Pangasianodon hypophthalmus (striped catfish): 113538129
Help
Entry
113538129 CDS
T05759
Symbol
rnf123
Name
(RefSeq) E3 ubiquitin-protein ligase RNF123
KO
K12169
Kip1 ubiquitination-promoting complex protein 1 [EC:
2.3.2.27
]
Organism
phyp
Pangasianodon hypophthalmus (striped catfish)
Brite
KEGG Orthology (KO) [BR:
phyp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
phyp04121
]
113538129 (rnf123)
Enzymes [BR:
phyp01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
113538129 (rnf123)
Ubiquitin system [BR:
phyp04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
113538129 (rnf123)
Multi subunit type E3
KPC complex
113538129 (rnf123)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TPR_RNF123
SPRY
zf-C3HC4_3
zf-RING_2
zf-C3HC4
zf-C3HC4_2
Motif
Other DBs
NCBI-GeneID:
113538129
NCBI-ProteinID:
XP_026788800
LinkDB
All DBs
Position
Unknown
AA seq
1298 aa
AA seq
DB search
MSSKGGGTALTRRNYRLASDTDKPKATGIVNEKLLSDYLHHVFPASSTHGPASATYRKPL
TFQDLGTHLEKLLSEDEAAEDSTDHTDGRLGPSTVVLDHTSGFEGLLFVDDDLLGVIGHS
NFSSIRATTCVFKGKWMYEVLISSQGLMQIGWCTLNCRFNQEEGVGDTPDSYAYDGNRVR
KWNVTTTNYGKSWAAGDIVSCMIDLDEGTITFCLNGQSLGTAFNNIKMGPGIAYFPAISL
SFKESVAFNFGSRPLRYPVEGYHPLQDPPTADLINAKRLLGYMKNVMSTGIDTQEEKLIE
RDIASWQLQGEPTVLVTLAHIFNYFAPLMCKVYLVEDVLMSFLLGILEGGGSVDEHPLIQ
QLLELFWLLMEDFEVNECLKQLMMSLLRAYRFSPIIPDLGFQIHYLRLTTAILRHEKSRK
YLLSNVLFDVLRSVVFFYIKTPLRVKEAGLEELIPTTWWPTHFDKEGKDEKDPRHESAEE
RLRRRAYERGCQRLKKRIEVVEELQVQILRLMLNNKDKGTGEASRYIFLNKFRKFLQENA
SNRGNPTVLCPPEYMVCFMHRLITAIRSYWDEGKRKRPGAISSEDAYVPPQLFYNGKVDY
FDLQRLGGLLSHLKKTLKDDLAAKANIIIDPAEIQAASMDDLDEDDESGAAQRPSGAAAM
GGALARPSWLSSPTLGRANRFLSTAAVSLMTPRRPLAPPEKVKVRTLPVEQRTEEDIEGS
HGNDGLLLGRPLEEPEQPITEKSLLEILDGIVMMYNLSVHQQLGKMVVVSDDVHEYAVAL
KDTEEKIARCPGRRADILEELQKSQKVFAEKLDHLSRRLAWINATIYSKEKMLDVYWLLR
VCIRTIEHADNTGSLFAFTPEFYLNVAMNSYSALKNYFSPSNSMEELPGYEDTLTQLAAI
LAKHFADPRIVGTDIKDSLMQALASYVCYPHSLRAVERISEEQRVAMMRNLLAPYEQRPW
AQTNWILVRLWRGCGFGYRYTRLPHLLKTKPEDANLPSLQKPCPSLLLQRHMAELLNQDK
EMAASFLNSVLNQLNWAFSEFIGMIQEIQQAAERPERNFVDTRQLKVCATCFDLSVSLLR
VLEMTVTLVPEIFLDWSRPSAELLLRRLAQLLNQVLNRVTAERNLFDRVVNLRLPGLESV
DHYPILVAVTGILVRVLVDSERQGIAKAASVLLSDPCFQLHSIQHLLGRGEASAGADNKH
FSLHSYTDYITAEEAQKVEKMLAFLTEESKQAAATTAPTSEDDLCPICYAHSISAIFKPC
SHKSCKACINQHLMNNKDCFFCKATITGVEDYSKPAGS
NT seq
3897 nt
NT seq
+upstream
nt +downstream
nt
atgagttcaaaagggggcggtacagccctgacccgacgaaattatcgcctggcatcagat
acagacaaacccaaagccacaggtattgtgaatgagaagttgttgagtgactacctgcac
catgtcttccctgcctccagtacacacggtccagcatcagcaacctacagaaaacccttg
acgttccaggacctcggcactcacctggagaagctgctgtccgaggacgaggctgctgag
gacagcacagatcatacagatgggcgactcggaccctctaccgttgtcctggaccacacc
agtggattcgaaggcctcttatttgtggatgatgatcttttaggagtcattggccatagc
aatttcagttcaataagggctacaacctgtgtattcaaagggaaatggatgtacgaggtg
ctgatctcgtctcaaggtttgatgcagataggatggtgcacgctgaactgcagattcaac
caggaggagggagttggagacactccggactcgtatgcgtacgatggtaatcgggtcaga
aagtggaacgtgacaaccaccaactatggcaaatcgtgggctgcaggggacatcgttagc
tgcatgatagacctcgatgaaggaacaattactttttgtctgaatggacagtcccttggt
acggctttcaataatattaaaatgggtccagggattgcctacttccccgcgatcagtctt
tcattcaaagagtctgtggcctttaacttcggcagccgcccactcaggtatcctgtggaa
ggctatcatccccttcaggaccctccaactgctgacctcatcaatgccaagaggctgctg
ggatacatgaagaacgtgatgtccactggtatagacacacaggaggagaagctcatcgag
agggatattgcatcctggcagcttcaaggagagcccactgtcctggtcacgctcgcacat
atcttcaattacttcgctcctctcatgtgtaaagtgtacctggtggaagacgtcctgatg
agcttcctgctgggtattctggagggcggcggctctgtggatgaacatccgctaatccag
cagctgctcgagctcttctggctgctcatggaggactttgaggtgaatgagtgcctgaag
cagctgatgatgtcgttgctcagggcataccgcttctcacccattatccctgaccttggc
ttccagattcactatctgcgcttgacaaccgccattttacgccatgaaaagtctagaaag
tacctcctaagcaatgtattattcgacgtgctgcgctctgtggtgtttttctacatcaag
actcctctgagggtgaaggaggccggtttggaggagctcatccccaccacatggtggcca
acacacttcgacaaagagggtaaggacgagaaggacccgagacatgagagcgcagaggag
agactcaggcggcgagcgtatgaacgtggctgtcagagactcaaaaagaggatcgaagtg
gtggaggagctgcaggttcagatcctgaggctgatgctaaataacaaggacaaagggacg
ggcgaagcctctcgatacattttcctcaacaaattccgcaagttcctgcaggagaacgca
agcaaccgagggaacccaacagttttgtgccctcctgagtacatggtgtgcttcatgcat
cgactcataacagcaatcaggagctactgggacgaagggaaacgcaagaggccaggagcc
attagcagtgaagacgcctacgtccccccgcagcttttctacaacgggaaggtggactac
tttgacctgcagcgcctcggagggctgctctctcatctcaagaaaacgctgaaagatgac
ctggcagctaaagccaacatcattatcgaccctgcggagatccaggccgcttctatggac
gatctggacgaggatgatgaaagtggagcagctcagaggccgtctggtgcagcggcgatg
ggcggagctttggccaggccgagctggctgagttctcccacactgggccgagccaatcgt
ttcctcagtacggccgcagtcagcctcatgaccccacggcgacctttggccccgcctgaa
aaggtcaaagtgcgcactctgcctgtggaacagaggacagaggaggacatcgagggaagc
catggtaacgatgggctgttgctggggcgaccgttggaagagcccgagcagccaatcacg
gagaagtccctgctggagatcctggatgggattgtgatgatgtacaacctgagtgttcat
cagcagctgggcaagatggtggttgtgtcggatgacgtccacgagtacgccgtcgctctg
aaagacacggaagagaagatagcccgatgtccaggaagaagagcagacattctggaggaa
ctgcaaaagagccagaaagtgtttgctgagaagctcgaccacctgagccgcaggttggcc
tggatcaacgccaccatttactccaaggagaagatgctagatgtctactggctcttgcgt
gtgtgcatccgcaccatcgagcacgccgacaacacgggctccttgtttgccttcacccct
gagttctacctcaacgtggccatgaatagctacagtgcccttaagaattacttcagccct
tccaacagcatggaggagctcccaggttatgaggacacgctcactcagcttgctgctatc
ctcgctaagcactttgcagacccgcgcatcgtgggcacagacattaaagattcactgatg
caggctctggccagctacgtgtgctacccacattcactcagagctgtggagaggatctct
gaggagcagcgggtggctatgatgaggaacctgttggcgccgtatgaacagcgaccgtgg
gctcagactaactggatcctcgtccgcttgtggaggggttgtgggtttggctacaggtac
acacggctgcctcacctgctcaaaaccaaacccgaggatgccaaccttcccagcctgcag
aagccttgtccatcactcctgctccaaaggcatatggcggagctcctgaatcaggacaaa
gagatggctgctagcttcctcaacagcgtcctcaaccagctcaactgggccttctcagag
ttcattggcatgatccaggagatccagcaggcagcagagcgtccagagcgtaattttgtg
gacacgaggcagctgaaagtgtgtgccacgtgcttcgacctgtctgtcagtctgctgcgt
gtgctggaaatgaccgtcaccttggtacccgagatcttcttggactggagccgaccctca
gccgagcttctgctccgtcgcttggctcagctcctaaaccaggtgctgaatcgagtcacg
gctgagaggaacctcttcgaccgcgtggtcaaccttcggctcccagggctggagagcgtg
gatcattaccccatactggttgcagttacgggaattctggtgcgagtcctggtcgactcc
gagagacaggggatcgctaaggctgcctcggtgctgctgtcagacccgtgcttccagctt
cactctatccagcacctgctgggacggggagaggccagtgctggagcagataacaaacac
ttctcactacactcttatacagactacatcactgcagaggaagcacagaaagtggaaaag
atgctggctttcctgaccgaggagtccaagcaggctgcagccacaacagcgcccaccagt
gaagacgacctgtgtcccatctgctatgcacactccatatcagccatcttcaagccctgc
tcccataaatcctgcaaagcctgcatcaatcaacatttgatgaataataaggactgtttc
ttctgcaaggctacgatcactggagtggaagattacagcaaacctgctggctcttag
DBGET
integrated database retrieval system
