Pangasianodon hypophthalmus (striped catfish): 113547213
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Entry
113547213 CDS
T05759
Name
(RefSeq) sharpin
KO
K20894
shank-associated RH domain-interacting protein
Organism
phyp
Pangasianodon hypophthalmus (striped catfish)
Pathway
phyp04217
Necroptosis
phyp04621
NOD-like receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
phyp00001
]
09140 Cellular Processes
09143 Cell growth and death
04217 Necroptosis
113547213
09150 Organismal Systems
09151 Immune system
04621 NOD-like receptor signaling pathway
113547213
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
phyp04121
]
113547213
Ubiquitin system [BR:
phyp04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
LUBAC complex
113547213
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sharpin_PH
Zn_ribbon_RanBP
PH
ubiquitin
Ubiquitin_2
Motif
Other DBs
NCBI-GeneID:
113547213
NCBI-ProteinID:
XP_026803259
LinkDB
All DBs
Position
Unknown
AA seq
427 aa
AA seq
DB search
MALSSGVWDPVFPSPALQQGSGSGSGCGTVLMSVRVSVSRATLRALRPLRSPGAVEDDAA
LRLQLSMDPNRPGDFRLTLRDSGSNGRIMSLAEFELRAVRYEIKSPRCHELCVIKPPHDT
LTFTFRSEQEAQEWATVMISSLREAHRVAGIATHPTDDSVHYLKPIEQSAALSLSAKEEL
CAELARAIEAGDTQAAVQHATSLAHQQMALTIQPARKDSEDGEISLAVAVEDATSSCCVT
VKVIPHMTVASLKQQMFAEYGFHPRVQRWVIGQCLCSEQRTLVSYGVCRDGDTAFLYLLS
ARHARLSRLQCQQDQESALLAPAPKPAPTPAPASHDWRGYSTLPPRLHHSNPGSSGGGAG
KHSINDINLERLQLGGPGVRPTNTQLGWSCPSCTFINKSTRPGCEICSTERPTRPELSAS
EEAALLL
NT seq
1284 nt
NT seq
+upstream
nt +downstream
nt
atggctctgagttcgggggtttgggatccggtttttccgtctccggcgctccagcagggc
tcgggctcgggctcgggctgcggcacggtgctgatgtcggtgcgcgtgtcggtgtcgcgg
gcgacgctgcgagctctgcggccgctccgctctcccggtgccgtcgaggatgacgcggct
ctccgcctgcagctcagcatggacccgaaccggcccggagacttccgcctcaccctcaga
gactccggcagtaacggcaggatcatgtctctggcagagtttgagctgcgtgcagtgagg
tacgagatcaagtcgcctcgctgccacgagctgtgtgtcatcaagccgccgcacgacacg
ctgaccttcaccttccgcagcgagcaggaggcccaggagtgggccactgtcatgatatca
tcactgagggaagcccacagagtcgcaggcatcgccactcatcccactgatgactcggta
cactatctgaaacctatcgagcagagcgcagccttgtcattatcagctaaagaggagctg
tgtgctgagctggccagagccatcgaggccggagacactcaggcggcagtgcagcacgct
acgtcactggcgcaccagcagatggctctcaccatccagccagctcgaaaggactctgaa
gacggcgagatcagcttagcagttgcagttgaagatgccacgtcatcctgttgcgtcaca
gtaaaagtcatcccacacatgactgtggcgtctctcaagcagcagatgtttgcggaatac
ggtttccacccgcgagtgcagcgctgggtcataggtcagtgtttgtgctctgagcagcgc
acactggtgtcgtacggcgtgtgtcgagatggagacacagcgtttctctacctcctctca
gctcgccacgcccgcctcagccgactgcagtgccagcaggaccaggagagcgccctcctc
gcacccgcgcccaaaccggcaccgaccccggcaccagctagtcacgactggagaggatac
agcacgctgccaccccgactccatcactccaacccaggaagcagtgggggcggagctggg
aagcacagcatcaatgacatcaacctggagagattgcagctgggtggacccggggtgaga
ccaacaaacacacagctgggttggtcgtgtccttcatgtactttcataaataagtcgacg
aggcccggctgtgaaatctgcagtacagaaagacccactcggccggagctcagcgcatct
gaggaggcggctcttctcctataa
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