Pseudomonas imrae: OQ460_18975
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Entry
OQ460_18975 CDS
T11325
Name
(GenBank) efflux RND transporter permease subunit
KO
K18138
multidrug efflux pump
Organism
pim Pseudomonas imrae
Pathway
pim01501
beta-Lactam resistance
pim01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
pim00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
OQ460_18975
01503 Cationic antimicrobial peptide (CAMP) resistance
OQ460_18975
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pim02000
]
OQ460_18975
01504 Antimicrobial resistance genes [BR:
pim01504
]
OQ460_18975
Transporters [BR:
pim02000
]
Other transporters
Electrochemical potential-driven transporters [TC:
2
]
OQ460_18975
Antimicrobial resistance genes [BR:
pim01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
OQ460_18975
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Other DBs
NCBI-ProteinID:
XLY92217
LinkDB
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Position
4002675..4005842
Genome browser
AA seq
1055 aa
AA seq
DB search
MSKFFIDRPIFAWVIALVIMLVGALSILKLPINQYPAIAPTAIDIQVTYPGASAQTVQDT
VVQVIEQQLNGIDNLRYVSSDSNSDGSMTITATFNQGTNPDIAQVQVQNKLNLATPLLPQ
EVQQQGIRVTKSVKNFLMVIGLVSEDGSMTKDDLSNYIVSNIQDPISRTSGVGDFQVFGS
QYAMRIWLDPAKLNNFQMTPVDVSNAVQAQNVQVATGQLGGLPALPGTQLNATIIGKTRL
QTAEQFENILLRVNADGSQVRLGDVARVELGGQNYSISAQFNGKPASGMAIKLASGANAL
DTAKAIRETVASLEPFFPPGMKAVVPYDTTPVVTESISGVVDTLVEAIVLVFLVMYLFLQ
NFRATIITTMTVPVVLLGTFGILAAFGFTINTLTMFGMILAIGLLVDDAIVVVENVERVM
AEEHLSPKEATVKSMEQIQGALVGIALVLSAVLLPMAFFGGSTGVIYKQFSITIVSAMAL
SVLVALIFTPALCATMLKPIDPEKHGQPKRGFFGWFNRTFDRGVLSYERGVSNMIKHKAP
SFLVYLLVIVGMIWLFTRIPSAFLPEEDQGVIFAQVQTPVGSSAERTQTVIDDMRAYLLN
DKEGEPGEGKAVQSVFTVNGFNFAGRGQSSGLAFVMLKSWDERDASTSVFEVAKRAQGYF
SQTFKDAMVFAIVPPSVLELGNATGFDVFLQDQGGVGHDKLMQARNQFLGMAAQSKILAG
VRPNGVNDEPQYELTIDDEKASAQGISLSSINQTLAIALGGSYINDFIDRGRVKKVYIQG
EAASRMTPEDLNKWFVRSADGKMVPLSAIASGAWIYGSPKLSRYNGVAAMEILGTPAPGY
STGDAMAEVERIAKELPAGIGYAWTGLSYEERLSGSQAPALYALSLLVVFLCLAALYESW
SIPIAVVLVVPLGVIGALMATSMRGLSNDVFFQVGLLVTVGLASKNAILIVEFAKELHEQ
GKGIVEAAIEASRMRLRPIIMTSMAFVLGVLPLAISSGAGSGSQHAIGTGVIGGMITATV
LAIFWVPLFFVTVSAIGSRKKTDKSDTPHTPKEAG
NT seq
3168 nt
NT seq
+upstream
nt +downstream
nt
atgtcgaaattttttatcgaccgtcccatcttcgcctgggtaattgccctggtgatcatg
ctggtcggggctttgtcgatcctcaagttgcccatcaaccaatacccggccattgcacca
acggccattgatatccaggtcacctacccaggtgcttcggcgcaaaccgtgcaggacacc
gtggtacaggtcatcgagcagcagctcaacggtatcgacaacctgcgttatgtttcctcg
gacagtaactccgacggcagcatgaccatcaccgcgacgttcaaccagggcaccaacccg
gacatcgcccaggtccaagtgcagaacaagctgaacctggcaaccccattgctgcctcaa
gaagtgcagcaacagggtatccgcgtgaccaagtcagtgaagaacttcctgatggtgatc
ggcctggtgtccgaagacggctccatgaccaaggacgacctgtccaactacattgtctcc
aacattcaggacccgatttcccggacgtctggcgtaggtgacttccaggtcttcggttcc
cagtacgccatgcgtatctggctcgacccggccaagctgaacaacttccagatgacgccg
gtggatgtcagcaatgccgtccaggcgcagaacgtgcaggtggccactggtcaactgggc
ggcttgcctgccctgcctggcacacaactgaacgccacgatcatcggcaagacgcgcctg
cagaccgccgagcagtttgaaaatattctgctgcgggtgaatgccgacggttcccaggta
cgcctgggcgatgttgcccgtgtcgaactgggcggccagaactacagcatcagtgcgcag
ttcaacggcaagccggcttccggcatggcgatcaagctggcatccggtgccaacgccctg
gacactgccaaggccatccgtgaaacggttgcgtccctcgaaccgttcttcccgcctggc
atgaaagccgtggttccgtacgacaccactccagtggtgaccgaatcgatttccggggta
gtcgataccctggtcgaggcgatcgtcctggtgttcctggtgatgtacctgttcctgcag
aacttccgcgccaccatcatcaccacgatgacggtgccagtagtattgctgggtacgttc
gggatccttgcggccttcggcttcacgatcaacaccctgaccatgttcggcatgatcctg
gccatcggcttgctggtggacgatgcgatcgtggtggtggagaacgtcgagcgggtaatg
gccgaggaacacttgtcgcccaaagaagcgacggtcaagtccatggagcagatccagggc
gccctggtgggtattgccttggtactctcggcggtactgctgccgatggcgttcttcggc
ggatccacgggggtcatctataaacagttctccatcaccattgtctcggcgatggcgctg
tcggtactggttgcactgatcttcaccccggccttgtgcgccaccatgctcaagccgatc
gatcccgagaaacacggccaacccaagcgtggtttcttcggctggttcaaccgcaccttc
gaccgtggcgtactgagctacgagcgtggcgtgagcaacatgatcaagcacaaggcaccg
tcgttcctggtgtacctgctcgtcatcgtcggcatgatctggctgttcacccgcattcca
agcgcgttcctgcccgaggaagaccagggtgtgatcttcgcccaggtgcagacgccggtg
ggctcctccgctgaacggacccagacggtcatcgacgacatgcgcgcctacctgttgaac
gacaaggaaggcgagccgggcgaaggcaaggccgtgcaatcggtgtttaccgtaaacggc
ttcaactttgccggtcgtggccagagttcgggcctggcgttcgtcatgctcaagtcatgg
gatgaacgcgatgcatcgacatcggtgtttgaagtggccaagcgtgcacaaggttacttc
tcccagaccttcaaggacgccatggtgttcgccatcgtgcccccgtcggttctggaactg
ggtaacgccaccggtttcgacgtattcctgcaggaccagggcggtgtcggccatgacaag
ctcatgcaggcccgcaaccagttcctcgggatggctgcgcaaagcaagatcctcgcaggc
gttcgtccaaacggcgtcaacgatgagccgcagtacgagctgaccatcgacgacgagaaa
gccagcgcccagggcatcagcctgtccagcatcaaccagaccctggcgattgccctgggt
ggcagctacatcaacgacttcatcgaccgcggtcgggtgaaaaaggtctacatccagggt
gaggccgccagccggatgacccctgaagacctgaacaaatggttcgtgcgcagcgccgac
ggcaagatggtgccactctcggccattgcctcgggcgcctggatctacggctcgccgaag
ctgtcgcgatacaacggtgtagcagcgatggaaatcctcggcaccccggcaccgggctac
agcaccggtgacgcgatggccgaggtcgagcggatcgccaaggaactgccagctggtatc
ggctacgcctggactggcctgtcgtatgaagaacgcttgtccggctcccaggcacctgcg
ctgtacgccctgtcgttgctggtagtgttcctctgcctggccgcactgtacgaaagctgg
tcgatcccgattgcggtggtactggttgtgccgctgggtgtcatcggtgcactgatggct
accagcatgcgaggactgtccaacgacgtgttcttccaggtggggctgttggtgaccgtc
ggcctggcctcgaagaacgccatcctgatcgtggaattcgccaaggaactccacgagcag
ggcaaaggcatcgtcgaggcagccatcgaggcatcccgcatgcgtctgcgtccgatcatc
atgacctccatggcgttcgtcctcggcgtactgcccctggcgatctcctcgggcgcaggt
tcaggcagccaacatgccatcggtaccggcgtaattggcggtatgatcactgcaaccgtt
ctggcgatcttctgggtgccactgttctttgtaaccgtgtccgccattggcagccgcaag
aaaaccgacaagtccgatacaccgcacactcctaaagaggctggctaa
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