Pseudomonas imrae: OQ460_06020
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Entry
OQ460_06020 CDS
T11325
Symbol
nth
Name
(GenBank) endonuclease III
KO
K10773
endonuclease III [EC:3.2.2.-
4.2.99.18
]
Organism
pim Pseudomonas imrae
Pathway
pim03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
pim00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
OQ460_06020 (nth)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pim03400
]
OQ460_06020 (nth)
Enzymes [BR:
pim01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
OQ460_06020 (nth)
DNA repair and recombination proteins [BR:
pim03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
OQ460_06020 (nth)
Prokaryotic type
OQ460_06020 (nth)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HhH-GPD
HHH
EndIII_4Fe-2S
RecR_HhH
Ogg-HhH
HHH_5
Motif
Other DBs
NCBI-ProteinID:
XLY94435
LinkDB
All DBs
Position
complement(1160385..1161023)
Genome browser
AA seq
212 aa
AA seq
DB search
MNAAKRLEIFRRFHEDNPEPKTELAYSSPFELLIAVILSAQSTDVGVNKATAKLFPVANT
PAAIHALGVEGLSHYIKTIGLYNSKAKNVIETCRLLVELHNGEVPQTREALEALPGVGRK
TANVVLNTAFRQLTMAVDTHIFRVSNRTGLAPGKNVVEVERQLMKFVPKPYLLDSHHWLI
LHGRYVCQARKPRCGSCRIEDLCEYKEKTSDD
NT seq
639 nt
NT seq
+upstream
nt +downstream
nt
atgaatgccgcaaaacgcctggaaattttccgtcggtttcacgaagacaatccggaaccg
aaaaccgaactggcttattcctcaccgtttgagctgctgattgccgtgattttgtccgcg
cagtcaacagatgttggcgtcaataaggccaccgccaagttgtttcccgtggccaatacc
ccggcagcgatccatgcgctgggggtcgaagggttgtcgcactacatcaagaccatcggc
ctatacaacagcaaggcgaaaaacgtcatcgagacctgccgcttgctggtagaacttcat
aacggcgaggtcccacagactcgggaggcacttgaagcccttcctggtgtaggacgcaag
actgccaacgtagtgctcaatacggcgtttcgccagttgaccatggcggtggacactcac
atcttccgcgtcagcaaccgcaccgggctcgcaccagggaagaatgtggtggaggtggaa
agacagctaatgaagtttgtgcccaagccctatcttctcgattcacaccattggttgatc
ctgcacgggcgttacgtttgccaggcccgcaagccccgttgcggcagttgccgtatcgaa
gacctgtgcgaatacaaggaaaagacgtccgacgattga
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