Pangasianodon hypophthalmus (striped catfish): 113537298
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Entry
113537298 CDS
T05759
Symbol
nthl1
Name
(RefSeq) endonuclease III-like protein 1 isoform X1
KO
K10773
endonuclease III [EC:3.2.2.-
4.2.99.18
]
Organism
phyp
Pangasianodon hypophthalmus (striped catfish)
Pathway
phyp03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
phyp00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
113537298 (nthl1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
phyp03400
]
113537298 (nthl1)
Enzymes [BR:
phyp01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
113537298 (nthl1)
DNA repair and recombination proteins [BR:
phyp03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
113537298 (nthl1)
Prokaryotic type
113537298 (nthl1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HhH-GPD
HHH
RecR_HhH
Motif
Other DBs
NCBI-GeneID:
113537298
NCBI-ProteinID:
XP_026787517
LinkDB
All DBs
Position
Unknown
AA seq
494 aa
AA seq
DB search
MFWAARAVCACTPQTHQYSGNKLIIIIIKPMKTSSRYFSSDGKVVADLSQADTAARTFQK
GGALRRLRRRMVEERSSAGIKEEPDEECTISQTEGSPHGHCGSEKPKVTAEPKEDPGEGH
APSRSSRTLRRGHVKVEYEDKAGLCVKKERWEPPDWRRQLSFIREMRSGRDAPVDQMGAE
KCYDPQAPPEVMRYQVLVSLMLSSQTKDQVTAAAMERLRAHDLSVTSILKMDEDKLGKLI
YPVGFWKTKAKYLKQATEMIHREFGGDIPDTLEGLVRLPGVGPKMAHLAMAIAWNRISGI
GVDTHVHRISNRLGWTRATTKNPEETRRALEEWLPRDLWSEINWLLVGFGQQVCLPISPL
CATCLNQDTCPSAHTASPTRRPKPGSPLSPREPATLRKNPEMKLEASTLQIKEEPFTVPL
CVSRPQQKRDRGRVDVPAKVTEPRKDRKERRDESQQEDKTGVKTRTGRRKEEKRDGEKTA
SCPRVQRRTTARKR
NT seq
1485 nt
NT seq
+upstream
nt +downstream
nt
atgttttgggcggctcgtgctgtttgcgcgtgcacacctcagacacaccaatactcaggg
aataaattaataataataataataaagccaatgaaaacgagctcgcgatatttcagcagt
gatggaaaagtcgtggcagatctttcacaagctgatacagcagccagaactttccagaaa
ggaggagcactcaggagattgaggcgcagaatggtggaggaaagaagttctgcaggaatt
aaagaagaaccagatgaggaatgtaccatttctcaaacagaggggtctccacatgggcat
tgtggttcagaaaagccaaaagtcacagcagaacctaaggaagaccctggggaaggccac
gccccttcaagatcatctcgcaccttgaggaggggccacgttaaagtggagtatgaagac
aaggcgggactctgcgtcaagaaagagcgctgggagccgcctgattggaggaggcagctg
tccttcatcagggagatgcggagtggacgggacgctccggtggaccagatgggggcggag
aagtgctacgaccctcaggctccgcccgaggtgatgcgttatcaggtgttggtctctctg
atgttgtccagtcagacgaaggatcaggtgacggctgcagccatggagcgactgcgtgca
cacgacctcagcgtgacctccatcctcaaaatggacgaggacaaactgggcaaactgatc
taccccgtgggcttctggaagacgaaggcgaagtatctgaagcaggcgacggagatgatc
caccgtgagtttggaggtgatatccccgacacgctggagggtttggtgcgtctgcccggg
gtcggccccaagatggcgcacctggccatggccatcgcctggaaccggatctccggcatc
ggagtggacacacacgttcaccggatctctaacagactgggatggactcgtgccaccacc
aagaacccagaggagacccgtcgagcgctggaggagtggctcccaagagatctgtggagt
gagataaactggctgttggtgggtttcgggcagcaggtctgtttacccatctcaccttta
tgcgccacctgtctgaaccaggacacctgtccctccgcccacactgcctcaccaacccgc
aggcccaaacctggctctccgctgtctcccagggagcctgctacactgcgaaagaaccct
gaaatgaaactggaggcgtcgacgctgcagatcaaggaggaacccttcaccgttcctctc
tgtgtgtctcgtccacaacagaaaagggacaggggcagagtggacgtgccagccaaggtg
acggagccaagaaaagacaggaaagagcgaagagatgaatcgcagcaagaggataagaca
ggggtcaagacgaggacgggaaggagaaaggaagagaagagagatggagagaagactgca
tcgtgtcctcgggtacagagaagaaccacagcgcgtaaacgctga
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