Pangasianodon hypophthalmus (striped catfish): 113541290
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Entry
113541290 CDS
T05759
Symbol
socs6
Name
(RefSeq) suppressor of cytokine signaling 6
KO
K04699
suppressor of cytokine signaling 6/7
Organism
phyp
Pangasianodon hypophthalmus (striped catfish)
Brite
KEGG Orthology (KO) [BR:
phyp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
phyp04121
]
113541290 (socs6)
Ubiquitin system [BR:
phyp04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul5 complex
Target recognizing subunit
113541290 (socs6)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SH2
SOCS_box
Motif
Other DBs
NCBI-GeneID:
113541290
NCBI-ProteinID:
XP_026793981
LinkDB
All DBs
Position
Unknown
AA seq
527 aa
AA seq
DB search
MKKTFSLKTFRKSFNIKGKEDGDFVMLQKPSLAPEFTKDDSLFGSCYAKELTCDLHGEDA
RAHKNRSKSESLMGTLKRRLSSKQKPKSKGGSASVGLGDDDDTFSSSSVPISFNEAKAQR
PLRSASLRSHHYSPSPWPIRTVDPEEACIKMEVKVKAMVHTPSSSPSLNGVRKEFHDIQM
EGLFDDRSDSMKNLEPPNSDLHLNMEAHMPVVIGLTPQDYIQYTMPLDEGMYPESSHSLC
LDGTSPIEVMEQVNDESLNVDQGHVDHDLLTSDILMDQSMNGIVLGTPGLVLQNSGSEAP
SLSPSLSPVSGGEIPRTYSGFGGADSHVAERVRHHLNFDPNFAPGVSRVYDSVQSSGPMV
VTSLTEELKKLAKQGWYWGPITRWEAEDKLIDLPDGSFLVRDSSDDRYLLSLSFRSQGKT
LHTRIEHSNGRFSFYEQPDVEGHTSIVDLIEHSIKDSENGAFCYSRSRQPGSATYPVRLT
NPVSRFMQVRSLQYLCRFVIRQYTRIDLIQKLPLPNKMKDYLQEKHY
NT seq
1584 nt
NT seq
+upstream
nt +downstream
nt
atgaagaagacgtttagccttaagacgttccgaaagtcattcaacatcaagggcaaagag
gatggagattttgtgatgctccaaaagccgtcgttggcccccgagttcacaaaagacgac
tctctttttggaagttgttacgccaaagagctaacttgtgacctccatggtgaggacgca
agggcccacaagaacagatccaagagtgaaagtcttatggggaccttaaaaaggagactt
tcttccaagcagaaacctaaaagtaaaggagggtcagcctcagtgggcttgggagatgat
gacgatacgttctcatcctcttcagtccccataagctttaatgaagccaaagcccagcgc
cctttaagatcagcttccctgcggagtcatcactacagcccttccccttggcccataaga
accgttgaccctgaggaagcctgtattaagatggaggtgaaggtaaaagccatggttcac
acacctagctccagtccatcccttaatggtgttcgaaaagagttccatgacatccaaatg
gagggactttttgacgatcgaagcgactctatgaagaatttagagcctccaaacagtgac
ttgcatttaaacatggaagcacacatgcctgtagttattggactgacacctcaggactac
atccagtacacaatgcctttagatgagggaatgtaccccgaatcgtcccactctttgtgc
ttggatggcacctcacccatagaggtgatggaacaagtcaatgacgaatcgttgaatgtg
gatcaaggccatgttgaccatgatcttttaacttcggatattctcatggatcaatccatg
aatgggattgtacttggtactccgggactagtccttcaaaattcaggatccgaggctcct
tcactttcgccttcgctttcccctgtttctggtggtgaaattccaagaacctattccgga
tttggtggtgctgattcacacgttgcagaaagagtgaggcaccatctcaattttgaccca
aattttgctcctggtgtcagcagggtatatgattcagtacaaagcagtggaccaatggtt
gtcacgagccttacagaagagctgaagaaactggctaagcagggttggtactggggacct
ataacgcgatgggaagctgaggacaaactcatcgaccttccggatggttcttttttggtg
cgtgatagctcagacgaccgctatcttctcagtttgagctttcgatcgcaaggcaagact
cttcacactaggatcgaacattcgaacggaaggttcagcttttacgaacagcccgatgta
gaaggtcacacgtccatcgtcgacctcatcgagcactccattaaggactctgaaaacggt
gcgttctgttactccagatcgcgccagccaggatctgcgacgtacccggttcgattgacc
aatcccgtatctcgtttcatgcaagtgcgttcgctgcagtacttgtgccgattcgttatt
cgacaatacacacggattgacctgattcagaaactacctttaccaaacaaaatgaaagat
tacttgcaggaaaagcactactga
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