KEGG   Pangasianodon hypophthalmus (striped catfish): 113542941
Entry
113542941         CDS       T05759                                 
Symbol
ran
Name
(RefSeq) GTP-binding nuclear protein Ran
  KO
K07936  GTP-binding nuclear protein Ran
Organism
phyp  Pangasianodon hypophthalmus (striped catfish)
Pathway
phyp03008  Ribosome biogenesis in eukaryotes
phyp03013  Nucleocytoplasmic transport
phyp03250  Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:phyp00001]
 09120 Genetic Information Processing
  09122 Translation
   03013 Nucleocytoplasmic transport
    113542941 (ran)
   03008 Ribosome biogenesis in eukaryotes
    113542941 (ran)
  09125 Information processing in viruses
   03250 Viral life cycle - HIV-1
    113542941 (ran)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:phyp03019]
    113542941 (ran)
   03009 Ribosome biogenesis [BR:phyp03009]
    113542941 (ran)
   03016 Transfer RNA biogenesis [BR:phyp03016]
    113542941 (ran)
   03036 Chromosome and associated proteins [BR:phyp03036]
    113542941 (ran)
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:phyp04147]
    113542941 (ran)
   04031 GTP-binding proteins [BR:phyp04031]
    113542941 (ran)
Messenger RNA biogenesis [BR:phyp03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Ran-mediated transport factors
     113542941 (ran)
Ribosome biogenesis [BR:phyp03009]
 Eukaryotic type
  Pre-40S particles
   Export and cytoplasmic maturation factors
    113542941 (ran)
  Pre-60S particles
    113542941 (ran)
Transfer RNA biogenesis [BR:phyp03016]
 Eukaryotic type
  tRNA transport factors
   tRNA export factors
    113542941 (ran)
Chromosome and associated proteins [BR:phyp03036]
 Eukaryotic type
  Centrosome formation proteins
   Centrosome duplication proteins
    Regulators of centriole replication
     113542941 (ran)
   Spindle formation proteins
    113542941 (ran)
Exosome [BR:phyp04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   113542941 (ran)
GTP-binding proteins [BR:phyp04031]
 Small (monomeric) G-proteins
  Ran Family
   Ran
    113542941 (ran)
SSDB
Motif
Pfam: Ras Roc Arf GTP_EFTU MMR_HSR1 G-alpha RNA_helicase AAA_24 Gtr1_RagA Pox_A32 ArgoMid AAA_7 Septin AAA_16 AAA_22 TsaE DUF5906 SRPRB AAA_33
Other DBs
NCBI-GeneID: 113542941
NCBI-ProteinID: XP_026796599
LinkDB
Position
Unknown
AA seq 215 aa
MAENDPQVQFKLVLVGDGGTGKTTFVKRHLTGEFEKKYVATLGVEVHPLVFHTNRGAIKY
NVWDTAGQEKFGGLRDGYYIQAQCAIIMFDVTSRVTYKNVPNWHRDLVRVCENIPIVLCG
NKVDIKDRKVKAKSIVFHRKKNLQYYDISAKSNYNFEKPFLWLARKLIGDPNLEFVEMPA
LAPPEIAMDPSLAAQYEHDLKVASETALPDEDDDL
NT seq 648 nt   +upstreamnt  +downstreamnt
atggcagagaacgacccacaggttcagtttaagctggttctcgtaggagatggaggcacg
ggaaagaccacctttgtgaagaggcacttgacaggagagtttgaaaagaaatatgtcgca
actctgggtgttgaagtgcaccccttggtcttccacactaacagaggagcaatcaaatac
aacgtgtgggacacagccggacaggagaagttcggaggcctgcgagacggatactacatt
caagctcagtgtgcgatcatcatgttcgacgtgacctctcgagtgacttacaagaatgtt
cccaactggcatcgtgacctggtgcgtgtgtgtgagaacattcccatagtgttgtgcggc
aacaaagtggacatcaaggacaggaaggtgaaagctaagagcattgtgttccaccgcaag
aagaacctacagtactatgacatctccgccaagagtaattataactttgagaagccgttc
ctgtggcttgcacgaaagctgatcggagatcccaacttggagtttgtggagatgcctgcc
ctcgccccacccgaaatcgccatggacccatcgcttgctgcacagtacgagcatgacctg
aaagtggcatcagaaacagctctcccagatgaggacgacgacctctaa

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