Pangasianodon hypophthalmus (striped catfish): 113537802
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Entry
113537802 CDS
T05759
Symbol
ret
Name
(RefSeq) proto-oncogene tyrosine-protein kinase receptor Ret isoform X1
KO
K05126
proto-oncogene tyrosine-protein kinase Ret [EC:
2.7.10.1
]
Organism
phyp
Pangasianodon hypophthalmus (striped catfish)
Pathway
phyp04010
MAPK signaling pathway
phyp04020
Calcium signaling pathway
Brite
KEGG Orthology (KO) [BR:
phyp00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
113537802 (ret)
04020 Calcium signaling pathway
113537802 (ret)
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
phyp01001
]
113537802 (ret)
Enzymes [BR:
phyp01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.10 Protein-tyrosine kinases
2.7.10.1 receptor protein-tyrosine kinase
113537802 (ret)
Protein kinases [BR:
phyp01001
]
Receptor tyrosine kinases (RTK)
RET family
113537802 (ret)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PK_Tyr_Ser-Thr
RET_CLD3
Pkinase
RET_CLD1
RET_CLD4
RET_CRD
Cadherin
Cadherin_FAT4_N
RIO1
Pkinase_fungal
ABC1
Motif
Other DBs
NCBI-GeneID:
113537802
NCBI-ProteinID:
XP_026788252
LinkDB
All DBs
Position
Unknown
AA seq
1114 aa
AA seq
DB search
MGRTRAFTLWGDTVLLLLLLWEGSWGLYFPQSTYSESIYVGQAAGTPVLQVHAMQERASE
QPYFCLYWRRLQKSAPYASWFYIDAVTGVIYMNKTLDWTDFESISSSWFAHAKRLTLKVT
AAPMSQKILCAQFPNAEVSLTFFNATAPTCGQMKIEKLCFPDRDINPHIKENRMPGPLRQ
LRRFTHADLCPNYNISYRVKPESPVPFIVNDSTSELVVTAPLDREEKEVYRLILTCLVQT
EKELFTNFTPLHISIYDEDDSPPYVNGTDTEDVLIEFSRNKGAAFGDLFVYDRDTTSTYH
KEQSQNKYVWTLLTNDSWIKDTFTIQQNFSEEKPIFGNVRGTVYKYKLRLIRNISVDEKR
SFQLDYLVNDTTFRGPEGTVMLHFNVTILPVSISFSNITYFYVLCRKSMTYSQIGEVCVD
NCLKFKGIEIAYHLELSDRNISANVQSCYTAVDVARNLEDMSGVLYVNDTEPLRRPECQE
LQYVLVAHEQHKQLQAKTLVIIIFEGEADPLRTDGQRSLACAEKRQRGECETFSGLGTPT
GRCQWRQGTEKVISENYSTCSPDLRTCPDGYCDVIESKNISICPQDCTREPIIGGHERGL
MLGIKAGHGTCYCYLEKCFCEQDDMEEAICDDMCKTVIATAVLLSFIVSILLSSYFIHRY
HKSTPKPPIASAEMTFRRPAQSYPISYSANNVRRGSLDSMENQVAIDTFKIPEDPKWEFP
RKNLVLGKTLGEGEFGKVVKATAFRLKGKAGYTTVAVKMLKENASHSELRDLLSEFTLLK
QVNHPHVIKMYGACSQDGPLYLIVEYAKYGSLRNFLRESRKVGPSYMGSDANRNSSYLEN
PDERALTMGDLISFAWQISRGMQYLAEMKLVHRDLAARNVLVAEGRKMKISDFGLSRDVY
EEDSYVKRSKGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEIVTLGGNPYPGIAPERL
FNLLKTGYRMEKPENCTEEMYSLMLRCWKQEPDKRPTFSEISKELEKMMVKSRDYLDLAA
STPADALLYDDTLSEEDTPLVDCNNAPLPRTLPSTWIENKLYGMSYPNWPEKSPVLLNRL
DATNPEFTRYANDSVYANWMALPSPAKIMDKLDS
NT seq
3345 nt
NT seq
+upstream
nt +downstream
nt
atgggtaggacgcgggcttttacgctgtggggagacaccgtcctgctcctcttgctcctc
tgggaaggctcctggggactgtactttcctcagtccacatactcagagagcatctatgtt
ggccaggcagcaggtacaccagtgctgcaggtgcacgccatgcaggagagagcttcagag
cagccatacttctgcctgtactggaggaggctccagaaatctgctccttatgcatcatgg
ttctacatcgacgctgtcactggagtgatctacatgaacaaaactctggattggactgac
tttgagtcaatatctagcagctggtttgcgcacgcaaagaggttgaccctgaaagtgaca
gcggcccccatgtctcagaaaattctgtgtgctcagttccctaatgcagaggtcagtctt
acattcttcaatgccacagcgcccacctgtggccagatgaagatagagaaactgtgcttc
cctgatcgggatataaacccccacattaaggagaaccgcatgcctggacctctgcgccag
cttcgtcgctttacccatgctgacctctgccccaactacaacatcagctacagggtgaaa
ccagagtctccagtgccgtttatagtcaatgactccacatctgagctggtagtcacagca
cctctagaccgtgaggagaaggaggtctatcgtctgatattaacatgtttggtgcagaca
gaaaaggaattgttcactaattttactcccctgcatatcagtatatatgatgaggatgac
agtcccccttatgtgaatggcacggacactgaggatgtgcttatagaatttagccgcaat
aagggagcagcatttggcgatctgtttgtgtacgacagagacacaacttctacctatcac
aaagaacagagccagaataagtatgtatggacactactgactaatgactcctggattaaa
gacacatttaccattcaacagaacttcagtgaggaaaagcccatcttcggcaacgtgcga
gggacagtctataagtacaagttgcgtctcatcaggaatatttcagtggatgagaagcgc
tcatttcagttggactacctggtcaacgacactacgtttcgaggccctgagggaactgtg
atgctgcattttaatgttaccattttgccagtttctattagcttcagtaacatcacctac
ttctacgtgctgtgtcggaagtccatgacctactcccagattggtgaagtatgtgtggac
aactgcctgaagttcaagggtattgaaattgcataccatttagagttgagtgacaggaac
atctcggctaatgttcagtcctgctacacggcagttgatgtggcacggaatctggaggac
atgtctggagttctctatgtaaacgacacagagccactgcgcaggcctgaatgtcaggag
ctacagtatgtgcttgttgctcatgagcagcataagcagcttcaggcaaaaacactagtc
atcatcatttttgaaggcgaagcggatcctttaaggacagacggacagcgttccctggcc
tgtgcagagaagagacagcgtggggagtgtgagacattcagcggcctgggaactcccact
ggaagatgtcagtggagacaaggcacagaaaaagtgatatcagaaaattactccacttgt
tctccagacctgcgtacatgtccagatggctactgtgatgtgattgaaagcaaaaatata
tccatatgtcctcaggattgcacccgtgagccaattattggaggccatgagagaggcctg
atgcttggcattaaggcaggacatggaacctgctattgctatttggagaagtgtttctgt
gagcaggatgatatggaagaggcgatatgcgatgatatgtgtaagactgtcatagccact
gcagtccttctctcgttcatcgtctccatcctcctctcctcctacttcatccatcgttat
cacaagagcacccctaaaccacccatcgcttcagcagagatgactttccgcaggcctgcc
cagtcctatcctatcagctactctgccaacaatgttcgacgaggttcactggactccatg
gaaaaccaggtggccatcgacaccttcaagatacctgaggatccaaaatgggaattccca
cgaaagaatctagtcctgggtaaaactctcggagagggagagtttgggaaggttgtaaaa
gcaacagcattccgccttaaaggaaaggcaggatacactacagtagctgtaaaaatgttg
aaagaaaacgcctctcacagtgaacttcgtgaccttttgtcagaattcaccttgcttaag
caggtcaaccatccacacgtaataaaaatgtacggagcttgtagccaggatggtcccctg
tatctgatcgttgaatatgccaagtatggatcactgcgaaacttcctgagagagagccgg
aaagtggggcccagctatatgggtagcgatgccaaccgtaactccagctacctcgagaat
ccagatgaaagagctctaaccatgggagacctcatctcgttcgcctggcagatctccaga
ggaatgcaatacctggctgaaatgaagcttgttcatagagatcttgcagcaaggaatgta
ctggtagcagagggcaggaagatgaagatttcagactttggtttgtctcgggatgtctat
gaggaagattcctatgtgaagaggagcaagggtcgtattccagtcaaatggatggctatt
gagtccttgtttgaccatatatataccacacaaagcgatgtctggtcttttggtgtgctg
ttatgggaaatcgtgaccctgggtggaaacccgtacccaggcattgcgcctgagcgactc
tttaatcttctcaagactggctacaggatggaaaaaccagagaactgcactgaagaaatg
tatagtctgatgcttcgctgctggaagcaagaaccagataagagaccaaccttcagtgag
atcagcaaagagctggagaagatgatggtgaaaagcagagactatctggatttggcagct
tccactcctgcagacgccctgctatatgatgacactctgtctgaagaggacactcctcta
gtggactgtaataacgcccctctccctcgaaccctcccttccacttggattgaaaacaag
ctctatggcatgtcatacccgaactggcctgagaagagcccggtactgctcaacagactt
gatgcaactaatccagaatttacaagatatgccaatgatagtgtttatgcaaactggatg
gctttgccttctcctgcaaaaattatggacaagcttgatagttaa
DBGET
integrated database retrieval system
