Prevotella intermedia: PIN17_A1616
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Entry
PIN17_A1616 CDS
T02058
Symbol
nth
Name
(GenBank) endonuclease III
KO
K10773
endonuclease III [EC:3.2.2.-
4.2.99.18
]
Organism
pit
Prevotella intermedia
Pathway
pit03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
pit00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
PIN17_A1616 (nth)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pit03400
]
PIN17_A1616 (nth)
Enzymes [BR:
pit01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
PIN17_A1616 (nth)
DNA repair and recombination proteins [BR:
pit03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
PIN17_A1616 (nth)
Prokaryotic type
PIN17_A1616 (nth)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HhH-GPD
HHH
RecR_HhH
HHH_5
HHH_8
Motif
Other DBs
NCBI-ProteinID:
AFJ08270
LinkDB
All DBs
Position
II:complement(1675793..1676446)
Genome browser
AA seq
217 aa
AA seq
DB search
MTRKERYNYILDYFRKNVGEVSTELMFGSAFQLLCATLLSAQCTDKRINAITPALFAKFP
DAKAMAAAEVEDVFELVRSVSYPNSKAKHLVEMARMVVDAYGGEIPSDPNELVKLPGVGR
KTANVLQAVWFGKPTLAVDTHVYRVSHRLGLVPADANTPRKVEDYLMRNIPLNEVSSAHH
WILLHGRYICKSLRPMCEKCPFEFFCPKNMDNSKLNK
NT seq
654 nt
NT seq
+upstream
nt +downstream
nt
atgacaagaaaagaacgctataactacatattggattatttcaggaagaacgttggcgaa
gtatctaccgaattgatgttcggttcggctttccagttattatgcgcaactttgctttct
gcacaatgcaccgacaaacgcataaatgccattactcccgcattgtttgccaagtttccc
gatgcgaaagctatggctgctgccgaagtagaagacgttttcgagcttgtgcgcagcgtt
tcttacccaaattcaaaggcaaaacatttggttgaaatggcacgtatggttgtagatgca
tacggtggcgaaataccttcagaccccaacgagctggtgaaactgcctggagtagggagg
aaaaccgcaaatgtgttgcaggcagtatggttcggaaagccaactttggcagtagacacg
cacgtctatcgtgtcagtcatcggttggggttggtacctgccgatgccaacacaccacgt
aaggtggaagactatctgatgcgtaacattcctttgaacgaggtgtcttcagcccaccat
tggatactcctgcacggccgatatatctgcaagagcctgcgtccgatgtgcgaaaaatgc
ccatttgagtttttctgccctaagaatatggataatagcaaactaaataagtag
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