Pseudomonas inefficax: RIN61_19550
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Entry
RIN61_19550 CDS
T09811
Name
(GenBank) NAD-glutamate dehydrogenase
KO
K15371
glutamate dehydrogenase [EC:
1.4.1.2
]
Organism
pix
Pseudomonas inefficax
Pathway
pix00220
Arginine biosynthesis
pix00250
Alanine, aspartate and glutamate metabolism
pix00430
Taurine and hypotaurine metabolism
pix00910
Nitrogen metabolism
pix01100
Metabolic pathways
pix01120
Microbial metabolism in diverse environments
Brite
KEGG Orthology (KO) [BR:
pix00001
]
09100 Metabolism
09102 Energy metabolism
00910 Nitrogen metabolism
RIN61_19550
09105 Amino acid metabolism
00250 Alanine, aspartate and glutamate metabolism
RIN61_19550
00220 Arginine biosynthesis
RIN61_19550
09106 Metabolism of other amino acids
00430 Taurine and hypotaurine metabolism
RIN61_19550
Enzymes [BR:
pix01000
]
1. Oxidoreductases
1.4 Acting on the CH-NH2 group of donors
1.4.1 With NAD+ or NADP+ as acceptor
1.4.1.2 glutamate dehydrogenase
RIN61_19550
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Gene cluster
GFIT
Motif
Pfam:
Bac_GDH_CD
GDH_C
GDH_ACT1
GDH_ACT2
GDH_HM3
GDH_ACT3
GDH_HM1
GDH_HM2
ELFV_dehydrog
Motif
Other DBs
NCBI-ProteinID:
WNN38376
LinkDB
All DBs
Position
4321183..4326048
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AA seq
1621 aa
AA seq
DB search
MAFFTAASKADFQHQLQAALAQHISEQSLPQVALFAEQFFGIISLDELTQRRLSDLAGCT
LSAWRIIERFDPEYPQVRVYNPDYERNGWQSTHSVVEVLHHDLPFLVDSVRTELNRRGYS
IHTLQTTVLSVRRGAKGELLELLPKGTQGEGVRHESLMYLEIDRCANAAELTVLAREIEQ
VLAEVRVVVADFEPMKAKLREVVAEVEQTAFGPAHHEKGEVKAFLEWLLDNHFTFLGYEE
FTVKGDADGGQMVYDEQSFLGLPRRLRVGLTSDELRIEDYAVAYLNEPLLLSFAKAALPS
RVHRPAYPDYVSIRQLDADGKVIKEHRFMGLYTSSVYGESVHAIPYIRQKVTEVERRSGF
DPKAHLGKELAQVLEVLPRDDLFQTPVDELFSTVMSIVQIQERNKIRVFLRKDPYGRFCY
CLAYVPREIYSTEVRQKIQQVLMERLKASDCEFWTFFSESVLARVQLILRVDPKNRIDID
PQQLEREVIQACRSWHDDYSALVIENFGEAQGTNILADFPKGFPAGYRERFAAHSAVVDL
QHVLNLSESKPLAMSFYQPLTQVGERTLHCKLYHADTPLALSDVLPILENLGLRVLGEFP
YRLRHANGRGYWIHDFAFTYSEGLSLDIQQLNDTLQDAFIHIVRGDAENDAFNRLVLTAG
LPWRDVALLRAYARYLKQIRLGFDLGYIASTLNNHTDIARELTRLFKTRFYLARKLTQED
LDDKQLRLEQAILTALDDVQVLNEDRILRRYLDLIKATLRTNFYQPDANGLNKSYFSFKF
NPKLIPELPKPVPKFEIFVYSPRVEGVHLRFGNVARGGLRWSDREEDFRTEVLGLVKAQQ
VKNSVIVPVGAKGGFLPRRLPLGGSRDEIAAEGVVCYRIFISGLLDITDNLKDGGVVPPA
NVVRHDDDDPYLVVAADKGTATFSDIANGIAIDYGFWLGDAFASGGSAGYDHKKMGITAR
GAWVGVQRHFRERGINVQEDPITVIGVGDMAGDVFGNGLLMSDKLQLVAAFNHLHIFIDP
NPEPAASFAERKRLFDLPRSAWSDYDTSIMSEGGGIFPRSAKSIAISPQMKERFAIDADR
LTPTELLNALLKAPVDLLWNGGIGTYVKASTESHADVGDKANDALRVNGNELRCKVVGEG
GNLGMTQLGRVEFGLHGGATNTDFIDNAGGVDCSDHEVNIKILLNEVVQGGDMTEKQRNQ
LLGSMTDEVAGLVLGNNYKQTQALSLAARRARERIAEYKRLMADLEARGKLDRAIEFLPS
EEQLAERLAAGQGLTRAELSVLISYSKIDLKEQLLKSLVPDDDYLTRDMETAFPPSLVSK
FAESMRRHRLKREIVSTQIANDLVNNMGITFVQRLKESTGMSPANVAGAYVIVRDIFHLP
HWFRQIEALDYQVPAEIQLTLMDELMRLGRRATRWFLRSRRNEQDAGRDTAHFGPKIAQL
GLKLDELLEGPTRERWMVRYQGFVDAGVPELLARMVAGTSHLYTLLPIIEAADVTGHEPA
QVAKAFFAVGSALDLTWYLQEISNLPVENNWQALAREAFRDDIDLQQRAITISVLQMADA
PEDMDARVALWAEQHRVMVERWRAMLDDLRNATGTDYAMYAVANRELVDLAMSGQAAVVP
S
NT seq
4866 nt
NT seq
+upstream
nt +downstream
nt
atggcgttcttcaccgcagccagcaaagccgacttccagcatcaactgcaagcggccctg
gcgcagcacatcagcgaacagtccctgccacaagttgcgctgttcgccgagcagttcttc
ggcatcatctctctggacgaactcacccagcgcaggctttccgacctggccggctgcacc
ctgtcagcctggcgcatcatcgagcgtttcgaccctgagtacccgcaagtacgggtgtac
aaccccgactacgaacgcaatggctggcaatcgacccacagcgtggtcgaagtgctgcac
cacgacctgccgttcctggtcgactcggtacgcaccgagctcaaccgccgcggctacagc
atccacaccctgcagaccaccgtgctcagtgtgcgccgcggcgccaagggcgagctgctg
gaactgctgcccaagggcacccagggcgagggcgtacgccatgagtcgctgatgtacctg
gagattgaccgttgcgccaacgctgccgaactgacggtactggcccgcgagatcgagcag
gtgctggccgaggtgcgggtggtggtggccgacttcgaaccgatgaaggccaagctgcgt
gaagtggtggcggaggtggagcagaccgcctttggcccggcgcaccacgaaaagggcgag
gtcaaggcgttcctcgagtggctgctggacaaccacttcaccttcctgggctatgaagaa
ttcaccgtcaagggcgacgccgatggcggccagatggtctacgacgagcagtcgttcctc
ggcctgccgcgccgcctgcgcgtgggcctgacgagcgacgagctgcgcatcgaagactac
gccgtggcctacctcaacgaaccgttgctgctgtccttcgcgaaggccgccctgccaagc
cgcgtacaccgcccggcctacccggactacgtgtcgatccgccagctggacgccgatggc
aaggtgatcaaggaacatcgcttcatgggcctgtacacctcgtcggtgtacggtgaaagc
gtgcatgccatcccttatatccggcagaaggtcaccgaagtcgagcgccgctctggcttc
gatcccaaggcccacctgggcaaggaactggcccaggtgctggaagtgctgccgcgcgac
gacctgttccagaccccggtcgacgagctgttcagcactgtcatgtcgatcgtgcagatc
caggaacgcaacaagatccgcgtgttcctgcgcaaggacccatacggccgcttctgctac
tgcctggcctatgtaccgcgggaaatctactccaccgaagtgcggcagaagatccagcag
gtgctgatggagcgcctgaaggccagcgactgcgaattctggaccttcttctccgaatcg
gtgctggcccgtgtacagctgattctgcgggtagacccgaaaaaccgcatcgacatcgac
ccgcagcagctggaacgcgaagtgatccaggcctgccgttcgtggcatgacgactactcg
gcgctggtaatcgaaaacttcggcgaagcccagggcaccaacatcctcgccgacttcccc
aaaggtttcccggctggctaccgcgagcgctttgccgcgcattcggcagtggtcgacctg
cagcacgtgctgaacctgtcggaaagcaagccgctggcgatgagcttctaccagccgctg
acccaggtcggcgagcgcaccctgcactgcaagctgtaccacgccgacacgccgctggcg
ctgtccgacgtgctgccgatcctggagaaccttggcctgcgcgtgctcggcgagttcccg
taccgcctgcgccatgccaatggccgcggctactggatccacgacttcgccttcacctac
agcgaaggcctgagcctggacatccagcagctcaacgacaccctgcaggacgccttcatc
cacatcgtccgcggcgatgccgagaacgacgccttcaaccgcctggtgcttaccgccggc
ctgccatggcgtgatgtggcgctgctgcgcgcctacgcccgttacctgaagcagattcgc
ctgggcttcgacctgggctacatcgccagcaccctgaacaaccacaccgacatcgcccgc
gagctgacccggttgttcaagacccgcttctacctggcgcgcaagctcacccaggaggac
ctggatgacaagcagctgcgcctggaacaagccatcctgaccgcgctggacgacgtacag
gtactcaacgaagaccgcatcctgcgccgctacctggacctgatcaaggccaccctgcgc
accaacttctaccagccggacgccaacggcctcaacaagtcgtacttcagcttcaagttc
aaccccaagttgatccccgagctgcccaaacctgtgccaaagttcgagatcttcgtctac
tcgccacgggtcgagggcgtgcacctgcgctttggcaacgtggcccgcggtgggctgcgc
tggtccgatcgcgaggaagacttccgcaccgaggtgctgggcctggtcaaagcccagcag
gtgaagaactcggtcatcgtgccggtcggcgccaagggcggcttcctgccgcgccgcctg
ccgctgggcggcagccgtgacgagatcgccgccgagggcgtggtgtgctaccgcatcttc
atttccggcctgctcgacatcaccgacaacctcaaggacggtggcgtggtgccgccggcc
aacgtggtacgccatgacgatgacgacccgtacctggtggtggcggccgacaagggcacc
gcgaccttctcggacatcgccaacggcattgccatcgactacggcttctggctgggcgac
gccttcgcctcgggcggctcggccggttacgaccacaagaagatgggcattaccgcgcgc
ggcgcctgggtgggcgtacagcgccacttccgcgagcgcggcatcaatgtgcaggaagac
ccgatcaccgtcattggcgtcggcgacatggccggcgacgtgttcggcaacggcctgctg
atgtccgacaagctgcaactggtggccgcgttcaaccacctgcacatcttcatcgacccg
aacccggagccagccgcaagctttgccgaacgcaagcgcctgttcgacctgccgcgctcg
gcctggagcgactacgacaccagcatcatgtccgaaggcggcgggatcttcccgcgcagt
gccaagagcatcgccatcagcccgcagatgaaagagcgcttcgccatcgacgccgaccgc
ctgaccccgaccgagctgctcaatgcgctgctcaaggcaccggtagacctgctgtggaac
ggtggcatcggtacctacgtcaaggccagtaccgagagccatgccgatgtcggcgacaag
gccaacgacgcgctgcgggtcaatggcaacgaactgcgctgcaaggtggtgggcgagggc
ggcaacctgggcatgacccagcttggccgggtcgagttcggcctgcacggcggcgccacc
aacaccgacttcatcgacaacgccggcggcgtggactgctccgaccacgaggtcaacatc
aagatcctgctcaacgaagtggtgcagggtggcgacatgaccgagaagcagcgcaaccag
ctgctgggcagcatgaccgacgaagtggccggcctggtgctgggcaacaactacaagcag
acccaggcgttgtcgctggcggcccgccgtgcccgcgagcgcattgccgagtacaagcgc
ctgatggccgacctggaagcccgtggcaagctggaccgcgccatcgagttcctgccgtcc
gaggaacagttggccgagcgcctggccgccggccagggcctgacccgcgccgagctgtcg
gtgctgatctcgtacagcaagatcgacctcaaggaacagctgctcaagtcgctggtgccg
gacgacgactacctgacccgcgacatggaaaccgccttcccaccgtcgctggtcagcaag
ttcgccgaatccatgcgccgtcaccgcctgaagcgcgagatcgtcagcacccagatcgcc
aacgacctggtcaacaacatgggcatcaccttcgtccagcgcctgaaggagtcgaccggc
atgagcccggccaacgtggccggggcctatgtgatcgtgcgcgacatcttccacctgccg
cactggttccgccagatcgaggcactggactaccaggtgccggcggagatccagctgacc
ctgatggacgagctgatgcgcctgggccgccgtgccacccgctggttcctgcgcagccgc
cgcaacgagcaggacgccgggcgtgacaccgcgcacttcgggccgaagatcgcgcaactg
gggctcaagctcgacgagttgctcgaaggcccgacccgcgagcgctggatggtgcgctac
cagggcttcgtcgacgccggtgtgccggaattgctggcgcgcatggtggctggcaccagc
catctgtacaccctgctgccgatcatcgaggcggctgatgtcaccggccatgagccggcg
caggtggccaaggcgttcttcgccgtgggcagcgcgctggacctgacctggtacctgcag
gaaatcagcaacctgccggtggagaacaactggcaggcgctggcccgcgaggcgttccgc
gacgacatcgacctgcagcagcgggcgatcaccatctcggtattgcagatggccgatgcg
ccggaagacatggacgcccgcgtggcgctgtgggccgagcagcaccgggtgatggtggag
cgctggcgcgccatgctggatgacctgcgcaatgctaccggtaccgactatgcgatgtac
gcggtggccaaccgcgagctggtcgacctggccatgagcgggcaggcggcggtggtgccg
tcctga
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