Paenibacillus ihbetae: BBD41_17030 Help Entry BBD41_17030       CDS       T05154                                  Name (GenBank) DNA ligase (NAD(+)) LigA   KO K01972   DNA ligase (NAD+) [EC:6.5.1.2] Organism pib  Paenibacillus ihbetae Pathway pib03030   DNA replication pib03410   Base excision repair pib03420   Nucleotide excision repair pib03430   Mismatch repair Brite KEGG Orthology (KO) [BR:pib00001]  09120 Genetic Information Processing   09124 Replication and repair    03030 DNA replication     BBD41_17030    03410 Base excision repair     BBD41_17030    03420 Nucleotide excision repair     BBD41_17030    03430 Mismatch repair     BBD41_17030  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03032 DNA replication proteins [BR:pib03032]     BBD41_17030    03400 DNA repair and recombination proteins [BR:pib03400]     BBD41_17030 Enzymes [BR:pib01000]  6. Ligases   6.5  Forming phosphoric-ester bonds    6.5.1  Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)     6.5.1.2  DNA ligase (NAD+)      BBD41_17030 DNA replication proteins [BR:pib03032]  Prokaryotic type   DNA Replication Elongation Factors    Elongation factors (bacterial)     Other elongation factors      BBD41_17030 DNA repair and recombination proteins [BR:pib03400]  Prokaryotic type   SSBR (single strand breaks repair)    BER (base exicision repair)     DNA ligase      BBD41_17030    NER (nucleotide excision repair)     GGR (global genome repair) factors      BBD41_17030    MMR (mismatch excision repair)     DNA ligase      BBD41_17030   DSBR (double strand breaks repair)    NHEJ (non-homologous end-joining)     SHDIR (short-homology-dependent illegitimate recombination)      RecET pathway       BBD41_17030 BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  DNA_ligase_aden DNA_ligase_OB HHH_2 BRCT HHH_5 HHH Nlig-Ia PTCB-BRCT DNA_ligase_ZBD DUF1492 DUF5347 Motif Other DBs NCBI-ProteinID:  ANY74149 UniProt:  A0A1B2E2I7 LinkDB All DBs Position 3900195..3902210 Genome browser AA seq 671 aa AA seqDB search MEFKEQMEKLIAELNRYNYHYYTLDQPLVSDKEYDALYDQLVALERETGVTLPDSPTQRV GGEILKGFTPHRHLAPLWSLDKAQNIEQLRTWHDRVVRLVNDYNTKNPGSPLPTPCYALE LKFDGLTLNLTYQNGKLIQASTRGNGVVGEGILSQVKTIKSVPLTIPFTEGTIEVQGEGI MNLSVLEEYNKTAVEPLKNARNAAAGALRNLNPKVTAERKLNAYFYNIGYSEGVAFKDHK EMMDFLRENRFKVNPYIFYFEQFDDVMEQLADIEKRRSELDYLIDGAVVKVTDFRTREAL GYTDKFPRWAVAYKFEAEETTTVLQSVSWNVGRTGKITPLARVEPVELAGVTVQNCTLNN IGDIERKNLKFALGTRVFIRRSNDVIPEILGKVTEENDGEEIVYPEACPSCGFPLEQRGA HLFCNNKTGCKPQIVARITHFASRDAMDIETFSDKTAIQLYEELGVREPAELYTLSFDSL VKLERFGEKKAQNLLDAIEKSKERDLAAFLFALGIPNTGKSTTKMLADHYRDLHRVMEAT AEELVELPDVGGIVAESIAGYFADPFNRASIEKMLSLGVQAKAPEAPKPVSTDSFFSGKT VVLTGTLHLLTREEATERLEALGAKVAGSVSKKTDLLIAGEKAGSKLAKAQQLGIDILDN EEEFVRLLNEA NT seq 2016 nt NT seq  +upstreamnt  +downstreamnt atggagttcaaggaacagatggagaagctcatcgcggagctaaaccgatacaattaccat tactacacgctggatcagccgctcgtgagcgacaaggaatatgatgccttatatgatcag ctggtagcattggagagagagaccggggtcacgcttccggattcccctacccagcgggtg ggcggggagattttgaagggatttacgccgcatcgccatttggcgccgctctggagcttg gacaaagcccagaacattgagcagcttcgtacctggcacgaccgggtcgtccggctggtc aatgactacaatacgaagaatcccggcagcccgctgccgaccccttgctacgcgcttgag ctgaagttcgatgggcttacgctgaatttgacgtatcagaacggcaagctcatccaagcc tcgacgcgggggaacggcgtggtgggcgagggcatcctctcccaggtgaagacaatcaaa tcggttccgctcacgattccattcacggaaggaacgatcgaagtgcagggcgagggcatc atgaacctgtcggtgctggaggaatacaacaagacggcggttgagccacttaagaatgcc cgcaacgccgcggctggcgcactgcgcaacctgaatccgaaggtaacggccgagcgcaag ctgaacgcttatttttacaacattggttattcggaaggcgtcgcgtttaaggaccacaag gaaatgatggatttcctgcgggagaaccggttcaaggtgaatccgtatattttctatttt gagcagttcgatgacgtgatggagcagctggccgacatcgagaaacgccgctccgagctg gattacctgatcgacggggccgtcgtgaaggtgaccgatttccgcactcgcgaggcgctc gggtataccgataaattcccgcgttgggcggttgcttacaaattcgaagcggaagagaca acaacggtgctgcagtcggtatcctggaacgtgggccgcacgggaaaaatcaccccgctt gcgcgcgtcgagccggtcgagctggcaggcgttacggtacagaactgcacgttgaacaat atcggggatattgagcgcaaaaacctcaagttcgccctcggtacccgcgtctttatccgc cgttcgaacgacgtcatcccggaaatcctcggcaaggtaacggaagagaatgacggcgag gagattgtgtatccggaggcgtgtccgtcctgcggattcccgttggagcagcgcggcgct cacctgttctgcaacaacaagacggggtgcaagccgcaaatcgtggcgcggattacgcat tttgcgtcgcgggatgcgatggatatcgagacgttcagcgataagacggcgatccagctg tacgaagagctgggcgtgcgggagccggccgagctgtacacgctgtccttcgacagcttg gttaagctggagcggttcggggagaagaaggcgcaaaacctgctagatgcgatcgagaag agcaaggagcgggatctcgctgcgtttctgttcgcgcttggcatcccgaataccggcaaa tccacgaccaaaatgcttgcggaccattaccgggatcttcaccgcgtgatggaggcgacc gccgaggaactggtggagctgccggacgttggcggcatcgtggccgagagcattgccgga tatttcgcggatccgttcaaccgggcgagcatcgagaagatgctgtcgctcggcgtgcag gcgaaggcaccggaggcgccgaagccggtgagcaccgactcgttcttcagcggcaagacg gtcgtactgacaggcacgctgcacctgctcacccgtgaggaggccaccgagcgcctggag gcgctgggagccaaagtggcgggcagcgtctccaagaagacggacctgctgatcgccggc gagaaggccggaagcaagctggccaaggcgcagcagctcgggattgatattttggataat gaagaagagttcgtgcggcttttgaatgaggcctga

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