20-Fz EIF3I WDR55 ANAPC4_WD40 Beta-prop_TEP1_2nd Beta-prop_CAF1B_HIR1 NBCH_WD40 Beta-prop_EML Beta-prop_WDR90_POC16_2nd TPR_IF140-IFT172 WD40_MABP1-WDR62_2nd TPR_IFT80_172 TPR_GEMI5 Beta-prop_NUP159_NUP214 Beta-prop_WDR19_1st Beta-prop_IFT140_1st Beta-prop_RIG_2nd Beta-prop_WDR35_TULP_N WDR90_beta-prop_4th Beta-prop_Vps41 WD40_MABP1-WDR62_1st eIF2A Beta-prop_HPS5 Beta-prop_WDR75_1st Beta-prop_NWD2_C TPR_COPA_B Prefoldin_2 Beta-prop_IFT140_2nd Beta-prop_SPT8
Other DBs
NCBI-GeneID: 113533625
NCBI-ProteinID: XP_026781687
LinkDB
Position
Unknown
AA seq 1265 aa
MRAVPTWIDKVHDRDKVEQCIYDLAFKPDGTQLIVAAGNRVLVYDTADGTLIQPLKGHKD
TVYCVAYAKDGKRFASGSADKSIIIWTSKLEGILKYTHNDSIQCVAYNPVTHQLASCSSG
DFGLWSPEQKSVSKHKVSSKITCCGWTNDGQYLALGMMSGVVSIRNKNGEEKVKIERPGG
TSSPVWSIAWNPSKDRRRWLPYIRTEELIDNSAEEASMAEEEAQCMVGNVVLKQSRQSMV
PELEQKRERVRKEEAVLFLQGENHEPTSELRDEHHDILAVADWGQRLSFYQLSGKQIGKD
RQLNFDPCCVSYFSKGEYIVMGGSDKQVSLYTKDGVRLGTIGEQNSWVWTCRVKPDSNYV
VVGCQDGTIAFFQLIFSTVHGLYKDRYAYRDSMTDVIVQHLITEQKVRIKCRELVKKIAI
YRSRLAIQLPEKILIYELSSDDSSDMHYRVKEKICRRFECNLLVVCSQHIILCQEKRLQC
LSFSSVKEKEWIMESLIRYIKVIGGPPGREGLLVGLKNGAILKIFVDNPFPITLLKQNTS
VRCLDMSTSRSKLAVVDEHNTCLVYDIQTKELLFQEPNANSVAWNTQCEDMLCFSGSGYL
NIKASNFPVHQQKLQGFVVGYNGSKIFCLHVYSMAAVEVPQSAPMYQYLERRMFKEAYQI
ACLGVTDSDWRDLATEALEGLDFETAKKAFIRVRDLRYLELINSIEERKKRGENNSDLFQ
ADVYAYQGKFHEAAKLYKRSGHDNRALTMYTDLRMFEYAKDFLASADPKDTKMLMKKQAD
WAKNSKEPRAAADMYLSAGENMKAIEIIGEHGWVDMLIDLARKLDKAEREPLARCAEFFQ
KLNHHGYAAETYSKMGDLKALVQLHVEARHWDEAFSLVEKHPQYKDDVYVPYAQWLAEND
RFEEAQKAFHKAGRQAEAVRVLEQLTHNAVVESRFNDASYYYWMLSMQCLDIARDNEEKR
EEMLKKFHSFQHLAELYHVYHSIHRYMVEPFSSNMPETLFNLSRFLFHNLTKDVPLGISK
VYTLYALAKQSKALGAYKVARHAFEKLQGLKIPAQFQESMELSSLTVRSKPYRDSEDLIP
MCYRCSTHNPLLNNQGNACVNCRQPFIYSASSYEVLPLVEFYLEEGITDEEAVSLIDLEV
PRADKKTTRWQEMNRGDSQSLRLDDDVEHPEEDPFMAKLSFEQGGSEFVPVVVSRAVLSS
MSRRDVLIKRWPKPLRWQYYRSLLPDVSITMCPSCFQMFHSEDYELLVLQHNCCPYCRRP
IDEPN
NT seq 3798 nt   +upstreamnt  +downstreamnt
atgcgagctgttccaacatggatagataaagtgcacgaccgagacaaagttgaacaatgc
atttacgatttggctttcaaacctgacggcactcagctcatagtagcagcaggaaacaga
gttctggtttatgacacagctgatggaactcttatacagccactgaaaggacataaagac
acagtgtactgtgtggcctatgctaaagatggaaaacgttttgcgtcaggatccgcagac
aagagcatcatcatttggacctctaaactggagggaattctcaaatacacccacaatgac
tctatccagtgtgttgcgtacaaccctgtcacacaccagctggcatcctgctcctcaggg
gattttggtctttggtctccagaacagaaatcggtgtccaagcacaaagtcagcagcaag
atcacttgttgtggctggacgaacgatggccagtatctggctctgggcatgatgagtggt
gtggtgagcatcaggaacaagaacggagaggagaaggtgaagatcgagcggccgggaggc
acgtcatcgcctgtctggtctatcgcctggaacccttccaaggaccggaggcggtggctt
ccctacattagaaccgaggagctgatcgacaattcagcagaagaagccagcatggctgag
gaggaggcgcagtgcatggtgggaaatgtagtcctcaagcagagcaggcagagcatggtg
ccggagctagaacaaaagcgagagagggtcagaaaggaagaagcagtgctgtttcttcaa
ggagagaaccatgagccaacatctgagctcagggatgagcaccatgatatcttggcagtg
gctgattggggtcaaagactctccttctaccagctcagtgggaaacagatcgggaaggac
aggcagttgaactttgacccctgctgcgtgagctatttctcgaaaggcgagtacatcgtg
atgggaggttcagacaagcaggtgtccctctacactaaagatggcgttcgtctcgggacc
atcggagagcagaactcctgggtctggacctgcagggttaaaccagactccaactatgtg
gtggtgggttgtcaggatggcactatagcgttcttccagctgattttcagcacagtgcac
ggtctctataaagaccgctacgcctacagagatagcatgactgatgtcatcgtccaacac
ctcatcactgagcagaaagtgcgtataaagtgtcgcgagctagtgaaaaagatcgccatt
taccgcagccggctagccatccagctaccagagaagattctaatttatgagctgagttca
gacgactcttctgacatgcactaccgcgtcaaagagaaaatctgccggcgctttgagtgt
aacctactcgtcgtctgctcccagcacatcatcctctgtcaggagaagagactgcagtgt
ttgtcatttagtagtgtgaaagagaaggaatggatcatggagtctctgattcgctatatc
aaagtgatcggcggcccaccaggaagggagggacttctggtcggcctcaaaaatggagca
attttgaagatctttgtggataacccattccctatcacactgctgaagcagaacacatct
gtgcgctgtctggacatgagcacgtctcgcagtaagctggccgtggtggacgagcacaac
acctgcctggtctacgacatccagaccaaagagctgcttttccaggagcccaatgctaac
agcgtggcctggaacacacagtgtgaggacatgctgtgtttctcaggcagtggctatctg
aacatcaaggcgagcaatttccctgtgcaccagcagaagcttcagggctttgtcgtgggc
tacaatggctcaaagatcttctgcctgcacgtctactccatggctgcggtggaggtgcct
cagtcggctccgatgtatcagtatctggagagacgcatgtttaaggaagcttatcagatc
gcttgcctgggcgtgacagacagtgactggagggatctggctacagaagcgctggaagga
ctggactttgaaacagccaaaaaggcgtttatcagggtccgagacctgcgctaccttgag
ctcatcaacagcattgaagagaggaagaagagaggtgagaacaacagtgatctctttcaa
gcagacgtctacgcttaccagggcaaattccatgaggccgccaaactctataagagaagt
ggccatgacaacagagcgctcaccatgtacacagacctacgcatgtttgagtatgccaag
gacttcctggcttcggcagaccctaaagacacaaagatgctgatgaagaaacaggcggac
tgggctaagaacagtaaagagccacgtgctgctgctgacatgtatctaagcgcgggagag
aacatgaaggctatcgagatcattggagagcacggctgggtggacatgttgatagatttg
gcacggaagcttgataaagcggagcgcgagccactggccaggtgcgctgaattcttccag
aagttgaatcaccatggttacgcggctgagacctactccaaaatgggcgacctgaaagcc
ttggtgcagctacatgtagaggccaggcactgggatgaggctttctctctggtcgagaag
catcctcagtacaaggacgatgtgtacgttccgtatgcacagtggcttgctgagaacgac
cgcttcgaggaggcccagaaagctttccacaaggctggccggcaagcagaggctgtcagg
gttttggaacagcttacccacaatgccgtagtggagagcagattcaacgatgcctcatac
tactactggatgctctccatgcagtgtctggatatagcacgagataatgaggagaagagg
gaggagatgttgaagaagtttcacagttttcagcatttggctgagctgtaccatgtctac
cactccattcatcgctacatggttgagcccttcagttcaaacatgccagagactcttttc
aacctctcgagattccttttccacaacttgaccaaagatgttcctctgggcatctccaaa
gtctatactctgtatgcactggctaagcagagtaaggcactgggggcttataaggtggcg
cggcatgcctttgagaagctccagggcctgaaaatcccagctcaattccaggagagcatg
gagctcagctcactcactgtccgctccaaaccctaccgtgacagtgaggatttaattcca
atgtgttaccgctgttccactcacaacccgctgctgaacaaccagggcaatgcctgcgtc
aactgcagacaaccgtttatttactccgcctcctcttatgaagtccttcccttggtggag
ttctatctagaggaggggatcacagatgaggaagcagtttcactgattgacctggaagtt
cctcgagcggacaagaagacaacccgctggcaagagatgaacagaggcgacagtcagtcg
ctaaggctggatgatgatgtggaacatcctgaagaagatccctttatggccaaactaagt
ttcgagcaggggggcagtgaatttgttccagttgtggtcagtcgtgcagtgttgagctcc
atgtctagaagagatgttttgataaagcgctggcccaaacctctgcgctggcagtactac
cgctctctactgcccgatgtcagtattaccatgtgtccctcttgctttcagatgttccac
agtgaggactatgaactattggttctccagcacaactgttgtccttactgtcgcagaccc
atcgacgagcccaactag

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