KEGG   Pangasianodon hypophthalmus (striped catfish): 113545996
Entry
113545996         CDS       T05759                                 
Name
(RefSeq) H-2 class II histocompatibility antigen, A-U alpha chain-like
  KO
K06752  MHC class II antigen
Organism
phyp  Pangasianodon hypophthalmus (striped catfish)
Pathway
phyp04145  Phagosome
phyp04514  Cell adhesion molecules
phyp04672  Intestinal immune network for IgA production
phyp05168  Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:phyp00001]
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04514 Cell adhesion molecules
    113545996
 09140 Cellular Processes
  09141 Transport and catabolism
   04145 Phagosome
    113545996
 09150 Organismal Systems
  09151 Immune system
   04672 Intestinal immune network for IgA production
    113545996
 09160 Human Diseases
  09172 Infectious disease: viral
   05168 Herpes simplex virus 1 infection
    113545996
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:phyp04147]
    113545996
Exosome [BR:phyp04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   113545996
  Exosomal proteins of epithelial cells
   113545996
  Exosomal proteins of breast milk
   113545996
SSDB
Motif
Pfam: C1-set MHC_II_alpha Ig_3 Ig_2 I-set
Other DBs
NCBI-GeneID: 113545996
NCBI-ProteinID: XP_026801480
LinkDB
Position
Unknown
AA seq 243 aa
MKLCVILLLSAILPANASSVHIFTELGGCSDSVDESEYFLNLDQNELLYEDFKSKQQISR
LPPFADPVDFPDLFNFAVTNRDGCLQDIKKVRAAVGSPPEARDPPEISVYPKRDVVPGEE
NNFICFITNFYPPHIRVNWTRNGVSVTEGVYISQFSLNSDGTFNLFSTLTSSPNEGDEYS
CTVEHQALDSPQTRTWEEPVEIPSVTPTVVFAVGIVVGILGLATGMFFVIKASCYSKITL
RFV
NT seq 732 nt   +upstreamnt  +downstreamnt
atgaagctctgtgtgattctcctgctttcagcgattctgccagcaaatgcttcctctgtg
cacatcttcactgaactgggtggctgcagtgactctgtggatgaatctgaatacttcctc
aatctggatcagaacgaattactgtatgaagatttcaagagcaagcagcaaatcagcaga
ctgcctccgtttgcggacccagttgattttcccgatttgtttaattttgcagtgactaac
agagacggatgccttcaggacatcaaaaaagtgcgagcggcggtgggcagtccacctgag
gccagagatcctccagagatcagcgtctacccaaaacgcgacgtggttcctggagaagaa
aataacttcatctgcttcataacgaacttctatcctccacacatcagagtgaactggacg
aggaacggtgtgtcggtgacagagggagtttacatcagccagttttcactaaacagcgac
ggaacattcaatttattctccacactgacgagttctccaaatgaaggagatgaatacagc
tgcacggtggagcatcaagctctggactcgcctcagactagaacatgggaggaaccagtg
gaaattccgagtgtaactccgacggtggtgtttgcagtgggaattgttgtaggaatactg
ggattagccaccggaatgttctttgtgattaaagcatcatgttacagtaagattacactg
cgatttgtataa

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