Pangasianodon hypophthalmus (striped catfish): 113540920
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Entry
113540920 CDS
T05759
Symbol
nr1h3
Name
(RefSeq) oxysterols receptor LXR-alpha isoform X1
KO
K08536
liver X receptor alpha
Organism
phyp
Pangasianodon hypophthalmus (striped catfish)
Pathway
phyp03320
PPAR signaling pathway
phyp04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
phyp00001
]
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
113540920 (nr1h3)
09150 Organismal Systems
09152 Endocrine system
03320 PPAR signaling pathway
113540920 (nr1h3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
phyp03000
]
113540920 (nr1h3)
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
phyp03310
]
113540920 (nr1h3)
Transcription factors [BR:
phyp03000
]
Eukaryotic type
Zinc finger
Cys4 thyroid hormone receptor-like
113540920 (nr1h3)
Nuclear receptors [BR:
phyp03310
]
1. Thyroid hormone like
1H. Liver X receptor like receptor
113540920 (nr1h3)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Hormone_recep
zf-C4
Motif
Other DBs
NCBI-GeneID:
113540920
NCBI-ProteinID:
XP_026793397
LinkDB
All DBs
Position
Unknown
AA seq
446 aa
AA seq
DB search
MMTTLSATDIADVGHGANLGCVTEEGSVSAAEVKHELHTSPSQPVSFTSSPKELSDTLHM
DPSDVKLDPSADTPAPEGQPVKRKKGPAPKMLGNEVCSVCGDKASGFHYNVLSCEGCKGF
FRRSVIKGAQYVCKNSGRCEMDMYMRRKCQQCRLRKCREAGMLEQCVLSEEQIRLKKMKK
QHEEEAARSSGVAAPSPAADIPPLAPEQQEMIEKLVAMQKQCNKRSFIDRRKVTPWPQSQ
DPMNREVRQQRFAHFTELAIMSVQEIVDFAKQLPGFLELTREDQIALLKTSTIEIMLLET
SRRYNPAIESITFLTPDFSYNKDDFAKAGLQIEFINPIFEFSKGMNDLHLDEAEYALLIA
INIFSADRPNVQDHDLVEKLQQPYVDALHSYIRIKRPNDHLMFPRMLMKLVSLRTLSSVH
SEQVFALRLQDKKLPPLLSEIWDVHE
NT seq
1341 nt
NT seq
+upstream
nt +downstream
nt
atgatgaccaccctttctgcgactgatattgctgatgttggtcatggggcaaatttgggg
tgtgtcactgaggaaggctcagtgagtgcagcagaagtgaaacatgaattacacacttct
cccagtcaacccgtttcattcaccagttctcccaaagagctgagcgacacgctgcacatg
gaccctagcgacgttaaactggatccctctgcagacacacctgcaccagagggccagcca
gtgaagaggaagaaaggtccagctcccaagatgttggggaatgaggtgtgtagtgtgtgt
ggagacaaggcctccggtttccactacaatgtattgagctgtgagggctgcaagggcttc
ttcaggcgaagcgtgatcaaaggagcacagtatgtctgcaagaactcgggccgctgtgag
atggacatgtacatgcgccgaaaatgtcagcagtgtcggctgcgcaagtgtcgggaggcg
ggcatgcttgagcagtgtgtgctttcagaggagcagattcggttgaagaaaatgaagaag
cagcatgaggaagaggcagctcgtagctcgggcgtggctgcaccgagcccagcggctgac
attccccctttggctccagaacagcaggaaatgattgagaagttagtcgccatgcagaaa
cagtgcaataaacgctccttcatcgaccggcgcaaagtcactccatggccacagagtcag
gacccgatgaaccgggaggtgcggcagcagcgctttgctcacttcaccgagctggcaatc
atgtcggtgcaggagatagtggactttgctaaacagctgcctggtttcctggagctcacc
cgtgaggaccagattgccctgctcaagacctccaccattgagatcatgctgctagagacg
tctcgccgctacaatccagcgatcgagagcatcactttcctcacgccagacttcagctac
aacaaggatgactttgccaaagcaggactgcagattgagttcattaaccccatcttcgag
ttctctaagggcatgaatgacttgcacctggatgaggcagagtatgcactgcttatcgct
ataaacatcttttcagcagaccgacctaacgtgcaggatcatgatttggtggagaagctc
caacagccatatgtagatgctctgcattcatacatcaggatcaagagaccaaatgatcac
ctgatgttcccgcgtatgctgatgaagctggtcagcctgcgcacactgagtagtgttcac
tctgagcaggtcttcgctctacgactgcaggacaagaaacttccgcctcttctgtctgaa
atctgggatgtccacgaatga
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