Scheffersomyces stipitis: PICST_32971
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Entry
PICST_32971 CDS
T01023
Name
(RefSeq) predicted protein
KO
K11086
small nuclear ribonucleoprotein B and B'
Organism
pic
Scheffersomyces stipitis
Pathway
pic03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
pic00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
PICST_32971
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pic03019
]
PICST_32971
03041 Spliceosome [BR:
pic03041
]
PICST_32971
03032 DNA replication proteins [BR:
pic03032
]
PICST_32971
Messenger RNA biogenesis [BR:
pic03019
]
Eukaryotic type
mRNA processing factors
3' end processing
U7-dependent histone pre-mRNA processing factors
PICST_32971
Spliceosome [BR:
pic03041
]
Complex A
U1 snRNP components
Sm proteins
PICST_32971
U2 snRNP components
PICST_32971
Complex B
U1 snRNP components
PICST_32971
U4/U6.U5 tri-snRNP components
PICST_32971
Complex C
U2 snRNP components
PICST_32971
DNA replication proteins [BR:
pic03032
]
Eukaryotic type
DNA Replication Termination Factors
Telomerase complex (fungi)
Sm core complex
PICST_32971
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LSM
Motif
Other DBs
NCBI-GeneID:
4840181
NCBI-ProteinID:
XP_001385906
JGI:
32971
UniProt:
A3LXX4
LinkDB
All DBs
Position
6:complement(<1111897..>1112469)
Genome browser
AA seq
142 aa
AA seq
DB search
MSSLPITKTTKMSDLIHYRLKISTIDNRFFIGSLLAFDKHLNLVLSDTEETRITKKSIVS
MKKSAGSDGKHDPTFDKRSLGLIILRGEQIVSLSIESPPPLDPKKRLGLERGKGISKPLK
TPVSVKARVPAIRKPQGGFRRQ
NT seq
429 nt
NT seq
+upstream
nt +downstream
nt
atgtcgtcattgcccattaccaaaacgaccaagatgtcggatttgatacattatcgtctc
aaaatatcgacgatagacaaccgcttttttataggatcacttttagcttttgataaacac
ttgaatttggtactttcagatactgaagaaacaagaatcactaagaagtctattgtttcg
atgaagaaaagtgctggctcggacggcaaacacgatcctacatttgataagagatctttg
ggtttgataatcttgcgaggtgagcagattgtctcattgagcatagagagccctccacca
ttggatccaaagaaaagattgggcttagaaagaggtaagggtatctccaaaccattaaag
actccagttagtgtcaaagcacgagtgccagctataaggaaacctcagggaggcttcaga
cgtcagtaa
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