Pangasianodon hypophthalmus (striped catfish): 113541559
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Entry
113541559 CDS
T05759
Symbol
rb1
Name
(RefSeq) retinoblastoma-associated protein
KO
K06618
retinoblastoma-associated protein
Organism
phyp
Pangasianodon hypophthalmus (striped catfish)
Pathway
phyp04110
Cell cycle
phyp04218
Cellular senescence
Brite
KEGG Orthology (KO) [BR:
phyp00001
]
09140 Cellular Processes
09143 Cell growth and death
04110 Cell cycle
113541559 (rb1)
04218 Cellular senescence
113541559 (rb1)
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
phyp01009
]
113541559 (rb1)
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
phyp03000
]
113541559 (rb1)
Protein phosphatases and associated proteins [BR:
phyp01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
113541559 (rb1)
Transcription factors [BR:
phyp03000
]
Eukaryotic type
Other transcription factors
Pocket domain Rb
113541559 (rb1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Rb_C
RB_A
RB_B
DUF3452
TFIIB
Motif
Other DBs
NCBI-GeneID:
113541559
NCBI-ProteinID:
XP_026794408
LinkDB
All DBs
Position
Unknown
AA seq
907 aa
AA seq
DB search
MPPKKRSSGGGSGSGSGSGTPPSREAKWSNKKENSVLSPEKHKEKDPEFVALCKDLSVSN
SVCTQAWALWESMTKTVEKVTESNKQLWGACVYISAVDSDDVRFTFTEFQKAVGLSVKQF
LTLVRKLDENVDTISPKVNSAVTRLEKKYEVSLAIYQRFVKTCARIYSVPDEVKRQELLR
CSWILFLLAKGSVLQMEDDLVIAFQLLLCVLEFYIKRCPSSLLQPLYKAAISETTQSPPT
RTSRRNKAKPRPSEMDVQLLEKLCKESDCSVDEVKNVYQSSFCAFLDSMRLSGSQELPAV
ETLSKSYEELYHKSKDFDARLFLVDDETLSPVKAEVTKVEMTPRKNPSGEENVSIPPQTP
IRAAMYSIQQLRGELTSISDQPSGVLMVYFKNCTVDPSEDIVKRVDQLGQTFSQKFAQAV
GQRCEGLGKKRFTLGVQLYYKVMESMLKSEEKRLSVQNFSKLLNNATFHTSLLACALEVV
LATYVGYSLKNGGSESPETDLCFPWILDVFELHAFDFYKVIESFIKAEPTLKHDMIEHLG
RCEQQIMESIAWKSDSLLFELLRQSREDGSGEQAEPPATLNQPLQHNHTAADLYLSPLRP
SRRAAAAAAEADIPVMPPSQPSAPGTKQHRSNSLSLFYKKLYRMAYLRLKMLFSDLLTSH
PELEAIIWTLLQHTLQNEYELMKDRHLDQLMMSAMYAICKVKNVDLRFKTIVTAYKELPN
TNQETFKRVLIRDGQYDSIIVFYNLVFMQRLKTNILQYASPRPPPLSPIPHIPRSPYMYP
SSPLRVPGGNVYISPLKSSRLTPAPMTPRSRILVSIGESFGTSDKFQKINQMVSSTDWPQ
KRSLAGDSNPKPLKRLRFDVDGQDEADGSKSSGESTLDKKLAEMRSVRDRMQEQKMKEEA
EKEDPEP
NT seq
2724 nt
NT seq
+upstream
nt +downstream
nt
atgcctcccaaaaagcgcagcagcggcggcggcagcggcagcgggagcggcagcgggacc
cctccgagcagagaggcgaagtggagcaacaagaaggagaactcggtgctctctccagaa
aagcacaaagagaaggatccggagtttgtagccctttgtaaggacctctcagtctccaac
tcggtgtgtactcaggcgtgggcactgtgggaatcgatgaccaagacagtagagaaagtc
accgaatcaaacaagcagctctggggagcgtgcgtgtacatttcagccgtggactcggac
gacgtcagattcacctttacagaatttcagaaggctgttggtctgagtgtgaagcagttt
ctcaccctggtgcgaaagctggatgaaaacgtggacacaataagccctaaagtaaactcg
gccgtgacgaggcttgagaagaaatacgaggtgtcgctggctatctatcagagatttgtg
aaaacatgtgccagaatctatagtgtgcctgatgaagttaagagacaagagcttttgcgc
tgtagctggatcttattcctcttggctaaaggaagtgttctgcagatggaggatgacctg
gtgatagccttccagttacttttgtgtgttctggagttctacatcaagcgttgcccgtcc
tctctcctccagcctctctacaaggcagcaatcagcgagacgacacagagccctccaact
cggacctcaaggcggaacaaggccaagccccgtccttccgagatggatgtgcagttgctg
gagaagttgtgtaaggagagcgactgcagcgtagacgaggtgaaaaacgtctaccaaagc
agtttctgtgctttcctggactccatgcgcttgtcaggctcacaggaacttccagcagtg
gaaactctatccaaaagttatgaagagctctaccataaaagcaaggactttgacgcacga
ctgttcttagttgatgacgagaccctcagcccagtcaaagcagaagttacaaaagtagaa
atgactcctaggaagaacccttctggagaggagaatgtctccattccaccacagacccct
atcagagctgcaatgtattcgatccagcagctgaggggtgagcttacctcaatcagtgac
caaccttcaggcgttctcatggtttacttcaagaactgcactgtggacccctcagaagac
atcgtgaagcgggttgaccagctgggtcagaccttcagccagaaatttgctcaagctgtt
ggtcagcgctgtgaaggactgggcaaaaagagatttactctaggtgtccagctttactac
aaagtcatggagtcgatgcttaagtcggaagagaagagactctcagtgcaaaatttcagt
aaactcctgaacaacgctactttccacacttcactccttgcctgtgcactggaagttgtc
ctggcaacttatgttggatattccctgaaaaatggcggcagtgaatctcccgaaacggac
ctatgcttcccctggatcttggatgtcttcgagcttcatgcctttgacttctacaaagtg
atagaaagtttcatcaaggcggagcccactctgaaacacgacatgatcgaacacttaggc
cgctgtgagcaacagatcatggagagcattgcatggaaatcggattctctcctgtttgag
cttctgaggcagtctcgtgaggatggttccggagagcaagcagagcctcctgcgacgctg
aaccagcctctacagcacaaccacacagcagctgatctatatttgtctcctctgcgtcca
agtcgtcgagctgcagcagcagcagcagaggcagacattccagtcatgcctccgtcacag
ccctctgccccaggcaccaaacagcatcgctccaactccctcagcctcttctacaagaaa
ctgtacagaatggcctacctgcgactgaaaatgcttttctctgaccttctgacctctcac
cccgagctggaggccatcatatggactctgctccagcacacactccagaacgagtatgag
ctaatgaaggacagacacctagaccagctgatgatgtctgccatgtacgccatatgcaag
gtgaaaaatgtggatttgcgcttcaagacgattgtcactgcgtacaaagagcttcccaac
acaaaccaagagactttcaagcgtgtgttgatcagagacggccaatatgattccatcatc
gtcttctacaacctggtgtttatgcagaggttgaagacgaacatcctgcagtacgcttct
cctcggcctcctcccctttctcccattccacatattccccggagcccgtacatgtatccc
agctcccccctcagagtgcctggtgggaacgtctacatctcccctttaaagagcagtcgt
ttgaccccagcacccatgacaccccggtccaggatccttgtatccattggagagtcgttc
gggacctcggacaagttccagaagatcaatcagatggtcagtagcacagactggccccag
aagaggagtctagccggagactccaaccccaaacccctgaagcgcttacgtttcgatgtg
gatggacaggatgaggctgatgggagcaaatcaagcggcgagtctacactagacaagaag
ctggctgagatgcgttcagttcgcgatcgcatgcaggaacagaaaatgaaggaggaggct
gagaaggaagacccagagccctga
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