Pangasianodon hypophthalmus (striped catfish): 113543548
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Entry
113543548 CDS
T05759
Symbol
ttc3
Name
(RefSeq) E3 ubiquitin-protein ligase TTC3 isoform X1
KO
K15712
E3 ubiquitin-protein ligase TTC3 [EC:
2.3.2.27
]
Organism
phyp
Pangasianodon hypophthalmus (striped catfish)
Brite
KEGG Orthology (KO) [BR:
phyp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
phyp04121
]
113543548 (ttc3)
Enzymes [BR:
phyp01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
113543548 (ttc3)
Ubiquitin system [BR:
phyp04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
113543548 (ttc3)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TTC3
wHTH_TTC3
TTC3_DZIP3_dom
TTC3_9th
TPR_1
TPR_2
TPR_17
TPR_11
PAM2
Motif
Other DBs
NCBI-GeneID:
113543548
NCBI-ProteinID:
XP_026797654
LinkDB
All DBs
Position
Unknown
AA seq
1723 aa
AA seq
DB search
MERREMLESEDSDIEEGQDVVRHKTKIIYQDTFPYIHMEPPDIIYERWGKINPDLRREAG
HLLHISVFWWHILYRQQDNHSTTAWAVDMGFLDSNVSNDLSLKRLHRIEILELILDTVEK
CLAGMDPERKARELIMISMSIRMEDDGLMKAVSWLNESGPPGLSRRILDLGSKQIRHQVL
DFVFSEYSRFIQVMSCSRKKMFRELSLNPEQWCLQKSEEMKNKGNEQFQKKKFDLAVKWY
TKAIKYHTNNHFLYGNRALCYIRCEKYLKAMGDGKRAILLQRDWAKGHYRFCDALFFLGA
RDKAVEANITAQGYCSADPEGMRDLQQQYSRFMTEISEGRSKGRACSEAEGKPKKTEAKK
GSSKRPEGACGVDHMAQHVHPDKAPEAAHSSDSAENKQKAEDIKQEEPSGKTVTDPQAED
VFKDPESEMGDRKARKKAASGIPEKQSVRNKQPPTQEKPQSSSSSSSEVCSKEQFCAAVR
DAHIALSDQRCRNAEQSFSEALRILGSSGTKDLSITELDRTLLIYGYATALIEIGQPEEL
AEAQRQFEKLSSSANRTFQSLVHYGLGKVLLKENKFSKAKDEFLNALLMVQRQIMPGKLT
WPTTKVTVEETCPEYLKEQLERFIETCKFPPKPDAVCRHCLGQAFIYFTDPDFKGFIRLS
CCQSCKVEYHINCWKKFKAASFSDKNDKDFLQDLCFTPDCTGTICRFVIFDSTGLIKCEF
KSPISKSKVPGMRVKQKCTSLKKLKSKEERKLRRKQQRLATSVIQNESNSLKIEDKTENG
ADKGIDQSSFKDCAVYGDRVLHQIDKNRDLFNDESHNISSMLVCLRPWMKLDEDKGHVSI
LKDRAEPRVLRELVDLLLERKNRVWARVFLHNLSGCQDVKPKVHEWAQQLNNAGLKAAEN
FIGQFGDELEKLNLSSLLESPPLHDVFSNKGFPLIEYLRQAPPQEMRLFIWTLEEYREHY
PSWFTILDDYFEMDAVCLVLKKTEKDDLLSSVYKSKSKNRKKKQKEPKSVLLLSGIRRDE
EDDFFFEEDSLMLLDGDDPFSVPDNLREQVAEFEGQYVTSGYLKHYKRFLDNDPDPTKES
LYDYFAQILEEHGPLEVSDQLLVGELKNFPPEAQQKIEAAGGLEHFLLESLRFVIYDGII
GLTSHAVCLQHTVDDDAFLLANFPPHTWSKVDSEPKGSSHLNPTAKEFLPQTKHLSLNDS
SESYDHATCPVLPSPYVFPPQISQNLNYTFGLQDMPGTVKPGVQEAEYHDYFPDVPLDAF
NAEALSSVNNYIHFKEAICHNSKTIFVQTVWGNKDTRDDVAINTEPYAQFEKNRGDMTQT
EKNNIKFEKRIQNLKEMLKAFQNERGESCSALEAEVREINQHIEISNKELTLFQQKLEDE
VRKDQQEKRDHQEMLKVLKGEIKELVNFQESISKLIQDKNVEYQKELDHFLAVSNQWAAE
KMSLEDKIKKYRDLCAKATSRSLAGQVSVLKNRRERGLRGLRKYLSNGKAILKHLTEISP
TYPSASLGSITEAWKSFIQEVEEKIVRAETQYEEQIEFVKKGTSLSSLPAVGIPSTPALP
LVPAFLQPLSSPQPVFQHAHPHTPYGVQQHPARPQTHMAVNTHHAMHTPPAASENAAAPA
PPAASGPVQPPQPLAVFERILDRLSSMFPHYSKSVLTKFIQEVRVMNGGSLSMMKYEEVI
NRAAQLILDHQEHSQVRQLVLKPIKITRQNTEQFIALHSTTIL
NT seq
5172 nt
NT seq
+upstream
nt +downstream
nt
atggaaagacgtgagatgttggagtctgaagattctgacattgaggagggacaggatgtg
gtccgacataagactaaaattatttatcaggacacatttccatacatccacatggagcca
cctgacattatttacgagcggtggggcaaaataaatcccgatctgagaagagaagccgga
cacttgctgcacatctcggtgttctggtggcatattctgtaccggcaacaggacaatcac
agtactacagcctgggctgtggacatgggcttcttggactccaatgtttcaaatgatttg
agtttgaaaaggctgcacagaattgaaatcttggagctcattcttgacactgtggaaaaa
tgtctggcaggcatggatcctgagaggaaagcgagagagttgataatgattagcatgtct
attagaatggaggatgatggtcttatgaaggcagtcagctggctaaatgaatctggtcct
ccaggtctaagcaggaggatccttgatcttggatcaaagcaaatacgccaccaagttcta
gattttgtattttctgagtattctcgtttcatacaggtgatgtcatgtagcagaaagaag
atgtttagggagctgtcgttaaatccagagcagtggtgtttacagaaaagtgaagaaatg
aagaacaaagggaatgagcaatttcagaagaaaaagtttgatcttgcagtgaaatggtac
acaaaggccattaaataccataccaacaatcacttcttgtacgggaacagagcactctgc
tatattcgttgtgaaaaatacctgaaagcaatgggtgatggtaagcgagcgattctactg
cagcgagactgggcaaagggccactaccgtttctgtgatgctttgttcttccttggagct
agagacaaagcagtagaagccaacattacagctcagggctattgcagtgctgatccggag
ggaatgagagacctccagcagcagtacagtcgcttcatgactgagatttctgagggcaga
agtaagggcagagcatgttcagaagctgaaggaaaaccgaagaaaactgaggctaaaaaa
ggatccagtaaacgacccgagggagcatgtggagtagatcacatggcccaacatgttcat
ccagacaaagccccagaggcagctcatagctctgatagtgcagagaataagcagaaagca
gaagacataaagcaggaggaaccatcagggaagactgtgactgaccctcaggctgaggac
gtctttaaagaccctgaaagcgaaatgggggaccgaaaggccagaaaaaaggcagcgtcg
ggcattccagagaaacagtctgtaaggaataaacagccacctacacaggaaaagccccag
agcagcagcagcagcagcagtgaagtgtgcagtaaggagcagttctgtgctgcagtacgg
gatgctcatatagcactcagtgaccagcgttgccgcaacgcagagcagtctttctctgag
gcactcaggattctgggctccagtgggaccaaggatctcagcataactgaactggacaga
actttgttgatctatggttatgctacagccctgatagaaattgggcagcctgaggaattg
gcagaagctcagcggcagtttgaaaaactaagctcttcagcaaacagaacgttccagtcc
ttggttcattatggtttaggaaaggtgttactgaaggagaataaatttagcaaagccaaa
gatgaatttttgaatgctctgttgatggttcagaggcagatcatgccaggaaaactgacc
tggccaaccactaaagtaactgttgaagagacctgtcctgaatatttaaaggagcagctt
gagaggtttattgagacctgcaaattcccacctaagccggatgcagtttgccgacattgc
ttgggacaagcctttatatatttcacagatccagactttaagggcttcattcgattgtca
tgctgtcagagctgcaaggtggagtatcatatcaattgctggaaaaagttcaaagctgct
tcattttctgacaagaatgacaaggatttcctgcaggatttgtgttttactcctgactgt
actggtacaatctgtcgatttgtcatatttgactcaactggtcttattaagtgtgagttt
aaatcacctatttctaaaagcaaagttcctgggatgagagtcaaacagaaatgtacaagt
cttaagaagctcaaatctaaagaggaacgaaagctgcggcggaaacaacagaggctggct
acatccgtaatccagaatgagtcgaacagtttaaaaatagaagataaaactgaaaacgga
gcagacaaaggcattgaccaatcatcgttcaaggattgtgctgtatacggagatcgtgtt
ttacaccaaattgataaaaacagagatctttttaacgatgagagccacaatatttctagt
atgctggtgtgtctgagaccgtggatgaagttggatgaggataagggtcatgtaagcata
ttgaaggaccgtgcagaaccacgggttctcagggagctggtggatctgctgttggagaga
aagaacagggtttgggccagagtctttcttcataacctcagtggctgccaagatgtcaag
cctaaagttcatgaatgggctcagcaacttaacaatgctggtctgaaagctgctgagaac
tttattggtcaatttggtgatgaactggaaaaactgaatctctcttccctgttggagtct
cccccactacacgatgtattttctaataagggctttcctttaatagagtacctgagacaa
gctccaccacaggaaatgcgcctctttatttggactctagaggaataccgagagcactac
ccttcctggttcactatccttgatgactattttgaaatggatgcagtatgtttagtgtta
aagaagaccgaaaaagatgacctcttaagttctgtttataagagtaaaagcaaaaatcga
aaaaagaagcagaaagaaccaaagtctgtcttgcttctatcggggatacgaagagatgaa
gaggacgatttcttctttgaggaagattcactgatgctgctcgatggtgatgatcctttt
agtgttccagataatttgagggagcaggttgcagagtttgaggggcagtatgtcacctcg
ggataccttaaacactataagagatttctggacaacgacccagatccaactaaagagagt
ttatatgattactttgcacagattctggaggagcatggccctctcgaggtgtcagaccaa
ctgcttgtgggcgagctgaagaactttccccctgaagcgcagcaaaagattgaagctgct
ggaggacttgaacatttcctgcttgagtcacttcgatttgtaatttatgacggcatcatc
ggactgacgtcacatgctgtgtgcttacagcacactgtggatgatgatgcctttctattg
gcaaactttccccctcatacttggagcaaggttgattcagagcctaaaggatcctcccat
ctcaaccccacggccaaagagttcctgccccagactaaacatttgagtctgaatgacagc
agtgaatcttatgatcatgctacttgtcctgttctcccaagtccttatgtttttccccct
caaatttctcagaatttaaattatacatttggtctgcaagatatgcctggaactgtaaaa
cctggtgtacaagaagcagagtatcatgattacttccctgatgtcccactggatgcattt
aacgctgaggctctcagctctgttaataattatattcattttaaagaagccatatgtcat
aatagtaagaccatttttgttcagacggtttggggtaacaaagataccagagatgatgtt
gccattaatacagaaccatatgcacagtttgaaaagaacagaggagatatgacccaaaca
gaaaaaaacaacataaaatttgaaaaacgcatccaaaatttgaaggaaatgcttaaggct
tttcaaaacgaaagaggagagtcatgttctgcacttgaagctgaagtgagggaaattaat
cagcacatagagatttccaacaaagaactgactttgttccaacaaaagcttgaggatgag
gtacggaaagatcagcaggagaagcgagaccaccaagagatgctgaaggttttaaagggt
gagatcaaagagctggtgaattttcaggagagtatttccaagctaatccaggataagaat
gtggagtatcagaaagaactggaccatttccttgcagtaagtaaccaatgggcagctgag
aagatgagtttggaggataaaataaagaaatatagagatctgtgtgcaaaagcaaccagt
cgatcactggcaggacaagtgtccgtcctgaaaaataggcgagaacgtgggctgcgtggc
ttgaggaagtacttgtcaaatgggaaagcaattctaaaacacctgactgagatatcaccc
acgtatccatctgcaagtctcggttccatcactgaggcctggaaatcattcatacaggaa
gttgaggagaagatcgtaagagccgagacgcagtatgaagagcagatagagtttgtgaaa
aagggcaccagcttgtcctctctccctgcagttggcataccaagcacccctgctcttcct
ctggtaccggcctttcttcagccattgtccagtccgcagccagtttttcagcatgcacac
ccacacaccccatatggagttcagcagcatcctgccagacctcaaacacacatggcagta
aacacacaccacgccatgcacacacctccagcagccagtgagaacgctgctgctccagcg
ccccctgcagcctcaggtccagttcagcctccacagccgctcgctgtatttgagaggatc
ctggatcgtctcagctccatgttccctcactacagcaaatcggtcctgacaaaatttatt
caagaggtccgcgttatgaacggtggcagtctgagtatgatgaagtatgaagaagtgatt
aacagagctgctcaactcatccttgaccaccaggaacactcacaagtgagacagctggtc
ttaaaacctataaaaataaccagacaaaatacagagcagtttattgcattgcacagcaca
accatcctttga
DBGET
integrated database retrieval system
