Pseudomonas inefficax: RIN61_26420
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Entry
RIN61_26420 CDS
T09811
Name
(GenBank) TolC family protein
KO
K18300
outer membrane protein, multidrug efflux system
Organism
pix
Pseudomonas inefficax
Module
pix_M00641
Multidrug resistance, efflux pump MexEF-OprN
Brite
KEGG Orthology (KO) [BR:
pix00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pix02000
]
RIN61_26420
01504 Antimicrobial resistance genes [BR:
pix01504
]
RIN61_26420
Transporters [BR:
pix02000
]
Other transporters
Pores ion channels [TC:
1
]
RIN61_26420
Antimicrobial resistance genes [BR:
pix01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexEF-OprN [MD:
M00641
]
RIN61_26420
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OEP
DUF3584
Motif
Other DBs
NCBI-ProteinID:
WNN39677
LinkDB
All DBs
Position
5857851..5859266
Genome browser
AA seq
471 aa
AA seq
DB search
MNLLKPLTPSLLALALAACAVGPDYQAPATEPAQLASDVQAKAYDRSRFEGLWWKQFDDP
VLNQLVQASLDGNRDLRVAFARLKSARSIREDAENDQFPVVTSRASSDIGKGQVPGQTTQ
RVNSERYDLGLDMAWELDLFGRIQRQIEASEAQEAVAAADLQQLQVSLIAELVDAYGQLR
GAQLREKIALANLKTQQESRAITETLRDAGVGNDLDVVRADARLAGVEATVPQLQAEQAR
ARHRIATLLGQRPEALSVDLSPKALPAIAKALPVGDPGELLRRRPDIRSAERQLAAATAN
VGVATADLFPRVSLSGFLGFTAARGSQIGSSAANAWALGPSITWAAFDLGSVRARLRGAK
ADAEGALANYEQQVLLALEESANAFSDYDKTQQRLLSLMRQSDASRKAAELASIRYREGT
VDYLVLLDAERERLSAEDAQAQGEVELYRGIVSIYKALGGGWQPETVASAR
NT seq
1416 nt
NT seq
+upstream
nt +downstream
nt
atgaacctgctcaaacccttgaccccgagcctgctggcgctggccctggcggcctgcgcg
gtaggcccggactaccaggcgccggccaccgagcccgcgcaactggccagcgatgtacag
gccaaggcttacgaccgtagccgtttcgaaggcctgtggtggaagcagttcgacgacccg
gtgctgaaccagctggtgcaggcttcgctggacggcaaccgtgacctgcgcgtggccttt
gcccgcctgaagtcggcccgttcgatccgcgaagacgcagaaaacgatcagttcccggtg
gtcaccagccgcgccagcagcgacatcggcaagggccaggtccccggccagaccacgcaa
cgggtgaacagcgagcgctacgacctgggcctggacatggcctgggagcttgacctgttc
ggccgcatccagcgccagatcgaggccagcgaagcccaggaagcggtagccgcggccgac
ctgcagcagttgcaggtcagcctgatcgccgagctggtcgatgcctacggccagctgcgc
ggcgcgcaattgcgcgagaagatcgccctggccaacctcaagacccagcaggaatcgcgg
gccatcaccgaaaccctgcgcgatgccggcgtgggcaacgaccttgacgtggtgcgggcc
gacgcgcgcctggccggggtcgaagccaccgtgccgcaactgcaggcggaacaggcgcgg
gcccggcatcgcatcgccaccctgctcgggcagcgccccgaggcgctcagcgtcgacctg
tcgcccaaggccctgccggccattgccaaggcgctaccggtgggagacccgggagaactg
ctgcgccgccgcccggacatccgcagcgccgaacgccagctggcggctgccaccgccaac
gttggcgtagcgacggccgacctgttcccgcgtgtcagcctcagcggcttcctcggcttt
actgccgcccgtggctcgcaaataggctcctcggcagccaatgcctgggcgctgggcccg
agcatcacctgggctgccttcgacctgggcagcgtgcgcgcccgcctgcgcggtgccaag
gccgatgccgaaggggcgctggccaactatgaacagcaggtgttgctggccctggaagaa
tcggccaacgccttcagcgactacgacaagacccagcagcggctgttgtcgctgatgcgc
cagagcgacgccagccgcaaggcggcggaactggcctcgattcgttatcgcgagggtacg
gtggactacctggtgctgctcgatgccgaacgtgagcggctgagcgctgaagatgcccag
gcccagggtgaggtcgagctgtaccgcggcatcgtctccatctacaaggccctgggcggc
ggctggcaaccggagactgtagccagcgcgcgctga
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