KEGG   Pangasianodon hypophthalmus (striped catfish): 113539160
Entry
113539160         CDS       T05759                                 
Name
(RefSeq) tumor necrosis factor-like
  KO
K03156  tumor necrosis factor superfamily, member 2
Organism
phyp  Pangasianodon hypophthalmus (striped catfish)
Pathway
phyp04010  MAPK signaling pathway
phyp04060  Cytokine-cytokine receptor interaction
phyp04150  mTOR signaling pathway
phyp04210  Apoptosis
phyp04217  Necroptosis
phyp04350  TGF-beta signaling pathway
phyp04620  Toll-like receptor signaling pathway
phyp04621  NOD-like receptor signaling pathway
phyp04622  RIG-I-like receptor signaling pathway
phyp04625  C-type lectin receptor signaling pathway
phyp04920  Adipocytokine signaling pathway
phyp05132  Salmonella infection
phyp05168  Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:phyp00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   04010 MAPK signaling pathway
    113539160
   04350 TGF-beta signaling pathway
    113539160
   04150 mTOR signaling pathway
    113539160
  09133 Signaling molecules and interaction
   04060 Cytokine-cytokine receptor interaction
    113539160
 09140 Cellular Processes
  09143 Cell growth and death
   04210 Apoptosis
    113539160
   04217 Necroptosis
    113539160
 09150 Organismal Systems
  09151 Immune system
   04620 Toll-like receptor signaling pathway
    113539160
   04621 NOD-like receptor signaling pathway
    113539160
   04622 RIG-I-like receptor signaling pathway
    113539160
   04625 C-type lectin receptor signaling pathway
    113539160
  09152 Endocrine system
   04920 Adipocytokine signaling pathway
    113539160
 09160 Human Diseases
  09172 Infectious disease: viral
   05168 Herpes simplex virus 1 infection
    113539160
  09171 Infectious disease: bacterial
   05132 Salmonella infection
    113539160
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04052 Cytokines and neuropeptides [BR:phyp04052]
    113539160
   00536 Glycosaminoglycan binding proteins [BR:phyp00536]
    113539160
Cytokines and neuropeptides [BR:phyp04052]
 Cytokines
  Tumor necrosis fators
   113539160
Glycosaminoglycan binding proteins [BR:phyp00536]
 Heparan sulfate / Heparin
  Cytokines
   113539160
SSDB
Motif
Pfam: TNF Cpta_toxin Gemini_mov Tmemb_185A DUF4381
Other DBs
NCBI-GeneID: 113539160
NCBI-ProteinID: XP_026790537
LinkDB
Position
Unknown
AA seq 247 aa
MENYKGTAADIEAAIGDVYQPTVEAVKPSRSWMWTIVGAVVFLSLCAVASLCFAWHFTNK
NQGELFLKQQSNTSTGSSSQQKILTQIAKSTKAAIHLHVSNQPHKKRSPVWVSGVDQSFT
KGGLKLEDNNIVIPHDGLYFVYSQASFHIICKSSEEDNDSSNMHLSYRILWSSLTAPSKN
KRYLLHGVKSVCQTKTEEQMNGQPVYDSIYLGAIFQLYKGDKLSTEANHLVGIDVHSAKT
FFGVFEL
NT seq 744 nt   +upstreamnt  +downstreamnt
atggagaactacaaggggacagcagccgacatagaagccgctattggagatgtttaccaa
cctactgtggaagccgtgaagccatccagatcttggatgtggacgatagttggtgctgtg
gtcttcctttccctctgtgctgtagcatctctctgttttgcatggcatttcacgaataag
aatcaaggcgagcttttcctgaagcagcaaagcaacacaagcacaggttcatcaagccag
cagaaaatactaacacagatcgccaagagtacaaaggcagccattcacctccatgtttca
aatcagccccacaagaaaaggtctccagtctgggtgagtggagtggaccagtccttcact
aaaggaggcctcaagctggaggacaacaacatcgtcattccccacgatggcctgtacttt
gtctacagccaggcatcattccacatcatctgcaagtcaagtgaggaagataatgacagt
agcaacatgcatctgagctacagaattctctggtcatctctcacagcaccatccaaaaat
aaacggtatctgctccatggagtcaaatccgtgtgccaaaccaaaacagaggaacagatg
aatggacagcctgtctatgattccatctatcttggcgccatctttcagctttataagggg
gacaaactgtcaacggaggccaaccatcttgttggcatcgatgtacacagtgccaagacc
ttttttggggtgtttgagctgtga

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