Pangasianodon hypophthalmus (striped catfish): 113545579
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Entry
113545579 CDS
T05759
Name
(RefSeq) nuclear pore membrane glycoprotein 210-like
KO
K14314
nuclear pore complex protein Nup210
Organism
phyp
Pangasianodon hypophthalmus (striped catfish)
Pathway
phyp03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
phyp00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
113545579
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
phyp03019
]
113545579
Messenger RNA biogenesis [BR:
phyp03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
113545579
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ig_NUP210_13th
Ig_NUP210_3rd
Ig_NUP210_15th
Ig_NUP210_14th
Ig_NUP210_5th
Ig_NUP210_16th
Ig_NUP210_9th
Ig_NUP210_6th
Ig_NUP210_2nd
Big_2
Ig_NUP210_1st
NUP210_Ig
KxDL
SHE3
Motif
Other DBs
NCBI-GeneID:
113545579
NCBI-ProteinID:
XP_026800779
LinkDB
All DBs
Position
Unknown
AA seq
1553 aa
AA seq
DB search
MAELGFRSVLLLLLPLLLLTSGFSHHSQAAKLNIPKVLLPLARSTKINFTLEATEGCYRC
NGSLVRRVLKFSESTYTPPTYISEMERVGKQGDIILVSGIKTGHAKLKAKIQEPLYTHVG
AAEVQLLILENILLSPAYDVYLLAGTSIKYKVQKIRQGKITELSMPCDQYELQLKNSVVA
PGGDAYSVVAELDPSTSTVFALQHGHANIVLDHKTLGMKGASRLPNSTLYVVEPGYLESS
VRVLIRSFLSRSQRGTEHALPVPVRNEQDVEIYNPIVLSPSILTFPWQPKEGAYQYTIKA
SGGSGNFSWSSSNAAVATVTVKGVMTTVRDVGVSTVYAHDLRNPLHYGEMKVYVIEPVRM
EFAPCVVEARVNLTLELPLRIFGQLSSEDGEKVTLSDCSHFDLQVQMENHGVFQLQDGQA
ELTLREGSGYFFVNTSVRGIADVEFQESRGTAEVVPVHPGVLQVMVHDLCLTFPAPATAT
VHVSDILEVYVRVVDKVEIGKSVRAYVRVLDDNKKPFLAKYFSHMNLKLKAASSIVSLQP
LSEYSEKDTATFLVKGVVIGQTSISAVVTDKTGRTISSAPQQIEVFPPFRLLPRKVTLII
GAVMQITSEGGPQPQSNILFSLSDSNIASVNSIGLVRGVAVGNMTVTGVVQAVDTESGKL
VVISQDQVEVEVVQLKGVRIRAPITRMKTGAMMPVYVMGLTSSETPFSFGNALPGLTFHW
SVTKRDILDVHTRHSEASIKLSAEHNFAMSVSGRSKGRTGLKVVVRATVPEAGHLWGNKL
ELSDEIQIQVYEKLQLLNPEVQAEEILMSPNSLLKLQTNRDGVGSLSYRVLDCPDKAPLV
HVDDNGHLTSGSLTGTASLQITAQESFGVNQTIILAVKVVTVSYLRLSTSPVFYTSNKEM
LSAVPLGSVLTFTVHFHDSSGEALHSHNSQLTFSTNRDDLVQVGKGVSNSSLTVRTVNVG
LTLLSVWDSEQSSLVDYVALPVHHAIQPVDAHDLVPADVVCFSAQLVSHGDGLSGTWSSS
SSAILEIHPKTGVAVARDVGTVTVYYEIPGHLRTYREVVVNRVSRTVATVPSGSVRNERE
TKVLLTTRERGTNLIGSCSLAQLESVASLQPEKSISCRLQFTSDAVDFSAHDVYHTHTTF
DTSTGVYSCVLTLGLMTEQQVKVLGVSMSGVRVEADVEGSRFSGERVSAELQVNPGFYSD
QTHIILSSQHTTAEFSVYGATGLLQHLQVRQHTSITPASQLQSRLHHTSNHASIILPAAG
VVGGEGVGILQQFMDSYQVMFFTLFALLAGTAVIVIVCHAIFSPRDPPVHPAFIQRTPPA
PGRGRGGRGGGKFPARALGVSGTQQYGGVGLGRRAAAEPDCANGKKPGCWSSLMGSRVME
SPGPGSGSGSGSGEKPSKAAECLSELNRIIEAQHELLERQKTRIAELELQVAELRSRNAR
VHEEYERHLRTCPLQHQHQQHQHQQHNNNPSISTSALSALTAIQEKPEYSGSMRMVRRHA
SLPVETSSSSSVSALCRRTFPCRQWKSTSFSVLGGSAIDNNKFKSEMFSEVLA
NT seq
4662 nt
NT seq
+upstream
nt +downstream
nt
atggcagaactcggtttccggtcggtgctcctgctcctgctgcccctgctgctcctgact
tccggtttctctcatcacagccaggctgctaaactcaacatccccaaagtcctgctccct
ttggccaggagcacaaagatcaacttcaccctggaggccactgaaggctgctacagatgt
aacggaagtctcgtacggcgagtcctgaagttctccgagtcgacctacacgccgccgacg
tacatctcggagatggagagagtcgggaagcagggagatatcatcctggtgtctgggatt
aaaaccggccacgcaaaactgaaagctaaaatccaggagcctctttacacgcatgttgga
gctgcagaggtgcaactgctgattctggagaacatcctcctgagtcccgcctacgacgtc
tacctgctggccgggacctccatcaagtacaaggtgcagaaaatccggcaaggaaagatc
acagagctctccatgccgtgtgatcagtacgagctccagctgaagaacagcgtcgtcgct
cctggaggagatgcgtattctgtggtggccgagctcgatcccagcacctccacggtcttc
gcccttcagcacggacacgccaacatcgtcctggaccacaagactctgggaatgaaagga
gcttcccggcttcccaacagcacgctgtacgtcgtggaacccggatacctcgagagttct
gtgcgcgttcttatccgctcttttctttcccgatctcagcgaggaaccgaacacgctctt
cctgttccggtgaggaacgaacaggacgtcgaaatctacaaccccatcgtcctgagtccc
tccatcctcacgttcccatggcaaccgaaagaaggagcgtatcagtacaccatcaaggcg
agcggaggaagcggaaacttcagctggtcttcctcaaacgcggccgtcgctacggtaacg
gtgaagggcgtgatgacgacggtgcgcgacgtcggagtgagtacggtgtacgctcacgac
ctgcggaacccgctgcattacggagagatgaaggtgtacgtgatcgagcccgtgaggatg
gagttcgctccgtgtgtggtggaggctcgggtgaatctcacgctggagctcccgctgcgt
atcttcggccagctgagctccgaagacggagagaaggtcacgctgagcgactgctcacac
tttgatttgcaggtccagatggaaaatcacggcgtgtttcagctgcaggacggtcaggct
gagctcacgctgcgagaaggctcgggttatttcttcgtgaataccagcgttcggggaatc
gctgacgtggagtttcaggagtctcgaggaactgctgaggtggttccagtgcaccccggt
gtcctccaggtgatggttcacgacctctgcttgacctttcccgcccccgccacggccacc
gtgcacgtgtcggacatcctggaggtttacgtgcgtgtggtggataaggtggagattggg
aagtctgtgagagcatacgttcgagttttggacgacaacaaaaagccgtttcttgccaaa
tatttctctcatatgaatctgaaactgaaagctgcatcatccatcgtgtctctgcaacct
ttatctgagtattctgagaaggacacggcgacgttcctggtcaaaggcgtggtgatcggt
cagacgagtatctccgccgtcgtgaccgataaaaccgggagaacgatctcatctgcaccg
cagcaaatcgaagttttcccgcctttcaggctgctcccgagaaaagtcacgctgattatc
ggggcggtgatgcagatcacatcagaaggaggtccacagcctcagtccaacatcctgttc
tccttgagcgactcgaacatcgcctccgttaacagcatcggtctggttcgtggcgtcgcc
gtgggcaacatgaccgttacgggagtcgtacaagccgtcgatacggaaagcggcaaactg
gtggtgatctcgcaggatcaggtggaggtggaggtggtgcagctgaaaggcgttcgaatc
agagcgccaatcacccggatgaagaccggcgccatgatgccagtgtacgtgatgggtcta
acgagcagcgagacgccgttctccttcggtaacgctcttccaggactcacgttccactgg
agcgtaaccaagagagacatcctggacgtccacacgcgccattcagaggcctccattaaa
ctttcagctgagcacaacttcgccatgagtgtgtcgggccgcagcaaaggccgcacagga
ctgaaggtggtggtgcgagcgacggttccagaagctgggcatctctggggcaacaagctg
gagctgagtgacgagattcagatccaggtttatgagaaactgcagctgctgaatccagaa
gtgcaagctgaggagattttaatgtccccgaactccttattaaaacttcaaaccaaccgg
gatggagtgggttctctgtcgtatcgggttctagattgtcctgataaagctcctctcgtc
cacgtggatgataacggccatctcacgtcaggctcgctgacgggcacggcgtccttacag
atcaccgctcaggagagcttcggggtcaaccagaccatcatccttgccgtgaaggtggtg
accgtgtcgtacctgagactgagcaccagtccagttttctacacctctaacaaagagatg
ctgtcggccgtcccgctcggctccgtcctcaccttcaccgtccacttccacgacagcagt
ggtgaagctctgcacagccacaactcccagctcaccttctccaccaacagggacgacctg
gtgcaggtgggtaaaggtgtgagtaacagctctctcacggtgaggacagtaaacgtgggt
ttgacgttgttgagtgtttgggattcggagcaaagcagcctggtggattacgtcgctctt
cccgtccatcacgccatccagccggtcgacgcccacgacctggtgcccgctgacgtcgtg
tgtttttcagcgcagctcgtcagccatggtgacggtctgtcaggaacgtggagctcttca
tccagcgccatcctggagatccatcccaaaacgggcgtggctgtagctagagacgtggga
actgtgacggtttattacgagattccaggacacctgcgcacgtacagagaggtcgtcgtg
aacagagtctccaggacggtcgcaacggttccctcgggttctgtgagaaacgagagagag
accaaagtgctcctgaccaccagagagcgaggaaccaacctcatcggaagctgctcgctc
gctcagttggaaagcgtcgcgtctctgcagccggagaagtccatcagctgccgtctgcag
ttcaccagcgacgccgtcgacttctccgcccacgacgtctatcacacacacaccaccttc
gacacaagcacaggtgtgtacagctgtgtgttgaccctcgggctgatgacggagcagcag
gtgaaggttctgggcgtgtccatgagcggagtgagggtggaggcggatgtggagggaagt
cgtttttcaggagagcgagtcagcgctgagctgcaggtgaatcccggattctactccgat
caaacacacatcatcctgagcagccagcacaccaccgccgagttcagtgtgtacggagcc
acgggactgctgcagcacctgcaggtacgtcaacacacctccatcacgcctgcatcacaa
ctccaatcacgcctccatcacacctccaatcacgcctccatcatacttcctgcagcgggc
gtggtcgggggagagggagtcgggatcctgcagcagttcatggactcgtatcaggtcatg
ttcttcacgctgtttgctctcctggcaggtacagccgtcatcgttatcgtgtgtcacgcc
attttctctccgagagacccaccagttcatcctgccttcatccagagaactccgcccgct
ccaggaagaggaagaggaggaagaggaggaggaaagtttccagctcgcgcacttggagtc
tccggtactcagcagtatggcggtgtcggactcgggcggcgcgcggctgcggaaccggac
tgcgctaacggaaagaaacccggatgttggtcgagtttgatgggaagcagagtgatggag
agtcccgggcccggttcaggttcgggttcgggttcgggtgagaagcccagcaaggcggcg
gagtgtctgagcgagctgaaccggatcatcgaggcgcagcacgagctcctggagcggcag
aagacgcggatcgccgagctcgagctgcaggtcgccgaactgcgcagccgcaacgcgcgc
gtgcacgaggagtacgagagacacctgcgcacgtgccccctgcagcatcagcatcagcag
catcagcatcagcagcacaataacaaccccagcatcagcaccagtgctctctctgcttta
acagccatccaggagaaacctgaatatagcggctcgatgaggatggtcaggagacacgcc
tcacttcctgtggaaacctccagcagcagcagcgtatcagcgttatgcaggagaactttt
ccctgtcgccagtggaaatccacttccttcagcgttttaggtggctctgcgatcgataat
aacaagtttaagtctgagatgttttcggaggttctagcctga
DBGET
integrated database retrieval system
