Pangasianodon hypophthalmus (striped catfish): 113541009
Help
Entry
113541009 CDS
T05759
Symbol
nod2
Name
(RefSeq) nucleotide-binding oligomerization domain-containing protein 2
KO
K10165
nucleotide-binding oligomerization domain-containing protein 2
Organism
phyp
Pangasianodon hypophthalmus (striped catfish)
Pathway
phyp04621
NOD-like receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
phyp00001
]
09150 Organismal Systems
09151 Immune system
04621 NOD-like receptor signaling pathway
113541009 (nod2)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04054 Pattern recognition receptors [BR:
phyp04054
]
113541009 (nod2)
Pattern recognition receptors [BR:
phyp04054
]
Cytoplasmic pattern recognition receptors
NOD-like receptors
113541009 (nod2)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
NACHT
LRR_NLRC3
CARD
NLRC4_HD2
LRR_TMOD-LMOD
LRR_6
WHD_NOD2
LRR_CARMIL
LRR_4
AAA_16
AAA_22
nSTAND_NTPase5
HTH_NLRC5
AAA_30
AAA_29
Sigma54_activat
nSTAND3
AAA_18
T2SSE
Motif
Other DBs
NCBI-GeneID:
113541009
NCBI-ProteinID:
XP_026793561
LinkDB
All DBs
Position
Unknown
AA seq
982 aa
AA seq
DB search
MCAQQLVLRQRTELLGALCCGGTAEPLDSVLDLLLSWDVLVWEDYHNVQGLSKPLCSKTR
DLLDLVYTKGEEACSLLLAAFDQVLPEAQKAGLYFGKGNSRRRDIKKTPTSTSEALLIDR
PALVKKVRDHLDGVLDALMEAGCFTSQDCDEVLLPVHTRSQKARKLLDQVRFRGEGAANA
LLQYLQQIDSKPQRVKDEKQLSAECHLYQKKLCSSVAAQSHFLSTYGGTGKFSLDDIYTD
GLLEVVQSDRAVTALGLQDVVGLLGTLNEEADTILISGEAGTGKSTLLQRLHLLWARSTL
LTDVLMLFPFSCRKLNAEQRILSLKELLFLHCCWPDRGQDEIFQFILDHPHLVLFTFDGL
DEFRQSFTDEGRHCCPTQQAPVHTLLFNLLQGTLMKGVKKVVTSRPQAVGPSLKRYLRKE
VLAKGFSPVGIDHFVRKHHNDATVATRVVESLKANTALLGLCHIPVFCWIISKCYKELLG
CGEGSPQTVTDVYFMVLKHFLQKRMPQKHSTLGKGWLQDHLETVRRLGQLALEGLETSCY
VFAESDLLKCGITEQDIGLGFLIHCKDLSDYTDCKHFEFLHITMQCFFAALYIVLNNNVN
CSVILNLFQSQCKQPTVLNHNCLVHCMKPVVDDCNVAEIPNLQITSEFVAGLLSQRYRSL
LVQSCPAGLLEKKSKQVMKCLSKGIQRHFKSIPPPVKGEKKSMHAMPSFVWLIKCIYEMQ
ESEIAKGAVAKLEVEHLKLIYCNIGPVECTALAYVLRYLQNPVGIQLDFNSVGDVGLEQL
LPCLHICHSLYLRNNNISDEGIRKLVEKGVHCECFEKVALFNNRLTDECTKHFALLLKTK
KNFLALRLGNNNITSQGAEQLAEGLRHNTSLMYLGLWGNKIGDKGAEALADALKDSTTLI
WLSLADNSVGSAGACALAELVKRSTTLKELWLNQNCISRDGVECLIEALKVSSTVKEVWL
RGNNLSAEEVKELSEQESRLIF
NT seq
2949 nt
NT seq
+upstream
nt +downstream
nt
atgtgtgcacagcagctggtgctaaggcagagaacagaactgttgggggcactgtgctgc
ggtggcaccgctgaacctttggattctgtgcttgacctgttgctgtcctgggacgtcctt
gtttgggaagactaccacaatgtccagggtctctctaaacccctctgctccaaaaccaga
gaccttctggacttggtgtacaccaaaggagaggaggcctgcagtctgctgctggcagct
tttgatcaagtcttacctgaggcccagaaagcaggactttactttgggaaaggtaattca
aggcgaagagacatcaagaagactcccacaagcaccagtgaggctttgttgattgacagg
ccagcactggtaaagaaggttcgggaccatctcgatggggtgttggatgctctgatggaa
gctggttgctttacttcacaagactgtgatgaagtgttgttacctgtgcacacacgttca
cagaaggctaggaagctgttagaccaagtgaggttcagaggggaaggtgctgccaatgct
ttactgcagtatctgcagcaaatagacagtaagccacaacgtgtgaaagacgaaaagcaa
ctctctgctgaatgccacctctaccagaagaagctttgcagctctgttgccgctcagtca
cactttctcagcacatatggcggaacaggaaagttttccctagacgatatctatactgat
ggccttctagaagtggtgcaaagtgacagagcggttacagctctggggctgcaggatgtg
gtgggtctgcttgggactcttaatgaggaagccgatacaatacttatttctggtgaagca
ggtactggtaagagtaccttgctgcagaggctccacctgctgtgggctcgaagtaccttg
ttgacagacgttctcatgctgttccctttcagttgccgtaaactgaatgctgagcagagg
atactctctttaaaagagctcctgttcctgcattgctgctggccggaccggggtcaagat
gaaattttccagttcattcttgaccaccctcacctagtccttttcacctttgatgggctt
gatgagtttaggcagagcttcaccgatgaagggcgccattgctgccccacacagcaagca
cccgtacacactctgcttttcaacctacttcagggtaccttaatgaaaggggtgaagaag
gtggtaaccagcagaccccaagcagtgggtccatctctgaagcggtatctccgcaaggaa
gtcctcgccaagggtttctctcctgtgggaattgaccactttgtaaggaaacaccacaat
gacgccactgtagctactcgggttgtagagtccctcaaggctaacacagccctacttggg
ctctgccatattcctgtgttctgctggattatatcaaagtgctacaaagagttgcttgga
tgtggggaaggcagccctcagacagtcactgatgtatacttcatggttctgaagcatttc
ctccagaagcggatgcctcagaagcacagcactttgggaaaaggatggctacaagaccat
ctagagacagtgagaagactaggacagttggcactggagggcttagagacatcctgttac
gtattcgcagagtcagacttgctcaaatgtggcatcacagagcaggacattggtctggga
ttccttatacactgtaaggacctctcagactatactgactgcaaacactttgagtttctg
catatcaccatgcagtgcttcttcgctgctctctatattgttctcaacaacaacgtcaac
tgctctgtcatcctaaatctctttcagtctcagtgcaagcagccaacagttcttaatcac
aactgtcttgtacattgcatgaagcctgtagttgatgactgcaatgtagcagagatccca
aacctgcagatcacctcagagtttgttgcaggacttctgtcccagcgctatcgcagtctc
cttgtacagtcctgtcctgctggcttgctcgagaaaaaatccaagcaagtcatgaagtgt
ttgtccaagggtatacagaggcatttcaaatcaatccctccaccagtgaagggtgaaaag
aagagcatgcatgccatgccgagttttgtttggctcattaagtgcatctatgagatgcag
gagagtgagattgctaagggtgcagtggccaaactagaagtagagcacctgaagttaata
tattgtaatattggtccagtggaatgcactgctctggcttatgtactcaggtacctgcaa
aatcctgttggaatacagctggacttcaactcggtgggggatgtgggattggaacaactc
ctgccatgtcttcatatctgtcactccctctacttgaggaacaataacatatcagatgaa
ggaatccgcaaacttgttgagaagggagtacactgcgaatgcttcgagaaagtagcgctg
ttcaacaacagactaacagatgagtgcacaaagcattttgccttgctgcttaagacaaag
aagaacttccttgcattaagacttggaaacaataacatcacatcacagggagccgagcag
ctggcagaagggctgaggcacaacacatcactgatgtatcttggactgtggggaaataag
attggagacaaaggcgctgaggctttagctgatgcactgaaggacagcaccacgttaata
tggttaagcctggcggataacagtgtaggcagcgcaggggcatgtgccttagcggagctt
gttaagagaagcacaacacttaaggagctctggctgaaccaaaactgcattagcagggat
ggcgtggagtgtctgattgaggctttgaaagtgagctctactgttaaggaagtgtggttg
agaggaaacaatctgagcgcagaggaggtgaaggaacttagtgagcaagaaagcagactc
atcttctaa
DBGET
integrated database retrieval system
