Pangasianodon hypophthalmus (striped catfish): 113536215
Help
Entry
113536215 CDS
T05759
Symbol
ints1
Name
(RefSeq) integrator complex subunit 1
KO
K13138
integrator complex subunit 1
Organism
phyp
Pangasianodon hypophthalmus (striped catfish)
Brite
KEGG Orthology (KO) [BR:
phyp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
phyp03041
]
113536215 (ints1)
Spliceosome [BR:
phyp03041
]
Other splicing related proteins
Proteins involved in snRNP biogenesis
Integrator complex
113536215 (ints1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
INTS1_INTS2-bd
INTS1_RP2B-bd
INT1_R3
INTS1_R4
UNC45-central
HTH_RNase_II
Motif
Other DBs
NCBI-GeneID:
113536215
NCBI-ProteinID:
XP_026785855
LinkDB
All DBs
Position
Unknown
AA seq
2097 aa
AA seq
DB search
MNRPKPTSIRRPSGAKTSGHPPPGDFIALGAKSQASETKANPALLKPASTGLPPDRKREA
SSSLPSSSGLSNLTKRPKHPPNPPSALSRLAEVAAVDKRAISPSIKEPSVVPIEVPPAVL
LDEIEAAEAEGNDERIEGLLCGAAKQLKMNRAKPDITLYLSLMFLAKIKPNVFATEGVIE
ALCSLLRRDTSINFKAKGNSLVSVLACNLLMAAYEEDENWPEIFVKVYIEDSLGERIWVD
SSHCKTFVDNIQTAFNTKMPPKTMLLQTETGRSGGDLSAGNSPHPSTPDEDDNQTELLIA
EEKLSPEEEGQVMPRYDELADSVEDYVLDVLRDQLNRRQPMDNVSRNLLRLLTATCGYKE
VRLMAVQRLEMWLQNPKLTRPAQDLLMSLCMNCRTHGADDMDVISNLIKIRLKPKVLLNH
YMLCVRELLNAHRDNLGTMIKLVIFNELSNARNPNNMQVLHTVLQHSPEQAPKFLAMVFQ
DLLTNKDDYLRASRALLREIIKQTKHEINFQSFCLGLMQERKEASYADMEFKERFVIQVT
DLLTVSMMLGITAQVKEAGIAWDKGEKKNLEVLRAFQNQIAAIQRDAVWWLHTVVPSISK
LGPKDYVHCLHKVLFTEQPETYYKWDNWPPESDRNFFLRLCSEVPLLEDTLMRILVIGLS
RDLPLGPADAMELADHLVKRAAGVQSDDLDVLHVERIQLIDAVLNLCTYHHPENIQLPTG
YQPPNLAISTLYWKAWLLLLVVAAFNPQKIGLAAWDGYPTLKMLMEMVMTNNYSYPPCTV
ADEETKTEMISRELQISQKERQEILAFESHLAAASTKQTITESNSLLLSQLTSLEPKGPP
RRPPPHIQEQLKSLNQSLRLGHLLCRSRNPDFLLNIIQRQASSQSMPWLADLVQSSEGSL
DVLPVQCLCEFLLHDAADETPSADDEEEGESKEQKAKKRQRQQKQRQLLGRLQDLLLGPK
ADEHTTCEVLDYFLRRLSSSQVASRVLAMKGLSLVLSEGGIKDGEERDQLMEDDSRDAEL
LPTYQWLLQDLPKLPLFDSVRGMTANALQQAIHMETDPQTISAYLIYLSQHAPVGEQGLH
NDLALDVARLIVERSTIMNSLFSKHSCRPESDATLTALISIFSTYICRMRKTKEGEDLYS
WSESQDQVFLRWTTGETATMHILVVHAMVILLTLGPPKGESDFFTLLEIWFPDKKPLPTA
FLVDTSEEALLLPDWLKLRMIRSEVSRLVDAALQDLEPQQLLLFVQSFGIPVSSMSKLLQ
YLDQAVSHDPQTLEQNIMDKNYMAHLVEVQHERGATGGHTFHSLLSASLPPRRDSAEASR
VKVTVEPPHSSVKMRAVSQLPVISPEDDLTTVLLQLFPVKMDPRWPTPPSRPLALALQQV
LAQEVLRARQGMGQQGGTAARVLQALAALLGSAHAGPLVVAMHHSHAFSCPLLRQLHLYQ
QVASQDVAFSSLFFKVVMQMLTWLESSALEAGSLSNLLKSLVAQYSHKHHITDVRTGFLH
LAEALAYRRDSEVAVRGVIASLRAGEKCNAEPELIRKVLQGLMEGKGSGVSTVPSYRPYL
LALLTHQSNWSTLHQCITTLLNKPKEHNVDPSSALDFLWACSHIPRIWQGRDQKTPQKHT
EKFVLKLTSEELISLVDLILWESELSWRDTGKADETLDQASCSLIQSRLPLLHSCCHSEP
QNVHTVCEYLLNCIKKWGDSVMSRRCENLLLQIYLQFPEVIQHVRLPEATLSGEAAADGS
TCKLDILVHRLITLMADTGESKSAESRVSDATLACRRLAVSHPVLLLRHLTMVAALLHGR
IHLNLQEFRQQHHLTFFSDVLAILELLQPRVFHPDHQRALQDCLLSFIKVLQNFRRLSRM
PVINKFVQFIQKYITHDAAAAVPFLQKHSDILQALASENPDLVQLKSLLAGLTLPVKTGS
SDITAEDRDAEDSSSGSLPLVSISASTALSSADMTKYLKKISGGEAIEDVLDVLTELDEK
SKRNPEIIQYFVNDLQRLMSSPEELCRNMAFSLALRCIQNTPSLASDFLPTFMYCMGSGN
FDVIQTALRNLPEYVLLCQEHADILLHKAFLVGIYGQIDTSSVIAESMKVLHMEATT
NT seq
6294 nt
NT seq
+upstream
nt +downstream
nt
atgaatcggccgaagccgaccagcattaggcgccctagtggtgccaaaacatcaggtcac
cctcctccaggagacttcatcgctttgggagctaaaagccaagccagcgagaccaaagca
aacccagctctgctcaaaccagcatccacaggtttgcctccagaccgcaagagagaggct
tcatcatctctaccctcctcttcaggcctgtccaacctgacgaaacgccccaaacaccct
cccaatccacccagtgcactctcacgcctggctgaagtagctgccgttgacaaaagagca
atttcaccctctatcaaagagccatctgtggtacctattgaagttcccccagctgtatta
ctggacgagatcgaggcagcagaggctgaaggcaacgacgagcgtattgaaggactgctg
tgtggtgcggccaaacagctgaagatgaaccgggccaagcctgacatcaccctctacctc
agcctcatgttcctcgccaagatcaaacccaacgtatttgcaactgaaggagtcatagag
gctttgtgcagcctccttcggcgtgatacctctattaactttaaggctaaggggaacagc
ctggtgtccgttctggcctgcaatttgctgatggctgcgtacgaagaggacgagaactgg
cctgagatctttgtcaaagtgtacattgaggactctcttggcgagagaatctgggtggat
agctcacactgtaaaacattcgtagacaacatacagactgcattcaacactaagatgccc
ccaaagaccatgctgctgcagactgaaacaggccgctccggaggagatctgagcgcagga
aacagtcctcatccttccactccagatgaggatgacaatcaaactgagcttctaatcgca
gaggagaaacttagtcctgaggaggaaggacaggtcatgcccaggtacgacgagttggca
gatagtgtggaggactatgtgctggatgtattaagggaccagctgaaccgcagacaaccc
atggataacgtgtcgcggaacctgctgcgtctgctaacggccacgtgcggctacaaggag
gtgcgactgatggccgtgcagaggctggagatgtggctgcagaatccaaagctgactaga
ccagcgcaggacctcctcatgtctctgtgcatgaactgtagaactcacggagctgacgac
atggacgtgatctccaacctcatcaagatccgtctaaagccaaaagtcctcctcaatcat
tacatgctgtgtgtccgggagctcctgaatgcacacagagataacctgggcaccatgatt
aaacttgtgatctttaatgagttgtccaatgccagaaatcctaacaacatgcaagtgctt
catacggtcctgcagcacagcccagagcaggccccgaagttcctggccatggtattccag
gacctgctgaccaacaaggatgattacctgcgggcatctcgtgccctgctcagagagatc
atcaagcagaccaagcatgagatcaacttccagtctttctgtctgggcctcatgcaggag
cggaaggaggcctcctatgctgacatggagtttaaagagcgttttgttatccaggtgacg
gatctgttaacagtctccatgatgctgggcatcacagcacaagtcaaagaagctggcatt
gcatgggacaagggagaaaagaagaatctggaagtgctcagagcttttcagaaccagatt
gctgccatccagagagacgctgtgtggtggctgcacactgtggttccttctatcagcaaa
ctgggacctaaagactacgtgcactgcctccacaaagtgctgttcacagagcagcctgag
acatattacaagtgggataactggcctcctgaaagtgacagaaatttcttcctgcggctg
tgttcagaggttcccttgctggaggacacgctgatgcgcatcctggtgattggcctgtct
cgagacctgcctttgggcccggctgacgccatggagctggctgatcacttagtgaagcga
gccgccggagtgcagtcagacgatttggatgtcttgcatgtggagaggattcagctcatc
gatgctgtcctgaatttgtgtacataccatcaccccgagaacatccagctccctacaggg
tatcagcctccgaatctggccatatcaacgctttactggaaagcgtggctcctgctgctt
gtggtggcagccttcaacccacagaaaatcggtctggcagcttgggatggctaccccact
ctgaaaatgcttatggagatggtcatgaccaacaactactcctatccaccatgcacggtg
gctgatgaggagacaaagacggagatgattagccgcgagctacagatctctcagaaggag
cgtcaggagatcctggccttcgagagccacctggcagctgcgtccaccaagcagaccatc
acagagagcaacagcctgctgctgtcccagctcaccagcctggagccaaagggtccacca
cgcagaccaccaccacacatccaggaacagctgaagagtctgaaccagtcactgcgcttg
ggacatctcctgtgccgcagccgcaacccagacttcctactcaacatcatccagagacag
gcatcttcccagtccatgccgtggctggccgacctggtgcagtccagtgaggggtcgttg
gacgtgctgcctgttcaatgcctgtgtgaattcctcctccatgatgcagctgacgaaact
ccatctgctgacgatgaagaagaaggagagagcaaagagcagaaagcgaagaaaagacag
aggcagcagaagcagagacaactcctaggccggctacaggatctgctactggggcctaag
gcagatgagcatacgacctgcgaggtgctggactacttcctgcgccgactcagctcctct
caggtggcatccagagtgcttgccatgaagggtctgtctctggtgctgtctgagggaggg
attaaggatggagaggagcgggaccagctgatggaagacgactccagggatgcggagctg
cttcctacgtatcagtggctcctgcaggacctgcccaagctgccgttgtttgacagcgtg
aggggcatgacggccaacgccctgcagcaggccattcacatggagactgatcctcagacc
ataagtgcctatctgatttacctctcccagcatgcaccagtgggggagcagggcctgcac
aatgatctagcgctggatgtagcccggctgattgtggagcgctccaccatcatgaacagt
ctgttctcaaagcactcgtgcaggccggagtcagacgccacgctcactgccctcatatcc
atcttctccacctacatctgtcgtatgaggaagaccaaggaaggagaggatctttacagc
tggtccgagtctcaggatcaggtgtttctgcgctggacgacaggagaaacggctacaatg
cacattctggtggtccatgccatggtcattctgctcacgctaggaccacccaaaggtgaa
agtgacttcttcactctgctagaaatctggttccccgataaaaaaccccttcctactgct
ttcctggtggacacctcagaggaagctcttctgttgcccgattggctaaaactgaggatg
atccgctcagaggtatcccgattggttgacgcagcgctgcaggatttggaaccgcagcag
ctgctgctgttcgtgcagtcgttcggcattcccgtgtccagcatgagcaaactgctgcag
tacttggaccaagccgtctctcatgacccacagacactggagcagaacatcatggacaag
aattacatggctcatctggtggaggtgcagcatgagagaggagcgacaggcggacacacg
tttcacagtttactcagtgcatcacttccaccacgcagagacagtgcagaggcgagcagg
gtgaaagtgacagtggagcctccacacagctcggtgaagatgagagccgtgagtcagttg
cctgtcatcagccctgaagacgatctcactactgtcctgctgcagctgtttcctgtgaag
atggacccgcgctggcccacgcccccatcccgccctctggctttggccctgcagcaggtt
ctcgctcaggaagtgttgcgggcacggcagggaatgggtcagcagggtggcacagctgcg
cgtgtcttgcaggccctagcagccctgcttgggtcggcccacgctggaccactggtcgtg
gcgatgcatcatagccatgccttctcgtgccctctgctgcgccagctgcacctctaccag
caggttgcatcccaggatgtggctttcagttcgctcttctttaaggtggtcatgcagatg
ttgacctggctggagagctctgcactggaggcaggctcgcttagcaacctgctgaagtct
ttagtcgcacaatattctcacaagcaccacatcaccgatgtacgtacaggtttcctgcac
ctggccgaggcgctcgcatacaggcgggactcagaggtggctgtgaggggcgtcatcgcc
tcgctaagagctggagagaaatgcaacgccgagcctgaactcatcagaaaagttctacag
ggattaatggagggtaaaggctctggagtgtctacagtcccttcctacaggccctacctg
ctggctctgctcactcaccagtctaactggagcactttgcaccagtgcatcaccacactg
ctcaacaagcctaaagagcacaatgtggacccctcctcggctctggacttcctgtgggcc
tgcagtcacatccctcgcatctggcaaggcagagaccagaaaactccacagaaacacaca
gagaagtttgtcttgaagctgaccagtgaagagttgatcagtctggtagatctgatcctg
tgggagtcggagctgagctggcgagacacaggcaaagctgatgaaacactggaccaggcc
tcctgttctctcatccagtcccgcctgcccctgctgcacagctgctgccacagcgagccc
cagaatgtccacaccgtctgcgagtacctcctcaactgcatcaagaagtggggggacagt
gtgatgagcaggaggtgtgagaacctgctgctgcagatatacctccagttccccgaggtc
attcagcacgtgcgtctgcccgaggcgacactgagcggagaggccgccgccgacggaagc
acctgcaagctggacatcttggtgcatcgtctcatcacacttatggcagacactggagag
tccaaatcggcagagagtcgggtgtccgatgctacgctggcctgcaggaggctggctgtg
tcccaccctgtacttctgctcagacacctgactatggtcgctgctctcttgcatggccgg
atccatctgaacctgcaggagttcaggcagcagcaccatctgaccttcttcagtgatgta
ctggctatactggagttactgcagccgcgagtctttcacccagaccaccagagggcgctg
caggactgcttgctgtccttcattaaagtcctacagaacttcagaagattatcccgtatg
ccggtcattaacaagtttgtgcagttcattcagaaatacattactcatgacgcagcagct
gccgtgccttttcttcagaagcactctgatattctacaggctcttgcctcggagaatccc
gacctggtgcagctgaaatccctgctagctggtctcactctgcctgtaaagaccggctcc
tcagacatcactgccgaggacagagatgctgaggactcctcctcgggctccttgcctctg
gtcagtatctccgcctccacagcactcagctcagcggatatgaccaagtacctgaagaag
atctccggaggggaagccattgaagatgtgttggacgtcttgactgagctggatgagaag
tcgaagaggaatccagaaataatccagtattttgtgaatgatctacagagattgatgagc
tcgccagaggaactgtgtcgcaacatggcctttagtctcgcgctgcgctgcattcagaac
actcccagcctggcgtcagatttcctgcccaccttcatgtactgcatgggcagtgggaac
tttgacgttatccaaacagccctgaggaaccttccagaatatgtgctcctctgccaagag
cacgctgacattcttctccataaagccttcctcgtggggatctatggccagatagacacc
agctctgtgatcgcagagtccatgaaggtcctgcacatggaggctacaacatag
DBGET
integrated database retrieval system
