Pangasianodon hypophthalmus (striped catfish): 113545990
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Entry
113545990 CDS
T05759
Name
(RefSeq) H-2 class II histocompatibility antigen, A-F beta chain-like isoform X1
KO
K06752
MHC class II antigen
Organism
phyp
Pangasianodon hypophthalmus (striped catfish)
Pathway
phyp04145
Phagosome
phyp04514
Cell adhesion molecules
phyp04672
Intestinal immune network for IgA production
phyp05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
phyp00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
113545990
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
113545990
09150 Organismal Systems
09151 Immune system
04672 Intestinal immune network for IgA production
113545990
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
113545990
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
phyp04147
]
113545990
Exosome [BR:
phyp04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
113545990
Exosomal proteins of epithelial cells
113545990
Exosomal proteins of breast milk
113545990
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Ortholog
Paralog
GFIT
Motif
Pfam:
C1-set
MHC_II_beta
MMgT
Ig_3
C2-set_2
DUF4330
DUF1538
MLANA
DUF3185
Motif
Other DBs
NCBI-GeneID:
113545990
NCBI-ProteinID:
XP_026801471
LinkDB
All DBs
Position
Unknown
AA seq
276 aa
AA seq
DB search
MRLCTPSLLCMLLVLFTFKAVDGCYGQFYAQCYYTRDLVTIEFIYSWYFNKAEYLRYNST
TDRYTGYTVYGAKMAESLNLDPKNSLYFYVYTLCKHNSDKYSTNVLKRVKPEVTVRSLRS
ESDNLPAMLMCAAYDYHPKGIKVSWLRDGKVVSEGVSSTDELSDGDWYYQIHTYLEYVPR
PGENISCMVEHESLTRPHIHTWDRPLPVDQRNKLIIGIFLLVLGIVLAVAGFLYSMLRSK
ERIAKQTSQSQSISLESTVSETSSEASNQEHTTMST
NT seq
831 nt
NT seq
+upstream
nt +downstream
nt
atgcggctgtgcactccgtctcttctctgcatgctgctggttttattcacctttaaagca
gtagacggttgttatggacaattctatgcacagtgctactacactcgggatctggtcacc
atcgaattcatttactcttggtacttcaacaaggctgagtatctgagatacaacagcacg
acggatagatacacaggatacacagtttatggagcgaaaatggcagaatcactgaatcta
gaccccaaaaacagtctctatttctatgtgtacacactctgtaaacataacagtgataaa
tactccacaaacgtcctgaagagagtgaagcccgaggtcacagtgaggtcactgagatct
gagtctgacaatctcccggccatgctgatgtgcgctgcgtacgattatcacccaaaagga
atcaaagtgtcatggctgagagacggcaaggtcgtgagcgagggcgtttcctccacagat
gagctttcagatggagactggtactatcagatccacacttatctagagtacgtaccgaga
cctggagagaacatctcctgcatggtggagcacgagagcttaacacgaccacacatacac
acctgggatcgtccccttcctgtggatcagaggaacaagctgattattggcatttttctc
ctggtgctgggaatcgttttggctgttgctggatttctttattccatgctgagatctaaa
gaacgtattgcaaagcaaacctcacagtcacagtctatatctttagaaagcaccgtttca
gagacgagttcagaagcttcaaatcaagaacatactacaatgtccacataa
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