Pseudomonas inefficax: RIN61_03040
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Entry
RIN61_03040 CDS
T09811
Name
(GenBank) 2-oxoglutarate dehydrogenase E1 component
KO
K00164
2-oxoglutarate dehydrogenase E1 component [EC:
1.2.4.2
]
Organism
pix
Pseudomonas inefficax
Pathway
pix00020
Citrate cycle (TCA cycle)
pix00785
Lipoic acid metabolism
pix01100
Metabolic pathways
pix01110
Biosynthesis of secondary metabolites
pix01120
Microbial metabolism in diverse environments
pix01200
Carbon metabolism
pix01210
2-Oxocarboxylic acid metabolism
Module
pix_M00009
Citrate cycle (TCA cycle, Krebs cycle)
pix_M00011
Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
Brite
KEGG Orthology (KO) [BR:
pix00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
RIN61_03040
09108 Metabolism of cofactors and vitamins
00785 Lipoic acid metabolism
RIN61_03040
Enzymes [BR:
pix01000
]
1. Oxidoreductases
1.2 Acting on the aldehyde or oxo group of donors
1.2.4 With a disulfide as acceptor
1.2.4.2 oxoglutarate dehydrogenase (succinyl-transferring)
RIN61_03040
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Paralog
Gene cluster
GFIT
Motif
Pfam:
OxoGdeHyase_C
Transket_pyr
E1_dh
2-oxogl_dehyd_N
DUF7284
PFOR_II
Motif
Other DBs
NCBI-ProteinID:
WNN40301
LinkDB
All DBs
Position
complement(669095..671926)
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AA seq
943 aa
AA seq
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MQESVMQRMWESAHLSGGNAAYVEELYELYLHDPNAVPEEWRTYFQKLPADGSTATDVSH
STIRDHFVLLAKNQRRAQPVSAGSVSSEHEKKQVEVLRLIQAYRMRGHQAAKLDPLGLWQ
RPAPVDLSINHYGLTNADLDTTFRAGDLFIGKEEASLREIFEALQKTYCRTIGAEFTHIV
DSEQRSWFQQRLESVRGRPEFSADVQAHLLERVTAGEGLEKYLGTKYPGTKRFGLEGGES
LIPMLDEMIQRSGSYGTKEVVIGMAHRGRLNVLVNTFGKNPRELFDEFEGKKMNELGSGD
VKYHQGFSSNVMTPGGEVHLAMAFNPSHLEIVSPVVEGSVRARQDRRNDTVGDKVLPISI
HGDAAFAGQGVVMETFQMSQTRGFKTGGTVHIVINNQVGFTISNPLDARSTEYATDVAKM
IQAPILHVNGDDPEAVLFVTQLAIDYRMQFKRDVVIDLVCYRRRGHNEADEPNGTQPLMY
QQISKQRTTRELYAEALIQAGRIDAERAQAKIDEYRNALDNGLHVVKSLVKEPNRELFVD
WRPYLGHAWTARHDTRFDLKTLQELSAKLLEIPEGFVVQRQVAKIYEDRQKMQAGGLPIN
WGYAETMAYATLQFEGHPIRMTGQDIGRGTFSHRHAVLHNQKDASTYVPLKNLFPGQPQF
ELYDSFLSEEAVLAFEYGYSTTTPNALVIWEAQFGDFANGAQVVIDQFITSGEHKWGRLC
GLTMLLPHGYEGQGPEHSSARLERYLQLCAEHNIQVCVPTTPAQIYHLLRRQVIRPLRKP
LIVLTPKSLLRHKLAISTLEELAEGSFQTVIPEIDSLDPAKVERLVLCGGKVYYDLLEKR
RAEGREDIAIVRIEQLYPFPEDDLVEILAPYTNLKHAVWCQEEPMNQGAWYSSQHHMRRI
LGRHNKALVLEYAGRDASAAPACGYASKHAEQQEKLLQDAFTV
NT seq
2832 nt
NT seq
+upstream
nt +downstream
nt
atgcaagaaagcgtgatgcagcgcatgtgggaaagcgcccacctttcaggtggtaacgct
gcatatgtggaagagctttatgagctctacctgcacgaccctaacgctgtgccagaagag
tggcgcacctacttccagaagttgcccgccgacggcagcaccgctaccgatgtatcgcac
tcgacaatccgcgaccatttcgtactgctggcaaagaaccagcgccgcgcccaaccggta
tccgccgggagcgtgagcagtgaacacgagaagaagcaggttgaagttctgcgactgatc
caggcctatcgtatgcgcggccatcaggctgccaagctcgacccgttggggttgtggcag
cgtcctgcgcccgtagacctgtcgatcaatcactacggcttgaccaatgccgatcttgat
acgaccttccgtgccggcgacctgttcatcggcaaagaggaagcgagcctacgcgagatc
ttcgaggcgctccagaagacatattgtcgcaccattggcgccgagttcacccacatcgtc
gattccgagcagcgcagctggttccagcagcgcctggaaagcgtgcgcggccgtccggag
ttttccgctgacgtgcaggcccacctgctcgagcgcgtgaccgccggtgaaggccttgag
aagtacctgggcaccaagtacccgggcaccaagcgtttcggcctcgagggcggcgaaagc
ctgatcccgatgctggacgagatgatccagcgttccggttcctacggcaccaaggaagtc
gtcatcggcatggcccaccgtggccgcctgaacgtgctggtcaacaccttcggcaagaac
ccgcgcgagctgttcgacgagttcgaaggcaagaagatgaacgagctgggctccggtgac
gtgaagtatcaccagggcttctcctcgaacgtgatgaccccgggtggcgaagtgcacctg
gccatggcgttcaacccgtcccacctggaaatcgtctccccagtggtcgagggttcggtg
cgcgcccgtcaggaccgccgcaacgacaccgttggcgacaaggtgctgccgatctcgatc
cacggcgacgcagcgttcgccggccagggcgtggtcatggaaaccttccagatgtcgcag
acccgcggtttcaagaccggcggcaccgtgcacatcgtgatcaacaaccaggttggtttc
accatcagcaacccgctggacgcgcgctccaccgagtacgccaccgacgttgccaagatg
atccaggcgccgatcctgcacgtgaacggcgacgacccggaagccgtactgttcgtgacc
cagctggccatcgactaccgcatgcagttcaagcgtgacgtggtcatcgacctggtctgc
taccgccgtcgcggccacaacgaggccgacgagccgaacggcacccagccgttgatgtac
cagcagatcagcaagcagcgcacgactcgtgaactgtatgccgaggcactgatccaggcc
ggccgcatcgatgccgagcgcgcccaggccaagatcgacgagtaccgcaacgcgctggac
aacggcctgcatgtggtgaagagcctggtcaaggagccgaaccgcgagctgttcgtcgac
tggcgtccgtacctgggccatgcctggaccgcgcgtcacgacacccgcttcgacctcaag
accctgcaggaactgtcggccaagctgctggagatcccggaaggtttcgtcgtccagcgc
caggtcgccaagatctacgaagaccgccagaagatgcaggccggtggcttgccgatcaac
tggggttatgcagagaccatggcttacgccaccctgcagttcgaaggtcacccgatccgc
atgaccggccaggacatcggccgtggcaccttctcgcaccgtcacgcggtgctgcacaac
cagaaggacgccagcacctacgtaccgctgaagaacctgttcccgggccagccacagttc
gaactgtacgactccttcctgtcggaagaagcggtactggccttcgaatacggctactcg
accaccacgccgaacgcgctggtgatctgggaagcccagttcggcgacttcgccaacggt
gcgcaagtggtgatcgaccagttcatcaccagcggcgagcacaagtggggccgtctgtgt
ggcctgaccatgctgctgccccacggttatgaagggcagggcccggagcactcctccgcg
cgcctggagcgttacctgcagctgtgcgccgagcacaacatccaggtctgcgtaccgacc
accccggcccagatctaccacctgctgcgtcgccaggtcatccgtccgctgcgcaagccg
ctgatcgtgctgacgccgaagtcgctgctgcgccacaagctggccatctcgaccctggaa
gagctggcagaaggctcgttccagaccgtgatcccggaaatcgacagcctcgatccggcc
aaggtcgaacgcctggtcctgtgcggcggcaaggtttactacgacctgctggaaaaacgc
cgtgccgaaggccgcgaagacatcgccatcgtgcgtatcgagcagctgtatccgttccct
gaggacgacctggtcgaaatcctggcgccttacaccaacctcaagcatgcagtctggtgt
caggaagagccgatgaaccagggcgcctggtacagcagccagcaccacatgcgccgtatc
ctgggccgccacaacaaggcactggtcctggaatacgccggccgcgacgcttccgccgcg
ccagcctgtggttacgcatcgaagcacgccgaacagcaggaaaaactgctgcaagacgcc
ttcactgtttaa
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