Pangasianodon hypophthalmus (striped catfish): 113543515
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Entry
113543515 CDS
T05759
Symbol
smpd1
Name
(RefSeq) sphingomyelin phosphodiesterase
KO
K12350
sphingomyelin phosphodiesterase [EC:
3.1.4.12
]
Organism
phyp
Pangasianodon hypophthalmus (striped catfish)
Pathway
phyp00600
Sphingolipid metabolism
phyp01100
Metabolic pathways
phyp04142
Lysosome
phyp04217
Necroptosis
Brite
KEGG Orthology (KO) [BR:
phyp00001
]
09100 Metabolism
09103 Lipid metabolism
00600 Sphingolipid metabolism
113543515 (smpd1)
09140 Cellular Processes
09141 Transport and catabolism
04142 Lysosome
113543515 (smpd1)
09143 Cell growth and death
04217 Necroptosis
113543515 (smpd1)
Enzymes [BR:
phyp01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.4 Phosphoric-diester hydrolases
3.1.4.12 sphingomyelin phosphodiesterase
113543515 (smpd1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Metallophos
ASMase_C
Motif
Other DBs
NCBI-GeneID:
113543515
NCBI-ProteinID:
XP_026797587
LinkDB
All DBs
Position
Unknown
AA seq
599 aa
AA seq
DB search
MNTVCLITVAGLFLASLGSSAPLHDDVDMADLMAVNTLDGFKVHFSWRNISCPVCKAIFT
VVDIALLSDTNMEHVARAVGEACVHLHLADENVCREITELFRDDFIRALQESLLWPSEAC
ALLVGPSCGHFDIYAPWNITLPRVPKPPVIPPPIPKPGSPQSRVLFLTDIHWDAEYSEGS
AADCKQPLCCRDESGRANWRHRAAGHWGTYSKCDLPLRTVENLLQNIAKAGPWDWVYWTG
DIPAHNVWSQTRAQQLNELTTISRLIRKYLGPDVTVYPAVGNHESTPVNSFPPPFVHGNR
SSRWLYDTMAEEWAPWLPAQALVTLRRGGFYTAQVQPGLRVASLNMNFCARENYWLMVNS
TDPADQLQWLVHILQEAENKGEKVHIIGHIPPGLCLSSWSWNYYHIVNRYESTITGQFFG
HTHFDEFQMFFDEETMTRAVGVAYIAPSVTTYVNLNPGYRVYYIDGNYPNSTRLVLDHET
FILNLTLANGFQNNSSWLPKPDPDPAWTLLYRASQAYGVPALFPADWDALVRTFFTNDRI
FQQFWYFMHKGHVSEPCKDVCKSTLICYLRSGRYDLLEQCDRIDGVKKLRGRSLRKTLC
NT seq
1800 nt
NT seq
+upstream
nt +downstream
nt
atgaacactgtgtgcttgatcacagtagctggtttgttcctggcctccctcgggtcgtct
gcacctcttcatgatgatgtggacatggctgacttaatggctgtaaacacactggatgga
tttaaagttcactttagctggcgcaacattagctgtccggtgtgtaaagctatcttcacc
gtggtggacattgcccttttgagtgacacgaacatggagcatgtggctcgagcagtagga
gaagcctgtgtccatttgcacttggcagacgaaaatgtgtgccgggaaattacggagctc
ttccgtgatgacttcattcgtgccctccaggagtctctgctctggccctcagaggcctgt
gccttactcgtgggaccctcatgtggccattttgacatctatgccccctggaacatcacc
ctgccccgtgttcccaaacctccagtgatccctccccctatacccaaacctggctcacct
caaagcagggtgctcttcctcactgatatccactgggatgcagagtactcagagggcagc
gcggccgactgcaaacagccattgtgctgccgggacgagtctggtagagccaactggagg
caccgtgctgcaggtcactggggtacctacagcaagtgtgacctcccattgcgtacagta
gaaaacctcctgcagaatatagccaaggcgggaccctgggactgggtctactggactggg
gacatccctgcgcacaatgtgtggtcccaaacgagggcacagcagctgaatgagctgacc
accatctccaggctcatcaggaagtaccttggacctgacgttaccgtgtacccagccgtg
ggcaaccacgagagcacaccagtcaacagctttcctcctccatttgtacatgggaatcgc
tcctcccgatggctgtatgacaccatggcagaagaatgggctccctggctgcctgctcaa
gctctggtgactctgcgccgaggaggtttctacacggcccaggtgcagccaggtctgagg
gttgcgtcgctgaatatgaatttctgtgcgagggagaactactggctgatggtgaactcc
acagacccagcggaccagctccagtggctcgtacacatcctgcaggaggctgagaacaag
ggagaaaaggtgcacattattggccacatcccccctggactctgtctgagcagctggagc
tggaactactatcacatagtcaacaggtatgagagcactataacaggacagttttttgga
cacacacactttgatgaatttcagatgttttttgatgaagagacaatgacccgagcagtg
ggggtggcttacattgctccaagcgtaaccacttacgttaacctgaatccaggctaccgt
gtatattatattgatggtaactaccccaacagcactcgtctggtcctggatcatgagacc
tttatcctcaacctcaccttggcaaatggttttcaaaataactcctcatggttgcccaaa
cctgacccggacccagcgtggacattgctgtaccgggcctctcaggcctacggtgttcct
gcattgttccctgctgactgggatgctctggtccgaaccttctttaccaatgaccgcatc
ttccaacaattctggtactttatgcacaaaggccatgtgtcggagccctgcaaggatgtg
tgtaagagcacgctgatctgctacttgcgcagtggccgttatgacctgctagaacagtgt
gatcgcattgatggagtcaagaagctgaggggacgttctctgagaaagactctctgctga
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