Polynucleobacter ibericus: AOC20_00890
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Entry
AOC20_00890 CDS
T09789
Name
(GenBank) UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase
KO
K01928
UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:
6.3.2.13
]
Organism
piu
Polynucleobacter ibericus
Pathway
piu00300
Lysine biosynthesis
piu00550
Peptidoglycan biosynthesis
piu01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
piu00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
AOC20_00890
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
AOC20_00890
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
piu01011
]
AOC20_00890
Enzymes [BR:
piu01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.13 UDP-N-acetylmuramoyl-L-alanyl-D-glutamate---2,6-diaminopimelate ligase
AOC20_00890
Peptidoglycan biosynthesis and degradation proteins [BR:
piu01011
]
Precursor biosynthesis
Amino acid ligase
AOC20_00890
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Mur_ligase_M
Mur_ligase_C
Mur_ligase
YqeC
LpxK
Motif
Other DBs
NCBI-ProteinID:
QWE08811
LinkDB
All DBs
Position
156709..158259
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AA seq
516 aa
AA seq
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MRVNLKIDTNQLIDHLHTLANSSAKVCADSRQIQPGDIFFAYPVGHGNALRDGRQFISTA
LKSGAAAVVFDSAGMDNQFEDHPQCFAVENLATKAGNLCAQWYGYPSKALKIIGVTGTNG
KTSITQWLAQALDTSNHRTAVLGTLGTGFPGALVQTGYTTPDAPKLQTQLAELLNSGAKQ
VAMEVSSHALHQDRVAGIEFNCAVFTNLSQDHLDYHGSMADYAEAKARLFQQTSLKHAVI
NLDDAFGRELAMNLLAKESLKVWAYALSQSAFQGFEKFGDRLQRIYAKDTVLSGFGFDSN
FVCDGVGSNQLHIPLVGEFNLSNALAVWAVLLTQGIYSEDAAKKVSQLNPVLGRMELIRL
GKSQKTDALLAVVDYAHTPDALEKTLQALRPIAKQRGGKVWCVFGCGGDRDTGKRALMGA
VAERNADQVLITSDNPRSEDPQAIMQMIRSGMKADAQNIQIIADRAAAIMAAIRHANVCD
IVLVAGKGHETTQEINGKKFDFSDQEHIRLAAGGIV
NT seq
1551 nt
NT seq
+upstream
nt +downstream
nt
atgagggtgaacttgaaaatagacaccaatcagctgattgaccacctacacaccctagcg
aattcttccgcaaaagtgtgcgcggatagtcgccagattcagcctggcgatatctttttt
gcatacccagttggtcatggcaatgctttgcgtgatgggcgtcagtttattagtactgct
ttgaagagtggtgcagctgccgtggtgtttgattcagctggcatggataatcaattcgag
gatcatccacaatgttttgcagttgaaaatcttgctacaaaagctggtaatttgtgcgcg
caatggtatggctaccctagtaaagcattaaaaattattggcgtgactggcactaatggc
aaaaccagtattacgcagtggttggctcaagcattagatacaagtaatcatcgcactgca
gtgctaggaactttgggcaccggctttccgggtgcgctagtacaaaccggctataccacc
ccagacgcccctaaattgcagactcagttggcagagttgcttaactccggagcaaaacaa
gtggcgatggaagtatcttcgcatgcattgcatcaagatcgtgttgctggaattgaattt
aattgtgcggtgttcaccaatttaagccaggatcatttggattaccacggcagtatggct
gattacgctgaggcaaaggcgaggttgtttcagcagaccagtcttaagcatgcggttatt
aatttagatgatgcatttggtcgtgagttagccatgaatttactggcgaaagagagtttg
aaggtctgggcgtatgcattgtcccaatctgcttttcaaggcttcgaaaaatttggagat
cgattgcagcgcatttacgcaaaagatactgtgctgagtggttttggcttcgactccaac
tttgtttgcgacggggtaggtagtaatcaattgcatattccattagtgggtgaatttaat
ttaagcaatgctctggcagtctgggcagtattgcttacccaaggaatttattctgaagat
gctgccaaaaaagtgagtcaattaaacccagtgcttggccgcatggaactcattcgttta
ggtaaatctcaaaagactgatgctttgttagcagttgtagattacgcacacactcccgat
gctttagagaaaactctccaggcactgcgtcctatagccaaacaacgtggtggaaaagta
tggtgtgtatttggttgtggtggcgatcgtgatactggtaaacgtgcattgatgggtgct
gttgccgaacgcaatgccgatcaagttctaatcacgagcgataatcctcgctctgaagat
ccacaagccattatgcagatgattcgcagtggtatgaaagcggatgcacagaatattcaa
ataattgctgaccgtgcagcagccattatggctgcaattcgtcacgccaatgtatgcgac
attgtcttagttgccggcaagggtcatgaaactacgcaagagattaacggtaaaaagttt
gatttctctgaccaagagcatattcgtctggctgctggagggatcgtctga
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