Pangasianodon hypophthalmus (striped catfish): 113542895
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Entry
113542895 CDS
T05759
Symbol
sqstm1
Name
(RefSeq) sequestosome-1
KO
K14381
sequestosome 1
Organism
phyp
Pangasianodon hypophthalmus (striped catfish)
Pathway
phyp04137
Mitophagy - animal
phyp04140
Autophagy - animal
phyp04217
Necroptosis
phyp04218
Cellular senescence
Brite
KEGG Orthology (KO) [BR:
phyp00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
113542895 (sqstm1)
04137 Mitophagy - animal
113542895 (sqstm1)
09143 Cell growth and death
04217 Necroptosis
113542895 (sqstm1)
04218 Cellular senescence
113542895 (sqstm1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
phyp04131
]
113542895 (sqstm1)
03029 Mitochondrial biogenesis [BR:
phyp03029
]
113542895 (sqstm1)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
phyp04147
]
113542895 (sqstm1)
Membrane trafficking [BR:
phyp04131
]
Autophagy
Mitophagy
Cargo receptors
113542895 (sqstm1)
Pexophagy
113542895 (sqstm1)
Aggrephagy
113542895 (sqstm1)
Xenophagy
113542895 (sqstm1)
ER-phagy
ER-phagy recepters
113542895 (sqstm1)
Other autophagy associated proteins
Midbophagy
113542895 (sqstm1)
Mitochondrial biogenesis [BR:
phyp03029
]
Mitochondrial quality control factors
Mitophagy factors
Parkin-dependent mechanism factors
113542895 (sqstm1)
Exosome [BR:
phyp04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
113542895 (sqstm1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UBA_5
ZZ
PB1
Med3
Motif
Other DBs
NCBI-GeneID:
113542895
NCBI-ProteinID:
XP_026796533
LinkDB
All DBs
Position
Unknown
AA seq
462 aa
AA seq
DB search
MSVTVKAYLLGKEDCHKEIRRFPIDQDVSTSFEYLNRKVVDVFANLRNISFQMYYKDEDE
DMIAFSSDNELMMGLAMVKDDTFRIFIKEKKEHKRDFPHHMDQGFPFPPPPGPHHMGPQG
HPPMGPPHMGPPFMGPPHHQLMVHPGVTCDGCEGQVAGTRFKCTVCPNYDLCSTCQAKGL
HKEHALLPIFHPMTNMYEWFPRGKFWRKMRHCMWAGAQAQAQAQAQAQNQAQPGPSGCQP
SSQQANSQDGQAQNGASSAKANMEYLRNIGEGVAALLSPLGIDVDIDVEHEGNKAKVTTP
PPASSGPPSGRSDGSSGGHSKGADGGPSSAGSTNGGKKMVLLDQKDQSNDEEWTHLSSKE
VDPSTGELQSLRMEVDGANDDPAPLSHSSTFNPGPSGLREAAHYPHLPQDADPRLVESLS
QMLSMGFTDEGGWLTRLLHTKNYDIGAALDTIQYAKPPDQRK
NT seq
1389 nt
NT seq
+upstream
nt +downstream
nt
atgtcggtgacagtaaaggcttacctcctcgggaaagaggactgtcataaggagatccgc
cgcttccccatcgatcaggacgtctcgacaagtttcgagtacttgaatcgcaaggtggtg
gatgttttcgcaaacctgcgcaatatctccttccaaatgtactacaaagatgaggatgaa
gacatgattgccttctcttctgataatgagctcatgatgggactggctatggtgaaggac
gataccttccgcattttcatcaaggaaaaaaaggagcacaagcgtgacttcccacatcat
atggaccaagggttccccttcccccctcctccaggacctcatcacatgggtcctcaagga
caccctccaatgggtccaccccatatgggtccaccctttatgggtccacctcatcaccaa
ctcatggttcaccctggtgtgacttgtgatggttgtgagggccaagtggctgggacccgc
ttcaagtgcaccgtgtgccccaattatgacctgtgctccacctgccaggccaagggcctc
cacaaggaacatgctctcctgcccatttttcaccccatgaccaatatgtatgagtggttt
cctcgtggcaaattttggcgcaagatgaggcactgcatgtgggctggggctcaagctcag
gctcaggctcaggctcaggctcaaaaccaggcccagcccgggccatctggttgccagccc
agctcccagcaggctaactcgcaggatggccaagctcaaaatggagcctcatctgccaag
gccaatatggagtacctgaggaacattggagagggagtggctgccttgctaagccccctt
ggcatcgatgtggacattgatgttgagcatgagggcaacaaggccaaagtgacaacacct
cctcctgcctcaagtggacctcctagtggccggagtgatggtagctctggaggccattcc
aagggtgcagatggaggtccaagcagtgcagggagtaccaatggggggaaaaagatggtt
ttgctggatcagaaagaccaaagtaacgatgaggaatggacccatctgagctcaaaggaa
gtggacccatccacaggcgagctccagtcactcagaatggaggtggatggagcaaatgat
gaccctgctccactcagccacagctccacctttaacccaggccccagtggtctccgtgaa
gctgcccactatccacatctgcctcaagacgctgaccctcggctggtggagtctctgtcc
cagatgctctccatgggcttcacagatgaaggtggttggctgaccagactgctccacacc
aagaactatgacattggagccgctctggacaccatccagtacgccaaacccccagaccaa
cggaagtga
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