Pangasianodon hypophthalmus (striped catfish): 113543504
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Entry
113543504 CDS
T05759
Name
(RefSeq) T-lymphoma invasion and metastasis-inducing protein 1-like isoform X1
KO
K05731
T-lymphoma invasion and metastasis-inducing protein 1
Organism
phyp
Pangasianodon hypophthalmus (striped catfish)
Pathway
phyp04530
Tight junction
phyp04810
Regulation of actin cytoskeleton
Brite
KEGG Orthology (KO) [BR:
phyp00001
]
09140 Cellular Processes
09144 Cellular community - eukaryotes
04530 Tight junction
113543504
09142 Cell motility
04810 Regulation of actin cytoskeleton
113543504
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
phyp04990
]
113543504
Domain-containing proteins not elsewhere classified [BR:
phyp04990
]
Pleckstrin homology (PH) domain-containing proteins
Dbl-Like RhoGEF family proteins
113543504
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PH_Tiam1
RhoGEF
Tiam_CC_Ex
PH
RBD
PH_9
PDZ
SOS1_NGEF_PH
PDZ_6
PDZ_2
Motif
Other DBs
NCBI-GeneID:
113543504
NCBI-ProteinID:
XP_026797546
LinkDB
All DBs
Position
Unknown
AA seq
1613 aa
AA seq
DB search
MGNIESQNGDHSLYFETQNHLSRKHMSHSLRISNKHSRRSRNILSGKAEHHGSEASTRSS
STPSIPQSLSENGLEPFNETDALSGHVWVDPVGVNLRPISFHDQAGEQSTTPGSEDGGET
VVGDGQDDEGLNETEKTYLQRVNDPSGEGGSFKNKKRSKSADMWREDSLEFSLSDLSQEQ
LTSTEEIVHTTEPENGTLNRGHEGHSGERTNSLDELCTQKTHRGSRNRYKYRRDSKRTAA
GKITNSMLSPGEEEGSGYGAYTLPCRRSHCLSEGPPSQQGALCSSMQGRRAQTSHDITAG
EGSEYGDSGIDGVTVDAKPQSRRCKAMSASFSVYSAASVRSSSGSSSGGGGDRERRLGEG
QGVYENFRQELELSSRQTYESLEEAGSAVSDERSSGTASSAFLSEALFLETTQGTVRKAG
ALAVKNFLVHKKNKKVEPATKRKWKRYWVSLKGCTLFLYETDGRSGIDHNSIPKHAVWAE
NSIVQAVPEHPKKDFVFCLSNSLGDAFLFQTSGQTELENWITAIHSACATAVARQHHRED
TVRFLRAEIKKLEQKIDMDEKMKKMGDMQLSAVTDSKKRKTILEQIFLWEQNLEQFHVDL
FRFRCYLSSLQGGELPNPKRLLAFASRPTKLAMGRLGIFSVSSFHALVAARTESGVRRRT
HALSRSSSKRKSRFSSLWGLDTTSKKKSKSRPSISQVFVDGEEPVKKSLQDMFGDPTKES
LDQTGSMRSLPQHAADSDVWVTEYLTPSWVILPNDQPVLAIIQPGETTLEALESLCKAHS
LDRPKHYLRLKFLIDNQVQFYVPKPEEELWDLLYKEIEICTKITKVIQFDRNESCAIGYG
FSVVVVDDDGTQQLHITNVKAGGMAFTKGLRAGDEILQLNDKEASVLELSDLSAAFAQPS
LTLTISAVPSSEPCQRCPLLPRRSDTPHDLYTDIFSQSQEDILDEASGLALESPDTEDME
ESVILPVEDAVDGSVAELETDSEHKSTEQMTAFCRSLHDMNPAEPVASSSSSSSSSCVPS
PISAVPVPSTQRQLSDADKLRKVINELVDTERTYVKDLHFLIERYLTPLQKEHFLSQDEL
DVLFGNLPEMVEFQVEFLKTLEDGTRLVPDLDKLERVDQFKKVLFSLGGSFLYYADRFKI
YSAFCASHTKVPKVLTKAKTDPEFKAFLAKRNPRQQHSSTLESYLIKPIQRVLKYPLLLR
ELYCLTDPDSEEHYHLNVAIKAMNKVASHINEMQKIHEEYGAVFDQLISEQSTDKKEVAD
LSMGDLLLHATVVWINPPASLMKGKKDPELAAFVFKTAIVFVYKDCSKQKKKIGTSHRGF
VSDERDPFRFRHMIPSDALQVRNTANSDGTAVCEIVHIKSESEGRPERSFHLCCSSSESK
RDFLKTVHSVLRDKQRRQLLKTESLPLNQQYIPFGGKRFFALKGVRPMNRAVSTPPGNLG
RKRLVRNRFTINTDIVFDNCSSQDSTDFPQRHHPLPSQNNHQADGDTNHWVEEQFDLQLY
DRQTDVKETDILSDDDEYCESVKGSSAEPSLEESFEALIAEVEEEQKEEDKKEEDSASNR
GSKTKLPENSLGQLRLTPLRKQCAVEGDVAQKEVEVIWVRRDDFNSGCGTDIF
NT seq
4842 nt
NT seq
+upstream
nt +downstream
nt
atgggaaatatagagagccagaatggagaccacagcttatactttgagactcaaaaccat
ctatcacgcaagcacatgtcacactctctccggatctccaacaagcattcacgccgctct
cgcaacattttgtctggtaaagcggagcaccatggttcagaagccagcaccagatcaagc
agcacacccagcatccctcagtcgctgagcgaaaatggcctggagccttttaatgagaca
gatgcactgagtggacacgtctgggtggatccggttggcgtgaacctgcggcccatatct
tttcatgaccaggctggtgaacagagtaccaccccaggctcagaggacggaggggaaaca
gtggtgggcgatggacaggacgatgaaggcctcaatgagacagagaagacatacctgcag
agggtgaatgatccatctggtgaaggtggaagcttcaagaacaagaagcgctccaaatca
gccgacatgtggcgtgaagactcgcttgagttctcgctgtctgacctcagccaggaacag
ttaacgagcacagaggagatcgtccacaccactgagcctgaaaatggaacgttaaacaga
ggacatgagggtcactctggtgagaggaccaattctttagatgagctgtgcacccagaag
acacaccgaggctctaggaatcgctacaagtacaggcgggatagcaaaaggacagcagca
gggaagataaccaatagtatgctgtctcctggggaagaagaaggcagtggttatggagca
tacacactgccctgcagacgctctcactgcctttctgaaggtcctcccagccaacagggg
gcactgtgctcgagcatgcaaggtcgacgtgcacagacttcacatgacatcacagcagga
gagggaagtgaatatggagacagtggcattgatggtgtgactgttgatgccaagccccag
tcgcgtcgctgcaaggccatgtcggcttctttctccgtgtactctgcagccagcgtcagg
agcagcagtggtagcagcagtggaggaggaggggatcgggagaggcggctgggtgaaggc
caaggcgtgtatgagaactttcgacaggagctcgagttaagctcacggcagacatacgaa
agcctggaagaggcagggtcggcagtcagtgatgagagaagcagtggcacggcgagttct
gccttcctgtcggaggcactgtttctcgagacaacacagggtacagtacgcaaggcaggt
gcactagctgtgaagaacttcttggtgcataagaagaataagaaggtggagccggcaact
aagcggaagtggaagcgctactgggtatcactgaaaggatgcacactcttcctttatgag
actgatggacgctcaggaattgatcacaacagcattcccaaacatgcagtgtgggctgag
aacagcatcgtccaggctgttcctgaacaccccaagaaggactttgttttctgcctgagt
aactcattaggtgatgcctttctcttccagacgtcagggcagacagagctggagaactgg
atcacggccatccactcagcatgtgccacggcagtggcccggcagcaccaccgcgaggac
actgtgcgcttcctgcgcgctgagataaagaagctggagcagaagattgatatggacgag
aagatgaagaagatgggagacatgcagctctcagctgtcactgacagtaaaaagaggaag
actattctggaacagatcttcctgtgggagcagaaccttgagcagtttcatgtggatctg
tttcgttttcgctgttacttatccagcctgcagggtggcgagcttcccaaccccaagcgc
ctactggcttttgcctcgcggcccacgaagctggccatgggccgcctgggcatcttctcc
gtctcttccttccatgccctggttgcagcacggacagagagcggcgttcggagacggact
catgccctgtctcgctcttccagtaaacgcaagagccgtttttcctcactgtggggtctg
gacactacctcaaagaagaaaagcaaaagcagacccagcattagccaggtgtttgtggat
ggagaggaaccagtgaaaaaaagtctgcaggacatgtttggtgacccgaccaaggagagc
ttggatcagacagggtccatgaggagtcttcctcagcatgctgcagacagtgacgtttgg
gttactgaatacctcacaccatcttgggtaatattgcccaacgatcagcctgttctggca
attatacagccaggtgaaacgaccctggaagccctggaatcactgtgcaaggcccacagt
ctggatcggcccaagcactatctccggctgaagtttctaatcgacaatcaagtgcaattt
tatgtccctaagcctgaggaggaactctgggacctgctctacaaagagattgaaatttgt
accaaaattaccaaagttatccagtttgacagaaatgaatcctgtgctattggatatggg
ttttctgtagttgtggtggatgacgatggcacgcagcagctacatattacgaacgtaaag
gcaggaggcatggctttcactaaaggtctgagagctggtgatgagatcctgcagttgaac
gataaagaggcgagtgtgttagagctgtcggacctgagtgctgcgtttgctcagccttct
ctcacactcaccatcagtgctgtgccctcatccgagccgtgccagcgatgtccactgctt
ccccgccgctcagacacaccacacgatctctacacagacatcttctcccagagccaagag
gacatcttggatgaggcctctggacttgcgcttgagagcccggacactgaagacatggaa
gaaagtgtcattctacctgtggaggatgcagtggatggttcagtggctgagctggaaact
gactctgaacacaagagtacagagcaaatgactgcattctgccgcagccttcatgacatg
aatcctgccgagcctgttgcatcctcttcctcgtcctcctcctcctcgtgtgtccccagc
cctatctctgcagtgcctgtaccttccacccagcgccagctctccgatgctgacaagctg
cgcaaggttataaatgagctggtggacacagagcgcacctatgtgaaggacctacatttt
ctgatagagagatacctgactcctctgcagaaggaacatttcctgtcacaggatgagctg
gatgtgcttttcgggaacttgccagagatggttgagtttcaagtggagtttcttaagact
ctggaagatggaacaagattggttccagatttagacaagcttgagagagtggatcagttc
aagaaagtgttgttctctcttggtggctctttcctctactatgcagaccgcttcaaaatt
tacagtgctttctgtgccagccacacaaaagtccctaaagtcctcaccaaagctaaaaca
gaccctgagtttaaggcattccttgccaagaggaacccaaggcagcaacactcatccact
ctggagtcctacctgatcaagccaatccagagggtactgaaataccctctgctgctcaga
gagctctactgtctcaccgaccctgacagcgaggagcactatcatctcaatgttgctatt
aaggcaatgaataaagtagccagccacatcaatgagatgcagaagatccatgaggagtat
ggagctgtgtttgaccagctcatcagcgagcagagtacagacaagaaagaggtggctgat
ttgtctatgggtgacctattactgcatgccactgtggtttggatcaatcctccagcatct
ctgatgaagggaaagaaagacccagagcttgctgcctttgttttcaagacagccatcgtt
tttgtgtacaaagattgctccaagcagaagaagaaaattggaacatctcacagaggcttt
gtttcggatgagagagacccttttcgattcaggcacatgattccttccgatgctctccaa
gtccgcaatactgccaattcagatggaacagctgtgtgcgagatagttcacataaagtca
gagtctgaagggaggccagagaggtctttccatctatgctgcagctcctctgaaagtaag
agggacttcctgaaaacagtgcactctgtcctaagggacaaacagcgtcggcagctgtta
aagacagagagtttgcctcttaatcagcagtacattccatttggagggaaacgctttttc
gcactgaaaggagtcaggcccatgaacagagcagtttcaactccacctggaaacctcggc
cgaaaaagacttgtacgcaaccgcttcaccatcaacaccgacattgtttttgacaactgc
tccagccaggactccacagattttcctcagagacatcatcccttgccatcccagaataat
caccaggctgatggagacaccaaccactgggtggaggagcagtttgacctgcagctgtat
gacagacagacggacgtaaaggagacagacatcctcagcgatgatgatgaatactgcgag
tctgtcaagggttcctcagctgagcccagcctggaagagtctttcgaagctcttattgct
gaagtagaggaggagcagaaggaggaggacaaaaaggaggaagacagtgcttccaacaga
ggttcaaagaccaagctcccagaaaattcccttggccaactaaggttgaccccgctacgc
aagcagtgtgctgtagagggcgatgtggctcagaaggaggtggaggttatctgggttcgc
agagatgattttaacagtggctgtggcactgatatcttctga
DBGET
integrated database retrieval system
