Phytophthora infestans: PITG_08314
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Entry
PITG_08314 CDS
T01333
Name
(RefSeq) ATP-binding Cassette (ABC) Superfamily
KO
K12608
CCR4-NOT complex subunit CAF16
Organism
pif
Phytophthora infestans
Pathway
pif03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
pif00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
PITG_08314
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pif03019
]
PITG_08314
Messenger RNA biogenesis [BR:
pif03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
PITG_08314
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ABC_tran
AAA_21
SMC_N
ATP-synt_ab
SRP54
AAA_29
Zeta_toxin
NPHP3_N
AAA_30
AAA_16
AAA_28
AAA_22
RsgA_GTPase
AAA_23
nSTAND3
AAA_15
VapE-like_dom
Motif
Other DBs
NCBI-GeneID:
9475014
NCBI-ProteinID:
XP_002903711
UniProt:
D0NAA8
LinkDB
All DBs
AA seq
319 aa
AA seq
DB search
MSTANKEASPFVELRRLNFAFAKVTIGGQLINRLQHDPATADAMEDDDRVLRDVNLTLQS
GQRLLVVGGNGAGKSTLLSILAGKHLTADDTALIFGRDSFRDTTLNALRTFVSADWGQRS
VAFATHAMAYSADMAVEEMMTKLQSEHPERRQKLLKVLRIDPKWRLHRLSDGQRRRVQLF
LALLRPSQLIVLDEVLGMLDIISRENVLAFLKEETETRQATVLLATHIFDGTDVWASHVL
YIRRGTVGFYGPIQQCTDGGKIPMYKVVEHWLREELADDDRVECEAVGPSGEFDLGNAQN
RAGGYADGRLGGVDVTTSF
NT seq
960 nt
NT seq
+upstream
nt +downstream
nt
atgagcaccgccaataaagaagcatctccctttgtggagcttcgccgtcttaactttgcg
ttcgccaaagttactatcggtggccaactcatcaatcgcttgcagcatgaccccgctact
gctgacgccatggaagacgacgatcgagtcctgcgtgacgtgaatctaacgctgcagtct
ggtcagcgcctgttggtcgtgggtggtaatggagctggcaaaagcacgctactcagtatc
ttggctggcaagcacctgacggctgacgacacggcgctgatcttcggtcgagacagcttc
cgtgacacgacactcaacgctttaaggactttcgttagtgccgactgggggcagcgctcg
gtggcgttcgcaacgcacgcaatggcttactcggctgacatggcggtggaagaaatgatg
acgaaactgcagagtgaacacccggagcgacgccaaaagttactgaaggtgttgcgtatt
gacccaaagtggcgtttacatcgcctgtcggacggtcaacgtcgccgcgttcagctcttt
ctggcgctactgagaccttcgcagctcatcgtactggacgaagtgctgggaatgctcgac
atcatctcgcgcgaaaacgtactggcattcctaaaggaggaaacagagactcgacaagcc
acggtgttgctagccacgcacatcttcgatgggacggacgtctgggcatctcatgtgctg
tatattcgtcgcggtactgttgggttctatggtccgattcagcagtgtactgatggaggg
aagatcccgatgtataaggtggtggaacactggctacgtgaggaattggccgacgacgac
cgtgtggaatgcgaggcggtgggcccaagtggtgagttcgacctgggcaacgcgcagaac
cgcgcaggagggtatgccgacggtcgactgggtggtgtcgatgtcaccacatcgttttaa
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