Pangasianodon hypophthalmus (striped catfish): 113546374
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Entry
113546374 CDS
T05759
Name
(RefSeq) receptor-type tyrosine-protein phosphatase F isoform X1
KO
K05695
receptor-type tyrosine-protein phosphatase F [EC:
3.1.3.48
]
Organism
phyp
Pangasianodon hypophthalmus (striped catfish)
Pathway
phyp04514
Cell adhesion molecules
phyp04520
Adherens junction
phyp04910
Insulin signaling pathway
Brite
KEGG Orthology (KO) [BR:
phyp00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
113546374
09140 Cellular Processes
09144 Cellular community - eukaryotes
04520 Adherens junction
113546374
09150 Organismal Systems
09152 Endocrine system
04910 Insulin signaling pathway
113546374
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
phyp01009
]
113546374
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
phyp04515
]
113546374
Enzymes [BR:
phyp01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.3 Phosphoric-monoester hydrolases
3.1.3.48 protein-tyrosine-phosphatase
113546374
Protein phosphatases and associated proteins [BR:
phyp01009
]
Protein tyrosine phosphatases (PTPs)
Class I PTPs (Classical)
Receptor PTPs
113546374
Cell adhesion molecules [BR:
phyp04515
]
Immunoglobulin superfamily
Type II RPTP family
113546374
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Y_phosphatase
fn3
I-set
Ig_3
Ig_DSCAM-DSCAML_C
Pur_ac_phosph_N
Ig_2
fn3_2
ig
Interfer-bind
Tc-R-P
PTP-SAK
DSPc
V-set
Y_phosphatase3
C2-set_2
PTPlike_phytase
PTP-NADK
Fn3_PTPRU
Fn3_ELFN
ICAM_N
Motif
Other DBs
NCBI-GeneID:
113546374
NCBI-ProteinID:
XP_026801978
LinkDB
All DBs
Position
Unknown
AA seq
1921 aa
AA seq
DB search
MVPHICPSVPLTPRWLSVLLLLGCTAFPSHADSLPSFIKSPEDQTGISGGVASFVCQAIG
EPKPRITWMKKGKKVSSQRFEVIEFDDGSGSVLRIQPLRTHRDEAIYECTATNSAGEINT
SAKLTVLEENQIPPGFPSIDMGPQLKVVERTRTATMLCAASGNPDPEISWFKDFLPVDIN
SSNGRIKQLRSGGSPIRGALQIENSEESDQGKYECVATNSAGTRYSAPANLYVRVRRVPP
RFSIPPSDQEVMPGGSTNLTCVAVGAPMPYVKWMTGEIELTKEEEMPVGRNVLELTNIRK
SANYTCVAMSSLGMIEATAQVTVKALPKPPTSLTVTETTATSVTLTWDSGNPEPVSYYMI
QYRSKASDSSYQEVDGVATTRYSIGGLSPYSEYEFRVMAVNNIGRGPPSDAVETRTSEQA
PSSPPLHVQARMLSSSTMLVQWEPPEEPNGQIRGYRIYYTTDPDAQLSAWLKHNTDDSRL
TTISGLITNVTYSLRVLGFTSVGDGPPSDVLQVKTQQGVPAQPSGFEAEVEPDARIVLKW
LWPVQEPITLYELHYWESGSDNKIRVTFIPAGSYAVEGLKPDTLYKFSLAARSEMGLGVF
TKPIEARTAQSTPSAPPQDVQVLSLSSTSIKVSWVPPPAASRHGAIVRYTVSYQAVNGED
TERHEVTDIGADATSVVLEGLGKWTEYVVRVRAHTDVGPGPESAPVRIRTNEDVPGAPPR
KLEVEAINSTAIRVTWKPPLSGKQHGQIRGYQVIYSRLENGEPRGHPNIMDVALPEAQWN
IEDTTEYEAIISGLISETSYSVTVAAYTTRGDGARSKAKVIKTTGAVPGKPSMLISITVG
NTALIQWQPPKDMPGELIGYRLRYKRADEESFTVHNFGSTDDHYTATGLFKGATYSFHLS
AKNRAGTGEEFVKNISTQEEVPSGFPLNLSVVGLTTTTTRLTWAPPAPAERNGRITHYVV
IYRDINSQQNSTNRTSDTHMTLHDLRPDTTYDIRIQAFTTKGGGPMSPSIQSRTMATSPA
FATSFGVKAVMKTSVLLTWELPENFKSQGLFKILYNQQSVEVQGNMKRKLITGLKPDTNY
SFVLMSRGNSAGGLQQQVSIRTAPDLLKTKPVLFKTDENNGGKITINLPKVATTAPISWY
YIVVVPGSLTSSRRWENPDEMELDELLEVGKGSPPRHRRRRRYTEIPRAYIAAKLEYLPE
TFTLGDEQNYNGFYNRPVPSNQPYQCFVMAEMKEQHLSSANEKQRVFSSSPYSDPVMVES
GSVARSVDSPEMLWVMGPVLAVVLIVSIVIAIILFKSKQERKRASPLPKDEHLSGVKDSL
LANSSDPVEMRRINYQTPGMREHPPISVCELADHIERLKANDNLRFSQEYESIDPGQQFT
WENSNMEVNKPKNRYANVIAYDHSRVVLTSVDGVPGSDYINANYIDGYRKQNAYIATQGP
LPETLSDFWRMVWEQRTSTIIMMTRLEEKSRVKCDQYWPVRGTETYGMIQVTMLDTVELA
TYSVRTFALYKNGSSEKREVRQFQFMAWPDHGVPEYPTPILAFLRRVKACNPPDAGPMVV
HCSAGVGRTGCLIVIDAMLERMKHEKTVDIYGHVTCMRSQRNYMVQTEDQYIFIHEALLE
AATCGVTEVPARNLYTHIQKLSQPPPGETVSAMELEFKRLANSKAHTSRFISANLPCNKF
KNRLVNIMPFESTRVCLQPIRGVEGSDYINASCIDGYRQQKAYIATQGPLAETTEDFWRM
LWEHNSTIVVMLTKLREMGREKCHQYWPAERSARYQYFVVDPMAEYNMPQYILREFKVTD
ARDGQSRTIRQFQFTDWPEQGVPKTGEGFIDFIGQVHKTKEQFGQDGPITVHCSAGVGRT
GVFITLSIVLERMRYEGVVDLFQTVKTLRTQRPAMVQTEDQYQLCYRAALEYLGSFDHYA
T
NT seq
5766 nt
NT seq
+upstream
nt +downstream
nt
atggtgcctcatatttgcccctcagtgcccttgacgcctcgctggctttctgtcctgctt
ctgctcggctgcacggcctttccctcccacgccgacagtttgccgagtttcatcaagtcg
ccggaggaccagacggggatttcgggtggcgtggcgtctttcgtgtgccaggcgatcggc
gaacccaaacctcgtatcacgtggatgaaaaaggggaagaaagtcagctctcagcgcttc
gaggtgatcgagtttgatgatggctcgggctccgtcctgcgtatccagcccctgcgcacg
caccgagacgaggccatttacgagtgtacggccaccaacagcgccggagaaatcaacacc
agcgccaagctcaccgtgctggaagagaatcagattcctcccggtttcccgagcatcgat
atgggtcctcagctcaaagtggtggagcgaacacggaccgctaccatgctctgtgccgct
agcgggaaccccgatccggaaatttcctggtttaaggacttccttcccgtcgacatcaac
agcagcaacggacggataaagcagcttcgctcaggcggctcaccgattcgaggagctctg
cagattgagaacagtgaagagtcggaccagggaaaatacgagtgtgtggcgacgaacagc
gccgggacgcgttactccgcccccgccaacctctacgtccgagtacggcgggtgccgcct
cgtttctccatcccgcccagtgatcaggaggtgatgccagggggcagcactaatctcacc
tgcgttgccgtcggagccccgatgccctacgtcaagtggatgactggagaaatagagctc
accaaagaagaggagatgcccgtagggcgcaacgttctggagcttaccaacatccgcaag
tcggctaactacacctgcgtggccatgtcttctctgggaatgatcgaagccacggcacaa
gttacagtcaaagctctccccaaaccgcctacgtctctgactgtaactgaaacgacggcc
accagcgtcaccctgacgtgggattccgggaatccggaacccgtctcctactacatgatc
caatatcgctccaaagcctccgacagcagctaccaggaagtggacggcgttgccacgacg
cgctacagcatcggagggttgagcccgtactcggagtacgagttccgcgtcatggcggtg
aacaacatcggccgcggtccaccgagcgacgccgtagagactcgcaccagcgaacaggcg
ccttcgtctcctccgctgcacgtgcaggcacgcatgctgagctctagcaccatgctggtg
cagtgggaacctccggaggaacccaacgggcagatccgcggatatcgtatctattacact
acggatccggatgcgcagctcagcgcctggctgaagcacaacaccgacgacagccgactg
accacaatctctggattaatcactaatgtcacgtacagtctccgcgtcctgggcttcact
tctgtaggagacggacctccatctgacgtcctgcaggtcaaaactcaacaaggagtcccg
gcacagccttctggatttgaggccgaagtcgaacccgacgccaggattgtgcttaagtgg
ctttggcctgttcaagagccgatcactttgtacgagctgcattactgggagtctggatca
gacaataagattcgtgtcaccttcatcccggctgggtcgtacgccgtggaaggcctgaag
ccagacactctgtataagttctccctcgctgcgcgctccgaaatgggcctgggggtcttc
accaagcccatcgaagccaggaccgctcagtccacaccttcagctccacctcaggacgtt
caggttctcagtctgagctccaccagcattaaggtgagttgggtcccgcctcctgctgcc
agcaggcacggcgctatcgttcgctacaccgtgagctaccaggcggtgaacggcgaagac
acagagcggcacgaagtgacagatattggagcggacgccaccagcgttgtactagagggg
ttggggaagtggacggagtatgtggtgcgtgtgagggctcacactgacgtggggcccggg
cctgagagtgctccggtacgcatccgaaccaacgaggatgtgcctggagctcctcctcgt
aagttggaggttgaagctataaactcgacggctatccgtgtgacgtggaagccgccgctc
tcgggaaaacagcacggtcagatccgaggatatcaggtgatttactctcggctggagaac
ggagaaccacgagggcatccgaacatcatggacgtagcgctgcctgaagcccagtggaac
attgaggacaccaccgaatatgaagccatcatctctggcctgatctcggagacgtcgtac
tcggttacggtagcggcgtacaccaccagaggagacggagcgcggagcaaagccaaggtc
atcaaaaccacaggagcagttcctggcaagcccagcatgctcattagcatcacagtgggc
aacaccgccctcatccagtggcagcctccgaaggacatgccgggcgagctgattggctat
cgtctacgctacaagcgtgcggatgaggaatcgttcacagtgcataacttcgggagcacg
gatgaccactacacggcgacgggtctcttcaagggcgccacctacagcttccacttgagc
gccaagaaccgtgcaggcaccggagaagagtttgtcaagaacatcagcacgcaggaggaa
gttcccagcggattcccgctgaatctgagcgtggtgggactgaccaccacaaccacccgg
cttacatgggcgccaccggccccggcggagcggaacggacggatcactcactacgtcgtc
atttacagagatatcaacagccagcagaacagcaccaatcgtacgtcggacacacacatg
acgctgcatgacctccgacctgacaccacctacgacatccgcatccaggctttcaccacc
aaggggggcggacccatgagccccagcatccagagcaggaccatggccacgtcgccagct
ttcgcaacgagttttggtgtcaaagccgtaatgaagacatctgtccttctgacctgggag
cttccagagaacttcaagtctcaagggctttttaagattttgtacaatcagcagagcgtg
gaggttcagggcaacatgaagaggaagctgatcacaggcctgaagcccgacactaattac
tcgttcgtgttaatgagtcgagggaacagcgccggcggactgcagcagcaggtctccatc
cgaactgcgccggatctcctcaaaaccaaacccgtcctcttcaaaaccgacgagaacaac
ggaggaaaaatcaccatcaaccttcccaaagtggcgactacagcaccgatcagttggtat
tacatcgtggtcgtgccgggatcgctgacatcatcacgcaggtgggaaaatccggatgaa
atggagcttgatgagcttctcgaggtcggcaaaggttctccgccgaggcaccggcgtcgt
cggcggtacactgaaattccgagagcgtacatcgccgccaagctggaataccttcccgag
acgttcacgctcggagatgagcaaaactacaacggcttctacaaccgcccggtgcctagc
aaccagccgtaccagtgcttcgtcatggccgagatgaaggagcagcacctttccagcgcc
aacgagaagcagcgcgttttctcctccagcccgtactcggacccggtgatggtggagagc
ggcagcgtggctcgcagcgtggattctcctgagatgttgtgggtgatggggccggtcctc
gccgtggtgctcatcgtcagcatcgtcatcgccatcatcctcttcaaaagcaagcaggag
aggaagcgagcgtctccgttgcctaaagacgaacacttgagcggggtgaaggactccctc
ctggctaactcgtccgatcccgtggaaatgaggagaatcaactatcagacgccaggaatg
agagaacatcctcccatctctgtgtgtgagctggcagaccacatcgagcgcctcaaagcc
aacgacaacctgcgcttctcgcaggagtacgagtccattgatcccggccagcagttcacc
tgggagaactccaacatggaggtgaacaaaccgaaaaaccgctacgctaacgtcatcgcc
tacgatcactccagagtcgtgctgacctccgtggacggcgttccaggcagcgactacatc
aacgcgaactacatcgacggctaccgcaagcagaacgcctacatcgccacgcagggccct
ctgcccgagacgctcagcgatttctggaggatggtgtgggagcagaggaccagcaccatc
atcatgatgaccagactggaggagaagtcacgggtgaagtgcgaccagtactggccggtt
cgtggaacggaaacgtacggaatgatccaggtgaccatgttggatacggtggagctggcg
acgtacagcgtgcgcacatttgcactttataagaatggctccagtgagaagagagaggtg
agacagttccagttcatggcgtggccggatcacggcgtgcccgagtaccccacgcccatc
ctggccttcctgcgcagggttaaagcgtgtaaccctcctgacgccgggcccatggtggtg
cactgcagtgccggcgtgggtcgcaccggctgcctcatcgtaatcgacgccatgctggag
cgcatgaagcacgagaagacggtggacatttacggccacgtgacgtgcatgcgctctcag
aggaactacatggtgcagacggaggatcagtacatcttcatccacgaggcgctgctcgag
gcggcaacctgcggcgtcaccgaggttccggcacgaaacctctacacacacatccaaaaa
ctgagccagccgccgcccggggagaccgtcagcgccatggagctcgagtttaagaggctg
gccaactccaaagctcacacgtcacgtttcatcagcgccaacctgccgtgcaacaagttc
aagaaccgactggtgaacatcatgccgttcgagtcgacgcgtgtgtgtctgcagccaatc
agaggggtggaggggtccgactacatcaacgccagctgcatcgacggttacagacagcag
aaagcgtacatcgccactcagggtcctctggccgagaccacggaggatttctggaggatg
ctgtgggagcacaactccaccatcgtggtgatgctgaccaaactccgcgagatgggacgg
gagaagtgtcatcagtactggccggccgagcgctccgcccgttatcagtacttcgtggtc
gaccccatggccgagtacaacatgcctcagtacatcctacgcgagtttaaagtcaccgac
gccagggacggccaatcgcggacgatccgccagttccagttcaccgattggccggagcag
ggcgtgccgaagacgggcgagggattcatcgatttcattggccaagtgcataaaaccaag
gagcagttcggccaggacggaccaatcactgtgcactgcagtgcgggagtgggcaggacc
ggagtgttcatcactctcagcatcgttctggagaggatgagatatgaaggagtggtggat
ttgttccagacggttaaaactctgcgcactcagagacctgccatggtgcagactgaggac
cagtaccagctgtgttaccgagcagctctggagtatctggggagtttcgaccactatgca
acgtaa
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integrated database retrieval system
