Polynucleobacter ibericus: AOC20_09240
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Entry
AOC20_09240 CDS
T09789
Name
(GenBank) efflux RND transporter periplasmic adaptor subunit
KO
K03585
membrane fusion protein, multidrug efflux system
Organism
piu
Polynucleobacter ibericus
Pathway
piu01501
beta-Lactam resistance
piu01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
piu00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
AOC20_09240
01503 Cationic antimicrobial peptide (CAMP) resistance
AOC20_09240
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
piu03036
]
AOC20_09240
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
piu02000
]
AOC20_09240
01504 Antimicrobial resistance genes [BR:
piu01504
]
AOC20_09240
Chromosome and associated proteins [BR:
piu03036
]
Prokaryotic type
Chromosome partitioning proteins
Divisome proteins
AOC20_09240
Transporters [BR:
piu02000
]
Other transporters
Accessory factors involved in transport [TC:
8
]
AOC20_09240
Antimicrobial resistance genes [BR:
piu01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
AOC20_09240
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HlyD_D23
HlyD_3
Biotin_lipoyl_2
CusB_dom_1
Motif
Other DBs
NCBI-ProteinID:
QWE09677
LinkDB
All DBs
Position
complement(1818823..1820010)
Genome browser
AA seq
395 aa
AA seq
DB search
MGQKWRGTKAHQKLMAMEPLQRRMTVMLCGVFLLLGLIFAFNQLKTFMIKHFIAGMGLPP
ATVSTLVIATSEWQPKLSSVGNVRAFRGVELSTELGGLVQTVPIKSGQDVKEGELLIKLN
DASDVAQLNSLKAMADLAKVINERDRQQLAIQAISKNVFDTSAADAKSKQAQVEQQTALV
AKKNLKAPFAGRVGIVSINPGQYVNPGDKLLTLQTLDPIFVDFNLPQNNAEQVQVGQEVV
VTTDAFKDASFTGKITAVSPKVDTNTRNIQVEAKLANPDKKILPGMFANVNIKLGDQVKY
LTLPQTAVTYNPYGSTVFIAKPTGKKDKQGNPALEAQQVFVTTGLTRGDQVAILKGVDEG
ATVVTSGQLKLKNGTPLIINNKVQPANSPDPKPQE
NT seq
1188 nt
NT seq
+upstream
nt +downstream
nt
atgggtcaaaaatggcgcggtacaaaagcccaccaaaagctgatggctatggagcctttg
cagcgtcgtatgaccgtcatgctgtgtggcgtgttcttgttgttgggtctgatttttgct
ttcaatcagttgaagactttcatgattaagcatttcattgcaggtatgggcttgcctcca
gcaacagtatctaccttagtcatcgccacttccgaatggcagccaaaattatctagcgtt
ggtaatgtacgcgcatttagaggtgttgaactcagcaccgagcttggcggcctggtgcaa
acagtacccattaagtcgggtcaagatgttaaggaaggcgagcttctcattaagttgaat
gacgcttccgatgtagcccaattgaattctttaaaagcaatggcagatttggctaaagta
atcaacgagcgtgataggcagcagctggcaattcaagcgattagtaagaatgtatttgat
accagcgctgctgatgcgaaatccaaacaagcgcaggttgagcagcaaacagctttagta
gcaaagaagaatctgaaggcaccatttgcggggcgcgtaggcattgtgtcgattaatcca
gggcagtatgtaaaccctggtgataagttattaacattacaaaccttggaccccattttt
gttgattttaatttgcctcaaaacaatgctgagcaagtccaggtagggcaagaagtggtt
gtgacaactgatgcatttaaggacgccagctttactggcaagattaccgctgttagcccg
aaggtagataccaacacccgtaatattcaagtagaagccaagcttgctaatccggataag
aaaattctgccgggtatgtttgctaatgtgaatatcaagctgggcgatcaagtgaaatac
ttaaccttgcctcagaccgcagtgacatacaacccctatggctcaacagtatttattgct
aaacctactggtaagaaagataagcaaggtaatccagctcttgaggcgcaacaagtattt
gtcaccactggtttgactcgtggtgatcaggttgccattttgaagggtgtggacgaaggt
gcaacagttgtgactagtggtcagctgaagcttaagaatggcacaccattgattattaat
aacaaggtgcagccagctaactcaccagatccaaagccgcaggaataa
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