KEGG   Pangasianodon hypophthalmus (striped catfish): 113545999
Entry
113545999         CDS       T05759                                 
Name
(RefSeq) rano class II histocompatibility antigen, D-1 beta chain-like
  KO
K06752  MHC class II antigen
Organism
phyp  Pangasianodon hypophthalmus (striped catfish)
Pathway
phyp04145  Phagosome
phyp04514  Cell adhesion molecules
phyp04672  Intestinal immune network for IgA production
phyp05168  Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:phyp00001]
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04514 Cell adhesion molecules
    113545999
 09140 Cellular Processes
  09141 Transport and catabolism
   04145 Phagosome
    113545999
 09150 Organismal Systems
  09151 Immune system
   04672 Intestinal immune network for IgA production
    113545999
 09160 Human Diseases
  09172 Infectious disease: viral
   05168 Herpes simplex virus 1 infection
    113545999
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:phyp04147]
    113545999
Exosome [BR:phyp04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   113545999
  Exosomal proteins of epithelial cells
   113545999
  Exosomal proteins of breast milk
   113545999
SSDB
Motif
Pfam: C1-set MHC_II_beta C2-set_2 Ig_3 C2-set_3 Ig_2
Other DBs
NCBI-GeneID: 113545999
NCBI-ProteinID: XP_026801485
LinkDB
Position
Unknown
AA seq 250 aa
MMAKLWICLLLELCSMLDTINGYYRERRSECIYSSRDLSDMVYIDSAIFNKIRYRWFNST
VGKFQGYTRHGIYNAEYFNNDTDYMQRERAQVDDYCKHNAQIYYTAIIDKTVEPQVMVKS
VKQSHGSQPAVLMCSAYSFYPKLIKVTWMRNEKEVKGGQTSTEEMADGDWYYQIHSHLEY
MPESGEQISCVVEHASFKQPMEYKWDPSASAPDKSKIAIGASGLVLGIVLSAAGFIYYKK
KASGRILVPT
NT seq 753 nt   +upstreamnt  +downstreamnt
atgatggcaaagctgtggatctgtctcctgctggagttatgctccatgttggacacaata
aatggatattacagggagagacgatccgagtgcatttacagctccagagatttaagtgat
atggtttacatcgattctgccattttcaacaagattaggtacaggtggtttaacagtaca
gtggggaagtttcagggctacactcggcatggcatttataatgcagagtattttaacaat
gacacagactacatgcaaagagagcgagctcaggtggatgactactgtaagcacaatgca
cagatctactacacagctataattgataagacagttgagccccaggttatggtgaagtca
gtgaagcagtcacacggctcccagcctgctgtgttgatgtgcagcgcttacagcttttac
ccaaagctcattaaagtgacctggatgagaaatgagaaagaagttaagggaggtcagacg
tccactgaggagatggctgatggagactggtactatcagatccactcacatctggagtac
atgcctgaatctggagagcagatctcctgtgtggtggaacacgccagcttcaaacaaccc
atggaatataagtgggacccctcggcttctgcacctgataagagtaagattgctatcggg
gcttcagggctggtgttggggatcgtgctttcagctgctggattcatctactacaagaag
aaagcttcaggacggatcctggtcccgacataa

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