Pangasianodon hypophthalmus (striped catfish): 113542970
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Entry
113542970 CDS
T05759
Name
(RefSeq) short transient receptor potential channel 5-like
KO
K04968
transient receptor potential cation channel subfamily C member 5
Organism
phyp
Pangasianodon hypophthalmus (striped catfish)
Brite
KEGG Orthology (KO) [BR:
phyp00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
phyp01009
]
113542970
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
phyp04040
]
113542970
Protein phosphatases and associated proteins [BR:
phyp01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
113542970
Ion channels [BR:
phyp04040
]
Voltage-gated cation channels
Transient receptor potential channel (TRP)
113542970
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ion_trans
TRP_2
Ank_2
Ank
Ank_3
Ank_4
Ank_5
PKD_channel
YVC1_C
LHD_TRPY1
Motif
Other DBs
NCBI-GeneID:
113542970
NCBI-ProteinID:
XP_026796634
LinkDB
All DBs
Position
Unknown
AA seq
1020 aa
AA seq
DB search
MNPMAQLYYKKASYSPYRDRIPLQIVRAEAELSAEERAYLSAVEKGDYAGVKMALEQAEI
YYNINVNCLDPLGRSALLIAIENENLEVMELLLSHGVHVGDALLYAIRKEVVGAVELLLS
YRKPSGEKQVPALMMDTQFSEFTPDITPIMLAAHTNNYEIIKLLVQRKVTVPRPHQIRCD
CVECVSSSEVDSLRHSRSRLNIYKTLASPSLIALSSEDPILTAFRLGWELKELSKVENEF
RQEYEELSQQCKLFAKDLLDQARSSRELETILNHRDDHSEELDPRECRDLAKLKLAIKYH
QKEFVAQPNCQQLLATLWYDGFPGWRRRHWVVKLITCFTIGLLFPVFSIIYLLAPKSTLG
LFIKKPFIKFICHTASYLTFLFLLLLASQHIVQTDLHVQGPPPTIVEWMILPWVLGFIWA
EIKEMWDGGFTEYVHDWWNLMDFAMNSLYLATISLKMVAYFKYNSSRPREEWEMWHPTLI
AEALFAIANIFSSLRLISLFTANSHLGPLQISLGRMLLDILKFLFIYCLVLLAFANGLNQ
LYFYYETEAADEPNHCKGIRCEKQNNAFSTLFETLQSLFWSVFGLLSLYVTNVKARHEFT
EFVGATMFGTYNVISLVVLLNMLIAMMNNSYQLIADHADIEWKFARTKLWMSYFDEGGTL
PPPFNIIPSPKSMWYLCVWLHSRFCGRGQPTPEEQHKHDNLKEFTERHADSLIQNQQYQE
VIKNLVKRYVAAMIRRTKTDEGLTEENFKELKQDISSFRYEVLDLLGNRKPPRRTYSSSS
EATQPEAEQDDDEEDTEKRNRGARPGGQADSSSVSFAQADKRKREGQFTVSALFRSMAGL
EDVDEGPKSNGLKKNRWSPSSFVRTSGRLRHFSRSKKDSLRRLGSLFRRVNGHVAESRLK
SPQQQQTYSISDGVLQPPTSWQDPRAQPESWLTRSSMHLHTLGGESGARDKNQIQSVSQQ
ANDTDNLLLRPPGLHCASSLTASSSLLLSSSEDLCQGLPGPCESLDSSYWEQEESITTQL
NT seq
3063 nt
NT seq
+upstream
nt +downstream
nt
atgaaccccatggcgcagctgtactacaagaaggcgagctattcgccgtaccgtgaccgg
ataccactgcagattgtgcgggccgaggctgagctatcagcagaggagcgtgcctaccta
agcgcagtggagaagggggactatgcaggtgtaaagatggcccttgaacaggccgagatc
tattacaatattaatgttaactgcctggacccgctaggacgcagcgcccttctaatcgcc
attgagaacgagaatctggaggtaatggagctgctgctgagtcatggtgtgcatgtggga
gatgctctgctctacgccatccgcaaggaggtggtgggtgcagtggagctgctgctatcc
tacaggaaacccagcggtgaaaaacaggtacctgcacttatgatggacactcagttctca
gaattcacacctgatatcacgcccatcatgctggctgcacacaccaacaactatgaaatc
atcaaactgcttgtccagcgcaaggtcactgtgccacggccacaccagatccgctgtgac
tgtgtcgagtgtgtgtccagctcagaggtggacagtctgcggcactcacgctcccgactt
aacatctacaagacactggcgagtccttcactcattgctttgtccagtgaggaccctatc
ctcacagctttccgtctaggctgggagctgaaggagctcagcaaggtggagaatgaattc
cggcaggagtacgaggagctctcgcagcaatgtaagctctttgctaaggacttgctggac
caagcaagaagttcccgtgagctagagacgatcctcaaccaccgtgatgaccacagcgaa
gagctagacccccgagaatgcagagacctggccaagctcaagctggccatcaaataccac
cagaaagagtttgtggctcagcccaattgccagcagctactggccacgctgtggtatgat
ggcttccctggatggcgacgacgtcactgggtggtgaagctgatcacatgtttcaccatt
ggcctactctttcctgtcttctccatcatctacctgctggcaccaaagagcacactgggt
ctcttcatcaagaaacctttcataaaattcatctgtcatactgcctcatacttgaccttc
ctcttcctcttgctcttggcctcacagcacattgtacaaactgacctgcatgttcagggt
ccaccacccactattgtggaatggatgatcctaccttgggttctgggctttatttgggct
gagattaaagagatgtgggatggaggcttcactgaatatgttcacgattggtggaacctg
atggactttgctatgaactctctctacctagccaccatatctctcaaaatggtggcctac
tttaagtacaacagctcccgtcctcgtgaagagtgggagatgtggcacccgacactgatt
gccgaggcgttgtttgccattgccaacatcttcagctcgcttcggctcatctcacttttc
acagccaattctcacctgggcccactgcagatctcgttgggccgaatgttgcttgatatc
ctcaagttccttttcatctactgcctggtgctcttggccttcgctaatggactcaaccag
ctctatttctactatgaaactgaagcagctgatgagccaaaccactgcaaaggcatccgc
tgtgagaaacagaacaatgccttctccacgttatttgagacacttcagtctctcttctgg
tctgtgtttggtctgctcagcctctacgtaaccaatgtgaaagctcggcacgaattcact
gaatttgttggggccactatgttcggcacctacaatgtcatctcactggtggtgctgctc
aacatgctcatagctatgatgaacaattcctaccagctcattgctgatcatgctgacatc
gagtggaagtttgcccgtaccaagctgtggatgagctactttgatgaaggagggacgctt
ccgcctccgttcaacatcatccccagtcccaagtcgatgtggtacttgtgcgtatggctg
cacagccgtttctgtggtcgaggacagcctacccctgaggaacagcacaaacatgacaac
ctcaaagagttcacggaacgacacgctgacagcctcattcagaaccagcagtatcaggaa
gtgatcaaaaatctggtgaaacgatatgtggcagccatgatccgcagaaccaaaactgat
gaagggctgactgaggaaaacttcaaggagctcaaacaggacatctcaagtttccgctat
gaggtcctggacctgctgggcaaccgcaagccgccccgccgcacctactcctcaagcagt
gaggccacacaacctgaggctgagcaagatgatgacgaggaagatacggagaagaggaac
agaggagcaaggcctggaggacaagcagattcaagttctgtctcatttgcccaagcagac
aagagaaagcgtgagggccaatttaccgtttcagctcttttccgctctatggcaggtctg
gaggatgtggatgaaggaccaaaaagcaatggcttgaagaaaaacaggtggtccccttca
tcatttgtgaggacaagtggccgcttgcggcacttctcacgctcaaagaaagactcactg
cgccgtctgggatcactgtttcgtcgtgtgaatggacacgttgccgaatcacgcttgaag
agtccgcaacagcaacaaacctacagtatttctgatggagttttgcaaccaccaacatcc
tggcaggaccccagagcacagccagagagctggctgacaagaagcagcatgcacctgcac
acgctcggaggagagtctggtgcaagagacaagaatcaaatacagtcagtgtcccagcag
gcaaatgacacagacaacctcctgctaaggccccctggcctacactgtgcttccagcctg
actgcctccagttcccttttgctctcctccagtgaggatctgtgtcagggcttgccaggg
ccctgtgagagccttgactcctcctattgggaacaggaggagtcaatcaccacacagctc
taa
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