Scheffersomyces stipitis: PICST_49179
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Entry
PICST_49179 CDS
T01023
Symbol
RAD16
Name
(RefSeq) nucleotide excision repair protein
KO
K15083
DNA repair protein RAD16
Organism
pic
Scheffersomyces stipitis
Brite
KEGG Orthology (KO) [BR:
pic00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pic03400
]
PICST_49179 (RAD16)
DNA repair and recombination proteins [BR:
pic03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
NER4 complex
PICST_49179 (RAD16)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
zf-C3HC4
ResIII
DEAD
zf-C3HC4_2
zf-C3HC4_4
zf-RING_UBOX
zf-rbx1
zf-C3HC4_3
zf-Nse
zf-RING_2
zf-RING_6
Prok-RING_4
Zn_Tnp_IS91
Motif
Other DBs
NCBI-GeneID:
4840079
NCBI-ProteinID:
XP_001385416
JGI:
49179
UniProt:
A3LX20
LinkDB
All DBs
Position
6:350961..353066
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AA seq
701 aa
AA seq
DB search
MAIELSEDDLDLEDDLPLSSRGANKKGKVTKKKPRKKKEPKVKVPYFTRITNRLYEFHPH
LKDVFPYLASLERIPVERSPQPPSMNIKLLPFQLEGLNWLKKQEDGEFQGGILADEMGMG
KTIQTIGLFTSDLTKRPNLVVGPTVALMQWKNEIEKHTEPGLLKVLLYHGANRTTDVKEL
SKYDVILTSYSVLESVYRKENHGFKRKSGLVKEKSALHAVEFYRVILDEAHNIKDRTSGT
AKAANNLRCKKRWCLSGTPLQNRIGEMYSLIRFMKMEPFHQYFCTKCDCKSDEWKFSDWR
HCDQCGHAPMVHTNFFNHFMLKNIQKFGIEGDGLVSFQNIRLLLQNVMLRRTKIERADDL
GLPPRIVEIRRDRFNEEEKDLYTSLYSDSKRKFNDYVAEGVVLNNYANIFTLITRMRQLA
DHPDLVLKRVGTNQISSEIEGVIMCQLCDDEAEEPIESKCHHRFCRMCISEYVESFMGEE
KNLQCPVCHIGLSIDLEQTALEVDEELFSKASIVNRIKMGSHGGEWRSSTKIEALVEELY
KLRSDKHTIKSIVFSQFTSMLDLIEWRLKRAGFQTVKLQGSMSPQQRDNTIKYFMDNTEV
EVFLVSLKAGGVALNLCEASQVFLMDPWWNPSVEWQSMDRVHRIGQKRPIRITRFCIEDS
IEMKIIELQEKKANMIHATINHDDGAVNRLTPDDLQFLFMN
NT seq
2106 nt
NT seq
+upstream
nt +downstream
nt
atggcaatcgaattgtcagaagacgatcttgatttggaagacgacttacctttatcaagt
agaggtgcaaacaagaaaggtaaagtaaccaagaaaaagccgaggaagaagaaggagccc
aaagttaaagttccatatttcacgcgtatcaccaaccgtttgtacgagtttcaccctcac
ttgaaagatgtattcccctatttggcgtctttggaacggattccagtagaacgctctcca
caacctccttcaatgaatatcaaactcttgccgttccagcttgaaggtttgaactggttg
aagaaacaagaagatggtgagtttcaaggtggaatattggccgatgaaatgggtatgggt
aaaaccatccagacaatcgggttattcaccagtgacttgactaagcggcccaatttggta
gttggtccaactgttgcgttgatgcaatggaaaaatgaaatcgaaaaacatacagaaccg
ggattgttgaaagtgttgttgtaccatggagccaacagaactactgatgtcaaagagtta
agtaaatatgacgtcatattgacatcgtactccgttcttgaatctgtatatcgtaaagaa
aaccatggatttaagagaaaaagcggattggtaaaggaaaagtcagcactacatgcagtg
gaattctacagagtgattttggatgaagctcacaacatcaaggacagaacatctggaaca
gctaaagcagcgaataacttaagatgtaagaagagatggtgtttgtcaggaacaccatta
caaaacagaattggtgaaatgtactccttaattcgattcatgaaaatggagccttttcac
caatacttctgtaccaagtgtgattgtaagagtgacgaatggaagttttctgattggaga
cactgtgaccaatgtgggcatgcaccaatggttcacaccaatttctttaaccatttcatg
ttgaagaatattcaaaaatttggtattgagggtgacggtctagtaagttttcagaatatt
aggctacttttgcaaaatgtaatgttaagaagaaccaaaattgaaagagctgatgacttg
ggactaccaccaagaatagtagagatcagaagggacaggtttaacgaagaagaaaaggat
ttgtatacatcgctatacagtgattccaagagaaagtttaacgattatgtcgctgaaggt
gtcgtgttgaataactatgccaatatctttactttgataacaagaatgagacagcttgct
gatcatccggatttggtattaaaaagagttggcacgaatcaaatttccagtgaaatcgaa
ggagtgataatgtgtcagctttgtgacgatgaagctgaagagccgattgaatctaagtgt
caccatagattttgcaggatgtgtattctggaatacgtagagtcatttatgggcgaagag
aagaatttacagtgtccggtttgccatattggattatctattgatttggagcagactgcc
cttgaagttgacgaagagttgttttcaaaggcttctatcgtcaatagaatcaagatgggt
tcgcatggaggtgaatggagatcttctacaaagatcgaagctttagtagaagaactctac
aagttaagatcagacaaacatacgatcaaatccattgtcttctcacaatttacttcgatg
ttggacttgatcgaatggagactaaagagagctgggttccagacagtgaaattacaagga
tcgatgtctccacaacagcgtgacaatactatcaagtatttcatggataatactgaagta
gaagtattcttggtttctttgaaagccggtggtgtcgcccttaatttgtgtgaagcctct
caagtatttttgatggacccctggtggaatccaagtgttgaatggcagtccatggatagg
gtgcatagaattggccaaaagagacctattcgaattaccagattttgtattgaggacagt
atagagatgaagattattgagttacaggaaaagaaagccaatatgattcatgctactata
aaccacgacgacggtgcggtgaatcgtttgactcccgatgacttgcagttcttgtttatg
aactaa
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