Pangasianodon hypophthalmus (striped catfish): 113543877
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Entry
113543877 CDS
T05759
Name
(RefSeq) sodium channel protein type 4 subunit alpha B-like
KO
K04837
voltage-gated sodium channel type IV alpha
Organism
phyp
Pangasianodon hypophthalmus (striped catfish)
Brite
KEGG Orthology (KO) [BR:
phyp00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
phyp04040
]
113543877
Ion channels [BR:
phyp04040
]
Voltage-gated cation channels
Sodium channel, voltage-gated (Nav)
113543877
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ion_trans
Na_trans_assoc
IQ_SCN5A_C
PKD_channel
GPHH
Motif
Other DBs
NCBI-GeneID:
113543877
NCBI-ProteinID:
XP_026798198
LinkDB
All DBs
Position
Unknown
AA seq
1793 aa
AA seq
DB search
MARRRKISLLEAWVRNRAAHPKKAENLKLWPRQLALLRDPELVSSLVLQNVKMACLLPTA
GTNVFRRFTPESLAECERLKAEEDAEQAQRKAQKIEIPEEELPKPSRDLEAGKSLPFIYG
DPPPELLNVPLEELDPYYKTKKTFIVISRGNTINRFNVEPACYILTPFNPIRRVAIRILI
HSLFSMFIMVTILSNCVFMTMSNPPDWSKIMEYVFTGIYTFEALVKVLSRGFCIGDFTFL
RDPWNWLDFMVISMAYVTEFVDLGNVSALRTFRVLRALKTITVIPGLKTIVGALIQSVKK
LGDVMILTVFCLSVFALIGLQLFMGNLRHKCILWPPHGLNDTTDTNSTFNFEEFLNNPEY
YYYLPGSIDPLLCGNSSDAGMCPEGYTCMKAGRNPNYGYTSYDNFGWAFLALFRLMTQDF
WENLFQLTLRAAGKTYMIFFVVIIFLGSFYLINLILAVVAMAYAEQNEATRAEAKEKEEE
YARIMEQLKKQSELKRVMMKESMTSLSSRKKGDGSAECDENNEEHGIALKHRESIEVSKS
NGSKGSLDLIEVPNQHNRKASAVSHTLEELEELERPCPPCWYKFADIFLKWNCCTPWIRF
KKLVYFIVMDPFVDLGITICIVLNTVFMAMEHYPMTHEFEHVLSVGNLVFTGIFTAEMVL
KLIAMDPYNYFQVGWNIFDSIIVTMSLVELGLANVQGLSVLRSFRLMRVFKLAKSWPTLN
MLIKIIGNSVGALGNLTLVLAIIVFIFAVVGMQLFGKSYRDCVCKISESCELPRWHMTDF
FHSFLIVFRILCGEWIETMWDCMEVAGQAMCIIVFMMVMVIGNLVVLNLFLALLLSSFSG
DNLASSDEDGEMNNLQIAISRISRGIDWVKTLIITHVRRLFGLKPKEEEKKGNDLVLNHM
DTGESGDETKEELKQLDGALRMAIVPVAKGESDVESPDDDDSASENEEKIDEKKKLKDAD
DSSSCSTVDKPPEVEEADSEDEPDPITPVDCCTEKCIRRCPCLDVDVTKGKGKAWWNFRK
TCYAIVEHNYFETFIIFMILLSSGALAFEDIYIEQRRVIKIILEYADQVFTYVFVVEMLL
KWFAYGFKTYFTNAWCWLDFLIVDVSLISLTANILGYSELGPIKSLRTLRALRPLRALSR
FEGMRVVVNALVGAIPSIFNVMLVCLIFWLIFSIMGVNLFAGKFYYCFNTTSEEYFLHEE
VNNKSECFELIINNHTEVRWMNTKVNYDNVGMGYLALLQVATFKGWMDIMYAAVDSLEVE
EQPQYEANLYMYLYFVIFIIFGSFFTLNLFIGVIIDNFNQQKSKLGGQDLFMTEEQKKYY
NAMKKLGSKKPQKPIPRPQNCFQGFIFDIVTKQFFDILIMALICLNMITMMVETDDESQE
VEEILYFINFVFIVIFTGECVLKLLALRQYFFHVGWNIFDFIVVILSILGLVLADVIEKY
FVSPTLFRVIRLARIGRVLRLIRGAKGIRTLLFALMMSLPALFNIGLLLFLIMFIFSIFG
MSNFAYVKKDAGIDDMFNFETFGNSIICLFMITTSAGWDGLLSPILDSRPPDCDPDIENP
GTDVKGNCGNAGVGIVFFCSYIVMSFLVVVNMYIAIILENFNVATEESSEPLCEEDFEMF
YETWEKFDPDASQFIEYNALSDFCDTLKDPLRIPKPNTVKLISMDLPMVPGDKIHCLDIL
LALTTEVLGESGEMDMLKSSMEEKFMANNPSKVSYEPITSTLRRKQEEVAAKVIQRAYRK
YKLKSSCNKGTYSFRQKSEKPPCVALQNEVVLHSAPFIIPDPTYVDNLRESIV
NT seq
5382 nt
NT seq
+upstream
nt +downstream
nt
atggcaagaaggcgaaagatctcactgttggaggcgtgggtcaggaatcgggccgcacat
ccgaagaaagcagaaaatctgaaactatggccgcgacaattggcgttgctgagagacccc
gagctggtttcgtctctcgtcctgcagaatgtgaagatggcgtgtttgctccccaccgca
ggcaccaatgtgttccgccgcttcacgccggagtcgctggctgagtgtgagcgactcaag
gctgaggaagatgctgaacaggcgcagaggaaagcccagaagattgagatcccggaggag
gagctgcccaaaccctccagagacctggaagctggaaaatccttaccttttatctatgga
gaccctccacctgagctccttaacgtccctctggaagagctcgatccctactacaaaact
aagaaaactttcatcgtgatcagcagagggaatacaatcaacaggttcaacgtggagcca
gcctgttacattctcaccccctttaaccccatccgcagggttgccatccgaatactcata
cactcattgttcagcatgttcatcatggtaacgatcctttccaactgtgtgttcatgacg
atgagcaacccgccagattggagcaaaattatggagtacgtgtttacagggatctacacc
ttcgaggctctggttaaagtcttgtccagagggttctgtatcggagacttcacattcctt
cgagatccatggaactggctggatttcatggtgatcagcatggcgtatgtcactgagttt
gtggacttgggaaatgtctcagctctgaggaccttccgtgtgcttcgagccctgaagaca
atcactgtaattcctggtctgaaaaccattgtgggtgcgctgattcagtctgtgaagaag
ttgggagacgtcatgatcctgaccgtcttctgtctcagcgttttcgccctcattggcctg
cagctgttcatgggaaatctgcgccacaagtgcatcctctggcctcctcacggcttaaat
gataccacagatacaaacagcactttcaactttgaagagttcctcaacaatcctgagtat
tactattacctgcctggtagcatagatccactgctctgtggaaacagctcggatgctggg
atgtgtcctgagggatacacgtgtatgaaagcggggaggaatccaaattacggatacacc
agctatgacaacttcggctgggccttcctcgccctcttccgcctcatgacacaagacttc
tgggaaaacttgttccagttgactctccgggcagcagggaagacctacatgatcttcttc
gtggtcatcatcttcttaggttctttttacctgatcaacctgattttggctgtggtggca
atggcgtatgcggagcagaacgaagccactagagctgaagctaaagagaaggaggaggag
tatgccaggatcatggaacagctcaaaaagcaatctgagctaaagagagtgatgatgaaa
gaaagcatgacctcgctctcgagcagaaagaaaggtgatggcagcgctgagtgtgatgag
aataatgaagagcatggcattgctttgaaacacagagagtctattgaggtgtccaaatca
aatggatccaaaggaagtttggacttaatagaagttcctaaccagcacaacaggaaagcc
agtgcagtgagccatacactagaagaattagaagagttggaaagaccatgcccaccttgc
tggtacaagtttgcagacattttcctaaagtggaactgctgtacaccatggatcagattc
aaaaaattggtgtatttcattgtgatggatccttttgtggacttgggcatcactatctgc
attgtactaaacactgtgtttatggccatggaacattatccaatgactcatgagtttgaa
catgtcttgtctgttgggaatttggtgtttacaggcatcttcacggctgagatggtcctc
aaactcatagcgatggacccatacaactacttccaggtcggctggaatatatttgacagc
atcatcgtgaccatgagtcttgtggaactcggcttggctaatgtacaagggctctctgtg
ctccggtccttccgacttatgcgtgtcttcaagttggcaaagtcatggcctaccctgaac
atgctgattaagatcattggtaactctgtgggtgccctggggaacctgaccctcgtccta
gccatcatcgtcttcatctttgctgtggtgggcatgcagctgtttgggaagagctacagg
gactgtgtttgtaaaatctctgagagctgtgaactgccacgctggcacatgacagacttc
ttccactcgttcctaattgtgtttcggatcctgtgtggcgagtggattgaaaccatgtgg
gactgcatggaggtggcaggccaggccatgtgcattatcgtcttcatgatggtcatggtg
attggaaacctggtggtcctgaatctcttcctggcgttgctgctcagctccttcagtgga
gacaatttggcatcgtcagacgaagatggtgaaatgaacaacctacagattgccatatca
agaatcagcaggggcattgactgggtcaagaccttaattataacacatgtaaggcgtttg
tttggcctgaaaccaaaggaagaagagaagaaaggaaatgatttagtcctgaaccacatg
gacacgggtgagtcaggggacgagactaaggaggagctgaaacagcttgatggtgctctt
agaatggctattgttcctgtcgcaaagggagagtctgatgttgaaagccctgatgatgat
gacagtgcttctgagaatgaagagaagatcgatgaaaaaaagaaactgaaagatgcagac
gactcgtccagctgcagcaccgtggacaaacctccagaggtggaagaggcggattcagag
gatgaaccagatcccatcaccccagtggactgctgcacagagaaatgcattagacgctgc
ccgtgcctggatgtggacgtcaccaagggcaaaggaaaggcatggtggaacttccgtaag
acctgttacgccattgtggagcacaactattttgagaccttcatcatcttcatgattctc
ctcagcagcggtgccttggcatttgaggatatttacattgagcagcgacgagtgattaaa
atcattctcgaatatgcagatcaggtcttcacctacgtttttgtcgtcgagatgctcctg
aaatggtttgcgtatggtttcaagacctatttcaccaatgcgtggtgctggctggacttc
ctcattgttgatgtctccctgatcagcctgacagctaacattctgggttactccgagctc
ggacccatcaaatccctgaggaccttgagggctctgaggccacttcgtgccctgtccaga
tttgagggaatgagggtggtggttaacgccctggttggagccatcccctccatatttaac
gtgatgctggtgtgtctgatcttctggctgatcttcagcattatgggtgtgaacctgttt
gctggaaaattctactattgctttaacacaacctctgaagagtatttcttacatgaagag
gtgaacaacaaaagtgaatgcttcgagctgataataaataatcatacagaagtgcgatgg
atgaacacaaaggtcaactacgataacgtgggcatgggctacctcgccttgctgcaagtg
gcaacatttaaaggttggatggacatcatgtatgctgctgtggattctcttgaggtggag
gagcagccacaatatgaggcaaacctctacatgtacctgtactttgttattttcatcatc
tttgggtccttctttaccctcaatttattcatcggtgtcatcattgataacttcaaccaa
caaaaatcaaagttaggaggacaggacctcttcatgacagaggagcagaagaaatattat
aacgctatgaagaaactcggctctaagaaaccacagaagccgatcccacgcccccaaaat
tgtttccaaggcttcatcttcgacattgtcacaaagcagttctttgacatcctgattatg
gccttgatctgtctgaacatgatcactatgatggtggagacggatgacgagagccaagag
gttgaagaaatcctgtacttcatcaacttcgtctttatcgtcatattcactggagagtgt
gtgctcaagctcctcgccttgcgacagtatttctttcacgttggttggaatatttttgat
tttattgtggtcattctttcaatcttaggcttagtcctagcggacgtcattgagaagtac
tttgtgtcacccacgcttttccgtgtcatccgacttgccagaatcggacgtgttctgcgt
ctgatccgaggtgctaaaggcatccggacgctgctgttcgccctgatgatgtccctccct
gccctcttcaacatcggcctcctcctatttttaatcatgttcattttctccatattcggc
atgtccaactttgcctatgtgaaaaaagatgccggcatcgatgacatgttcaattttgag
acctttggaaacagtataatatgtctgttcatgatcacaacgtctgccggctgggacggg
cttctgtcccctatcctcgacagcagacctcccgactgcgacccagacattgagaatccc
ggcacagatgtgaagggtaactgtgggaatgctggagtgggaatagtcttcttttgcagc
tacattgtgatgtccttccttgtggtggtcaacatgtacatcgccatcattctggagaac
ttcaacgtggcaacggaagaaagcagcgagcctttatgcgaggaagacttcgagatgttc
tacgagacctgggagaagtttgatccagatgcttcacagttcatcgaatacaatgcgctg
tccgatttctgtgacaccctgaaagatccgctgaggatcccgaagccgaacacggtcaag
ctgatctccatggacctgccaatggtacctggggacaagatccactgtctggacatcctg
ctggctctcacaaccgaggtgctcggcgagtccggggaaatggacatgctcaagtcgagt
atggaggagaaattcatggcaaacaacccctctaaggtgtcgtacgagccgataaccagc
actcttcgacggaagcaggaggaagtggctgctaaggtcatccagagagcctaccgcaaa
tacaaactcaagagttcttgcaataagggaacctacagcttcagacaaaagagcgagaag
cctccatgtgtagctctgcagaatgaggtggtcttacactctgcccctttcatcatccct
gacccgacctacgtggacaacttgagggagtccattgtgtag
DBGET
integrated database retrieval system
