Pseudomonas inefficax: RIN61_21165
Help
Entry
RIN61_21165 CDS
T09811
Symbol
metH
Name
(GenBank) methionine synthase
KO
K00548
5-methyltetrahydrofolate--homocysteine methyltransferase [EC:
2.1.1.13
]
Organism
pix
Pseudomonas inefficax
Pathway
pix00270
Cysteine and methionine metabolism
pix00450
Selenocompound metabolism
pix00670
One carbon pool by folate
pix01100
Metabolic pathways
pix01110
Biosynthesis of secondary metabolites
pix01230
Biosynthesis of amino acids
pix04980
Cobalamin transport and metabolism
pix04981
Folate transport and metabolism
Brite
KEGG Orthology (KO) [BR:
pix00001
]
09100 Metabolism
09105 Amino acid metabolism
00270 Cysteine and methionine metabolism
RIN61_21165 (metH)
09106 Metabolism of other amino acids
00450 Selenocompound metabolism
RIN61_21165 (metH)
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
RIN61_21165 (metH)
09150 Organismal Systems
09154 Digestive system
04981 Folate transport and metabolism
RIN61_21165 (metH)
04980 Cobalamin transport and metabolism
RIN61_21165 (metH)
Enzymes [BR:
pix01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.13 methionine synthase
RIN61_21165 (metH)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Met_synt_B12
S-methyl_trans
Pterin_bind
B12-binding_2
B12-binding
CdhD
MtrH
Motif
Other DBs
NCBI-ProteinID:
WNN38677
LinkDB
All DBs
Position
complement(4673647..4677354)
Genome browser
AA seq
1235 aa
AA seq
DB search
MSDRSARLQALQNALEERILILDGGMGTMIQSYRLEEHDYRGTRFADWPSDVKGNNDLLL
LSRPDVIAAIEKAYLDAGADILETNTFNATQISQADYGMESLVYELNVEGARIARQVADA
KTLETPHKPRFVAGVLGPTSRTCSISPDVNDPGYRNVTFDELVTNYIEATRGLIEGGADL
LLIETIFDTLNAKAAIFAVQQVFEEDGIELPIMISGTITDASGRTLSGQTTEAFWNSVRH
AKPISVGLNCALGAKDLRPYLEELATKADTHVSAHPNAGLPNAFGEYDETPAEMAVVVEE
FAASGFLNIIGGCCGTTPGHIQAIAEAVAKYKPRKIPEIAKACRLSGLEPFTIDRQSLFV
NVGERTNITGSAKFARLIREENYTEALEVALQQVEAGAQVIDINMDEGMLDSQAAMVRFL
NLIAGEPDISRVPIMIDSSKWEVIEAGLKCIQGKGIVNSISMKEGVEQFKHHARLCKRYG
AAVVVMAFDEVGQADTAARKKEICQRSYDILVNEVGFPPEDIIFDPNIFAVATGIEEHNN
YAVDFIEACAYIRDHLPHALSSGGVSNVSFSFRGNNPVREAIHSVFLYHAIQNGLTMGIV
NAGQLEIYDEIPAALREKVEDVVLNRTPHGTDALLAIADDYKGGGATREVENEEWRSLPV
EKRLEHALVKGITAFIVEDTEECRQQCARPIEVIEGPLMNGMNVVGDLFGAGKMFLPQVV
KSARVMKQAVAHLIPFIEAEKGDKPEAKGKILMATVKGDVHDIGKNIVGVVLGCNGYDIV
DLGVMVPAEKILQTARDEKCDIIGLSGLITPSLDEMVHVAREMQRQGFQLPLMIGGATTS
KAHTAVKIEPKYSNDAVVYVTDASRAVGVATQLLSKELKPGFVEKTRQDYVEVRERTANR
SARTERLSYAQAVAAKPQYDWAGYQPAVPSFTGVKVLEDIDLRTLAEYIDWTPFFISWDL
AGKFPRILTDEVVGEAATALYKDAREMLDKLIDEKLISARAVFGFWPANQVADDDIEVYG
EDGQALATLHHLRQQTIKPDGKPNWSLADFVAPKASGVTDYVGGFITTAGIGAEEVAKAY
QDKGDDYSSIMVKALADRLAEACAEWLHEQVRKEHWGYARDEHLDNEALIKEQYRGIRPA
PGYPACPDHTEKETLFRLLDGTAIGETGPSGVFLTDHFAMFPAAAVSGWYFAHPQAQYFA
VGKVDKDQIERYSARKGQDVSVSERWLAPNLGYDS
NT seq
3708 nt
NT seq
+upstream
nt +downstream
nt
atgtccgaccgcagcgctcgtctccaagcactccagaacgcactcgaagagcgcatcctg
atcctcgacggcggcatgggtactatgatccaaagctaccggctcgaggaacacgactat
cgtggcacgcggttcgccgattggccaagcgatgtcaagggtaacaacgacctgttgctg
ctcagccgcccggatgtgatcgccgccatcgaaaaggcctacctggatgccggcgccgat
atcctcgagaccaacaccttcaacgccacgcagatttcccaggccgactacggcatggag
tcgctggtctacgagttgaacgtcgagggcgcgcgcatcgcccgccaggtggccgatgcc
aagaccctggaaaccccgcacaagccgcgcttcgtcgccggcgtgctcggccctaccagc
cgcacctgctcgatttccccggacgtcaacgaccccggctaccgcaacgtcactttcgac
gagctggtaacgaactacatcgaggctacccgcggcctgatcgaaggcggcgccgacctg
ctgctgatcgaaaccattttcgacaccctcaacgccaaggcggcgatcttcgccgtacag
caggtgttcgaggaagacggcatcgaactgccgatcatgatttccggcaccatcaccgat
gcctcgggccgcaccctgtcgggccagaccaccgaagcgttctggaactcggtgcgccac
gccaagccgatttccgtgggcctgaactgcgccctcggcgccaaggacctgcgcccctac
ctggaagagctggcgaccaaggccgacacccatgtctcggcccaccccaacgccggcctg
ccgaacgccttcggcgaatacgacgaaaccccggcggaaatggccgtggtggtcgaggaa
ttcgccgccagcggcttcctcaacatcatcggcggctgctgcggcaccactccgggccac
atccaggccatcgccgaggccgtggccaagtacaagccgcgcaagattccggaaatcgcc
aaggcctgccgcctgtccggcctggagccgttcaccatcgaccgccagtcgctgttcgtc
aacgtcggcgagcgtaccaacatcaccggctccgccaaattcgcccggctgatccgtgaa
gagaactacaccgaagcgctggaagtcgccctgcagcaggtcgaggccggcgcccaggtg
atcgacatcaacatggacgaggggatgctcgactcccaggccgccatggtccgcttcctc
aacctgatcgccggcgagccggacatctcgcgcgtgccgatcatgatcgactcgtccaag
tgggaagtgatcgaagcgggcctcaagtgcatccagggcaagggcatcgtcaactccatt
tccatgaaggaaggcgtcgagcagttcaagcaccacgcccgcctgtgcaagcgctatggc
gctgccgtggtggtgatggcgttcgacgaagtcggccaggccgatactgcagcgcgcaag
aaggaaatctgccagcgcagctacgacatcctggtcaacgaagtgggcttcccaccggaa
gacatcatcttcgacccgaacatcttcgccgtcgccaccggcatcgaagagcacaacaac
tacgccgtcgacttcatcgaggcctgtgcctacatccgtgaccacctgccgcacgccctg
agttcgggcggtgtgtccaacgtgtcgttctcgttccggggcaacaacccggtgcgcgaa
gccatccactcggtgttcctgtaccacgctatccagaatggcctgaccatgggtatcgtc
aacgccggccagctggaaatctatgacgagatcccggctgcactgcgtgaaaaggtcgag
gacgtggtgctcaaccgtaccccgcatggcaccgacgcactgctggccatcgccgacgac
tacaagggcggcggcgcaacccgggaagttgaaaacgaagagtggcgctcgctgccggtg
gaaaaacgcctggagcacgcactggtcaagggcatcaccgcgttcatcgtcgaagacacc
gaggaatgccgccagcagtgcgcacgcccgatcgaagtgatcgaaggcccgctgatgaat
ggcatgaacgtggtcggcgacctgttcggcgcgggcaagatgttcctgccccaggtggtc
aagtcggcccgcgtgatgaaacaggcggtagcacacctgatcccgttcatcgaagccgag
aaaggcgacaaaccggaggccaagggcaagatcctgatggccacggtaaaaggcgacgtg
cacgacatcggcaagaacatcgtcggcgtggtgctgggctgcaacggctacgacatcgtc
gacctcggcgtgatggtgccggccgagaagatcctgcaaaccgcccgcgacgagaagtgc
gacattatcggcctgtccggcctgatcacgccgtcgctggacgaaatggtccacgttgcc
cgcgaaatgcagcgccaaggcttccagttgccgctgatgatcggcggtgccaccacttcc
aaggcgcacactgcggtcaagatcgaaccgaagtacagcaacgacgccgtagtctatgtg
accgacgcctcgcgtgcggtcggcgtggccactcagctgttgtccaaagaactgaagccg
ggcttcgtcgagaaaactcgccaggactatgtggaagtacgcgagcgcaccgccaaccgc
agcgcccgcaccgagcgcctgagctatgcccaggctgtcgccgccaaacctcagtacgac
tgggctggctatcagccagcggtgccctccttcaccggcgtcaaggtgctggaagacatc
gacctgcgcaccctggccgagtacatcgactggaccccgttcttcatctcctgggacctg
gccggcaagttcccgcgcatcctcaccgacgaagtggtcggcgaggctgccacggcgctg
tacaaggatgcccgcgagatgctcgacaagctgatcgacgaaaagctcatcagcgcccgc
gcggtgttcggcttctggccagccaaccaggtggccgatgacgatatcgaagtgtacggt
gaggacggtcaggccctggctaccctgcatcacctgcgccagcagaccatcaagccggac
ggcaagcccaactggtcgctggccgacttcgtcgcgccgaaggccagtggcgttaccgac
tacgtcggcggtttcatcaccactgctggcatcggtgccgaggaagtggccaaggcctac
caggacaagggcgacgactacagctcgatcatggtcaaggccctggccgaccgcctggcc
gaggcctgtgccgaatggctgcacgaacaggtgcgtaaagagcactggggttatgcccgc
gacgaacacctggacaacgaagcgctgatcaaggagcagtaccgcggcattcgcccggct
cccggctacccggcctgcccggaccacaccgagaaggaaaccctgttccgcctgcttgat
ggcactgccatcggcgagaccgggccgagcggcgtgttcctcaccgatcacttcgcgatg
ttcccggcggcggcagtcagcggctggtactttgctcacccacaggcgcagtactttgcc
gtgggcaaggtcgacaaggaccagatcgagcgctacagcgcgcgcaagggccaggatgtg
agtgtcagcgagcgctggttggcgcctaacctcgggtacgacagctaa
DBGET
integrated database retrieval system