Pangasianodon hypophthalmus (striped catfish): 113539945
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Entry
113539945 CDS
T05759
Name
(RefSeq) nectin-4-like
KO
K06593
poliovirus receptor-related 4
Organism
phyp
Pangasianodon hypophthalmus (striped catfish)
Pathway
phyp03265
Virion - Ebolavirus, Lyssavirus and Morbillivirus
phyp04520
Adherens junction
Brite
KEGG Orthology (KO) [BR:
phyp00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03265 Virion - Ebolavirus, Lyssavirus and Morbillivirus
113539945
09140 Cellular Processes
09144 Cellular community - eukaryotes
04520 Adherens junction
113539945
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
phyp04515
]
113539945
Cell adhesion molecules [BR:
phyp04515
]
Immunoglobulin superfamily
Nectin family
113539945
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ig_3
I-set
V-set
Ig_2
ig
C2-set_2
Protocadherin
DUF5305
EzrA
TMEM154
DUF7237
ECSCR
EphA2_TM
DUF1180
V-set_CD47
Adeno_E3_CR2
Motif
Other DBs
NCBI-GeneID:
113539945
NCBI-ProteinID:
XP_026791885
LinkDB
All DBs
Position
Unknown
AA seq
632 aa
AA seq
DB search
MAVLSCLRILLIWNLLVCVNGGTFVKPPSSTVYTSAEEDVLLPCKFMPSEGEVIVQVIWM
HIKPDGTEEQIITAHRVEGQLESPAYAGRVRFEDSDPIENSALIILKTELSDEGRYTCSI
TTFPSGSVKTQVSLTVWTKPISTLDPIILVEGQSFRLAATCRAVAKPQPGLSWDTDLPGQ
SQNRTLDNGVASIQYSLHPLRSMNMRKLDCLVWHPSLKSPKRLTNNLVVHYPPDATISGY
DENWYVGLEGARLQCDGGGNPKPHNFTWTRKDGGLPDGVTMEKEVLRFDRPLRLTDKGAY
ECVASNIVGSGRVEVKIEVTEEPKNPTSFDSLLLIIIGGISGMVVLILVIVVITVNRHHK
RKNRQLAMELDEKKEEISTLSRQASIRRVVSTSIDNKYQMEENIPLRVEGTIRTSLSSLD
RPRSRDSHSTLGGLDSLGRPAIFNTSRRGRERTMDREKDGERVPSRLKMEPYARNCDPSL
LHPESHFHPPLQPSTFPMEQTAEIIRSRNGSAILPADGRPQSGGSITGSRAGSRGHHSPL
NSTYPILTDDEDMRPADEESELSRGQIEPDGMDNGGSETTSSQISEAMSNHFEHTNGTLW
PKSKPNNILLAPETTRLPPLHSNMIHHTPQIV
NT seq
1899 nt
NT seq
+upstream
nt +downstream
nt
atggcagtgttgagttgtttgaggattttacttatctggaatttgttggtctgtgtaaac
ggaggaacatttgtgaaacccccaagctcaactgtgtatacatcagcagaagaagacgtg
cttctgccctgtaagttcatgccatcagaaggagaggtgatcgttcaggttatctggatg
cacattaagccagatgggactgaagagcagatcataactgctcatcgtgtggaaggacag
ctagaatctcctgcttatgcaggccgtgtgcgctttgaagacagcgaccccattgaaaac
tctgctttgattatcctgaagacagagctttcagacgagggacgctatacctgtagcatt
actacattccctagtggaagcgtaaagactcaagtgtctcttactgtgtggactaaaccc
atctccacattggaccctattattctagtggagggtcagtcatttcggctggctgccacg
tgccgtgcagtggctaagcctcagccgggtctctcatgggatacagatctgccaggccag
agccagaaccgcactctggacaatggcgtcgcttccatccagtactccctccaccctctg
aggagtatgaacatgcgcaaactggactgtctggtctggcacccatctctaaaaagtccg
aagaggctcactaataaccttgtagtgcactaccctccggatgcaacaatctcgggttat
gatgagaactggtatgtgggtctggagggtgctcgactccagtgtgacggaggaggaaac
cccaaaccacacaatttcacctggaccaggaaagatggcggtttaccagatggcgtgacc
atggagaaggaagtattgcgatttgacaggcctcttagattaacagacaagggagcgtat
gaatgtgtagcctccaatattgtggggtctgggagagtggaagtgaaaatagaagtaaca
gaggaaccaaaaaatccaacatcattcgacagcctcctgctgatcatcataggaggaatt
tcagggatggtggtgcttattctagtgattgtagtaataacagtaaaccgacatcacaaa
cgaaaaaacagacaactggctatggagctggatgagaaaaaggaagaaattagcactcta
tccagacaggcctcgatcagaagagttgtctcaaccagcatagataataaataccagatg
gaggagaacataccattaagagttgaaggaacaatccggaccagtctcagttcactggac
cgtccccgctctcgagacagtcattccactttaggaggactagactctctgggacgacct
gccatttttaacacatccagacgaggcagggagcgaacgatggacagagagaaagatgga
gagagagttcccagtcgactgaaaatggagccttatgccaggaactgcgatccatcgctg
ctgcatccagagagccatttccaccctcctctacagccttccacttttccgatggagcag
actgctgaaattatcagatctcggaatggcagtgccattctaccagcagatggcagaccg
cagtcaggaggcagcataactggcagtagagcaggcagcagaggacatcattcaccctta
aattcaacctaccccatacttacagatgacgaagacatgaggccagctgatgaagagtca
gagctttccaggggccaaatagaacctgacggtatggataacggaggcagtgagactaca
agctcgcaaatatctgaggcaatgtccaatcactttgagcatactaacggtacactatgg
cctaagtcgaaacccaacaacatcttactagcaccagagaccactcgattaccccctctc
cattcaaacatgatccatcacacgcctcagattgtgtag
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