Polynucleobacter ibericus: AOC20_03550
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Entry
AOC20_03550 CDS
T09789
Name
(GenBank) efflux RND transporter permease subunit
KO
K18138
multidrug efflux pump
Organism
piu
Polynucleobacter ibericus
Pathway
piu01501
beta-Lactam resistance
piu01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
piu00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
AOC20_03550
01503 Cationic antimicrobial peptide (CAMP) resistance
AOC20_03550
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
piu02000
]
AOC20_03550
01504 Antimicrobial resistance genes [BR:
piu01504
]
AOC20_03550
Transporters [BR:
piu02000
]
Other transporters
Electrochemical potential-driven transporters [TC:
2
]
AOC20_03550
Antimicrobial resistance genes [BR:
piu01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
AOC20_03550
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ACR_tran
SecD_SecF_C
Motif
Other DBs
NCBI-ProteinID:
QWE09296
LinkDB
All DBs
Position
676779..679907
Genome browser
AA seq
1042 aa
AA seq
DB search
MLSKFFIERPVLANVIALMMLLIGAVSINSLPIAQYPNIVPPTIQVTARYPGASATLVQQ
LVASNIETQVNGVEGMLYMESASTNDGNYTLTVTFKVGTDPDLAQVNVQNRVAIALPSLP
QAVQKQGVTTKTQSTAILQFVTLTSSNPDHDGLFLSNLANLKLQQRLARLPGVAAANVFG
VGNYSMRVWLDPAQLKMRNLTPSDVIAVINKQNVLLTAGQIGAPPTPMGQDFQLTLNVTS
AMTTPEQFGKIVVKSGGKAAITYLRDIARIEMGSQNYSQFFKINDSPAGGIAIYQMPGAN
AIATAQAVQDEMKSIAKTLPKEVSWAIPFDTTMFVQASIHEVYKTLYEAGILVLLVIMIF
LQNWRATLVPATTVPVTIIGAFACMAALGFSINLLTLFAIVLCIGIVVDDAIVVVEAVSK
KVEEGEDPKQGAIDAMTALMGPIIGITLVLMAVFIPASFIAGITGQMYRQFALVIAATAL
ISGINAITLKPTQSAQYLKPIDKNLVKNKLYQKFDLYFNRLATWYGHKIEGLMKNRAKAS
MVGIAIIVASLIGLTFVPSGFIPNEDQGYLVVSTTLPDAASLQRTEEGMKKAVDVIKKVP
GVETVVVIGGINLLNNSSSQSNSGALYVIMKKWEERGKGQGLRDIYNNMNEGLKQVQELK
SFVLLPPAIPGLGLSGGFEMRLMLTDGSNNFAKLDAATKAFLDEAQKQPEIMMAFTPFQN
NVPQLQLSFNVGRAETFGVEIGDAYDVLQSYLGSSYVNQFFKYGQTYQVYVQADGKYRSA
IEQVNRLYVKNKSGNMVPLGSFIDVKETTGPAFASQFQLYPSAAVLGAAKEGYSSGQAMQ
ALEQVAKNLPDGVAFQWAGMSYQEDLVGNTVILIFALSILLVYLVLAAQYETWVAPLAVL
TAVPLSLSGTVLALLLTGLSNNIYVQIGLVLMIALSCKNSILIVEVAIECRHKGMSFVDA
ALEASRERFRPIVMTSIAFILGVMPLLLSTGAGAAARISLGITVFSGMIASTCLAVALVP
IFYVEIETFFENRKNKKLNKSV
NT seq
3129 nt
NT seq
+upstream
nt +downstream
nt
atgctatctaaattttttatcgaacggccggtactggccaatgtcattgctctgatgatg
ctgctgatcggggcagtatcgattaatagtttgccgattgctcagtaccctaatattgtt
ccgcctaccattcaagtgaccgccagatatccaggcgcaagtgcaactcttgtacagcaa
ttggttgctagcaatattgaaactcaggtgaatggtgttgaggggatgctctacatggag
tcggcatcaaccaatgatggcaactacaccctaacagttacttttaaggttggcaccgac
cctgatttagcacaggtgaacgtacaaaaccgggtagctattgcgctgccatctttacct
caggcagtacaaaagcagggcgttacaaccaaaacacaatctactgccattttgcagttc
gttaccctgacttcatccaatccagatcatgacggcttatttttaagtaacctcgcaaac
cttaagctacaacagcgcttagcgcgattaccaggtgtggctgcagccaatgtgtttggg
gtaggtaactacagtatgcgagtttggcttgatcctgcccaactcaagatgcgcaatctc
acgccaagtgatgtgatagcggttattaataagcaaaacgtcttgcttacagcaggacaa
attggtgcgccaccaaccccgatggggcaggactttcagttgacactgaatgtcacgagc
gcgatgacaacccctgagcagttcggaaaaattgtggttaagtcaggtggtaaggcggct
atcacttacttgcgtgacatcgccagaatagaaatgggtagtcagaactatagtcaattc
ttcaagattaatgacagtcctgcaggtggtattgcgatctatcaaatgcctggtgctaat
gcgattgctactgcacaagcagtgcaagatgaaatgaaaagcatcgccaaaacactgcca
aaagaggtgtcttgggctattccgtttgataccacgatgtttgtgcaagcctctattcat
gaagtatataaaacgctctatgaagcaggcatcttagtattgctcgtgatcatgattttc
ttgcagaactggcgtgccacgctggttcctgcaacgacagtgcctgtgaccattattggc
gcatttgcgtgtatggcagctcttgggttctcgatcaacttgctcactttatttgccatt
gttttatgtatcggtattgtggtggatgatgcgatcgtggtggtagaggctgtttctaag
aaggtggaagagggcgaagatcctaagcagggtgcaattgatgctatgactgctttgatg
ggtccgatcattggtattactttggtcttaatggcagtatttatccccgcttcatttatt
gccggtatcaccggtcagatgtatcgccagtttgcattggtgattgcagcaacagcatta
attagtggcataaatgcgattaccttaaagccaactcagtctgcccagtacttaaagccg
atcgataaaaacttagttaaaaataaactttatcaaaagtttgatttgtatttcaatcgc
ctcgcaacttggtatggccacaagattgaaggcttgatgaaaaaccgagccaaagcctcg
atggtaggtattgcaattattgtggcttcactcattggattgacgtttgtcccttcgggg
tttattccaaacgaagatcaaggttatttagtggtatcaaccaccttgcctgatgcagca
tctttgcagcgcactgaagagggaatgaaaaaagccgttgacgtaatcaagaaggttccc
ggtgttgagactgttgtagtcattggtggcattaatttgttgaacaacagtagctctcag
tccaatagcggtgctttgtacgtcattatgaagaagtgggaagagcggggcaaaggtcag
ggtcttcgtgacatttataacaatatgaatgaggggctgaagcaggttcaagagcttaaa
tcctttgtgctattaccgccagctattcctggattgggactatccggtggttttgagatg
agactcatgctcaccgacggtagtaataattttgctaagttggatgccgctactaaggcc
ttccttgatgaagcacaaaaacagccagaaattatgatggcctttacgcctttccaaaat
aatgtgccgcaacttcaactcagtttcaatgtgggtagagcggaaacttttggtgtcgag
atcggtgatgcttatgatgtattgcaatcctacctaggatcttcttacgtcaatcaattc
tttaagtatggccagacctaccaagtgtatgtgcaggctgatggtaaataccgtagtgct
attgagcaggtgaatcgtctctatgtcaaaaataagagtggcaatatggttccactcgga
tctttcattgacgtcaaagaaaccactggaccagcatttgcatctcagtttcagctttat
ccctcagctgctgtcttgggcgcagccaaagagggctacagttctggacaggcaatgcaa
gccctggagcaggttgccaagaatttgcctgacggtgtcgcattccagtgggctggcatg
tcatatcaagaggatttggtcggtaacaccgtcatcttgatctttgcgttatcgatcttg
ttggtgtacttggtactcgcagctcaatatgaaacttgggttgctccgctggctgttctg
actgcagtaccactgtccttgtctggaaccgtcttggctttattgctcacaggtctatca
aacaatatttatgtgcagattggcctagtgttgatgattgcactttcttgcaagaactcc
attttgattgtggaggtcgctattgaatgcaggcataaaggcatgagttttgtggatgct
gcactggaagcttcaagagaacgctttagaccaatcgtcatgacgtccatcgcctttatt
ttaggcgttatgcctttgctcctgtctactggcgccggtgcagcagcgcgtatctctttg
ggtattaccgtatttagcggcatgatcgcttctacctgccttgccgtggcattggttccc
atcttttatgtagagatcgaaactttctttgagaatcgtaaaaataagaagctcaataag
tcagtgtag
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