Pseudomonas izuensis: LAB08_R22940
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Entry
LAB08_R22940 CDS
T08555
Symbol
mdeB
Name
(GenBank) alpha-ketoglutarate dehydrogenase
KO
K00163
pyruvate dehydrogenase E1 component [EC:
1.2.4.1
]
Organism
piz
Pseudomonas izuensis
Pathway
piz00010
Glycolysis / Gluconeogenesis
piz00020
Citrate cycle (TCA cycle)
piz00620
Pyruvate metabolism
piz00785
Lipoic acid metabolism
piz01100
Metabolic pathways
piz01110
Biosynthesis of secondary metabolites
piz01120
Microbial metabolism in diverse environments
piz01200
Carbon metabolism
piz01210
2-Oxocarboxylic acid metabolism
Module
piz_M00307
Pyruvate oxidation, pyruvate => acetyl-CoA
Brite
KEGG Orthology (KO) [BR:
piz00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00010 Glycolysis / Gluconeogenesis
LAB08_R22940 (mdeB)
00020 Citrate cycle (TCA cycle)
LAB08_R22940 (mdeB)
00620 Pyruvate metabolism
LAB08_R22940 (mdeB)
09108 Metabolism of cofactors and vitamins
00785 Lipoic acid metabolism
LAB08_R22940 (mdeB)
Enzymes [BR:
piz01000
]
1. Oxidoreductases
1.2 Acting on the aldehyde or oxo group of donors
1.2.4 With a disulfide as acceptor
1.2.4.1 pyruvate dehydrogenase (acetyl-transferring)
LAB08_R22940 (mdeB)
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Paralog
Gene cluster
GFIT
Motif
Pfam:
PDH_E1_M
Transketolase_C_1
Transketolase_N
Transketolase_C
Motif
Other DBs
NCBI-ProteinID:
BCX67658
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Position
2546269..2548968
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AA seq
899 aa
AA seq
DB search
MNPPDSPAQLPGQAAEDLQEIAEWRDALRSVIAHGGTAQAKKILDMLVAVASESDIGWRP
SHGTPYINTISVEHQPVFPGDLAIEERLASIMRWNALAMVARANHAYGELGGHIASYASA
ADLFEVGFNHFFKARTESSGGDLVFYQPHSAPGVYARAFLEGRLDEQDLQHYRQEIGAKT
QGARGLSSYPHPWLMPDFWQFPTGSMGIGPISSIYQARFMRYLHHRGLQDTTGRTVWGVF
GDGEMDEPESMSALTLAAREGLDNLVWVVNCNLQRLDGPVRGNGRIIDELEALFGGAGWN
VIKLVWGSDWDGLFARDTDGALVRALSSTVDGQFQTFAAKDGRFNREQFFGQNEALAHLA
QDLTDEQIDRLKRGGHDVVKIYAAYRSALLEDRKPTVILAQTKKGFGMGDAGQGRMTVHQ
QKKLDREALIAFRNRFNLPLTDEQAAALSFFKPDEDSAEMRYLHERRRALGGYMPARSSA
CEPLAVPGIDSYGAFAIAAADKEMSTTMAFVRMLGGLLRDKQLGPRIVPIVADEARTFGM
ASLFKQIGIYSSVGQRYEPEDIGSILSYREALDGQILEEGISEAGAISSWVAAATSYSVH
GLPMLPFYIYYSMFGFQRVGDLIWAAADQRARGFLLGATAGRTTLGGEGLQHQDGNSHLM
ASTVPNCRAYDPAFAGEFAVILDHGMRQMLERQVDEFYYVTLMNENYPQPDLPEGVEQAI
IKGMYLYARQEAEGARGRVQLLGSGAILREAIAAAELLARDWNIDSLVWSVTSFTELARD
ARDVERWNRLHPEQPAHQSHVQQSLNDTAPIIACTDYVRALPQLIASYLNARYTVLGTDG
FGRSDTRHRLRTFFEVDRHQIVLSALTALVHEGLLDAGVCSEAIARYGIDVEGVAPWQA
NT seq
2700 nt
NT seq
+upstream
nt +downstream
nt
atgaacccgcccgacagccctgcccaattaccgggccaggcagcagaagatctccaggaa
atcgccgaatggcgtgatgccttgcgctcggtcatcgcccatggcggcacagcccaggcg
aaaaagatcctcgacatgctggtggcggtggcaagcgagtcggacatcggttggcggccc
agtcatggcacgccttacatcaacaccatcagtgtcgagcatcagccggtgtttccgggg
gatctggccatcgaagagcgcctggcgtcgatcatgcgctggaacgcgttggcgatggtt
gccagggccaaccacgcctatggtgaattgggcgggcacatcgccagttatgccagcgcc
gccgacctgttcgaagtgggtttcaaccatttcttcaaggcccgcaccgaaagcagcggg
ggcgatctggtgttctatcagccgcactcggcgccgggcgtctatgcccgggcctttctc
gagggacgcctcgacgagcaggatttgcagcactatcggcaggaaatcggcgcaaagacc
cagggtgcacggggcttgtcgagttacccgcacccctggttgatgccggacttctggcag
ttcccgaccgggtccatgggcatcggtccgatcagttcgatctaccaggcgcgtttcatg
cgttatctgcaccaccggggcctgcaagacaccacgggccggaccgtttggggcgtgttt
ggcgacggtgaaatggatgagccggagagtatgtcggcgctgaccctggccgcacgggag
gggttggacaatctggtgtgggtggtcaattgcaacctgcagcggctggacgggccggtg
cgcggcaatggtcgcatcatcgacgagctggaggcactgttcggcggggccggctggaac
gtgatcaaactggtctgggggtccgattgggacgggttgtttgcacgggataccgatggc
gcgctggtgcgggcgctgtccagcaccgtcgatggtcagttccagacgttcgcagccaag
gacgggcgcttcaatcgcgagcaattcttcggtcagaacgaagcattggcgcacttggcc
caggacctgaccgacgagcagatcgaccgcctcaagcgcggtggacacgacgtggtgaag
atctatgccgcttaccgcagcgcactgctcgaagaccgcaaacccacggtcattctggcg
cagaccaagaaggggttcggcatgggtgatgccgggcagggccggatgaccgtgcaccag
cagaagaagctcgacagggaggcactgatcgcgtttcgcaaccgtttcaatctgccgttg
accgatgagcaggccgccgcgttgagctttttcaaacccgacgaagacagcgccgaaatg
cgctatctgcatgagcgtcgccgggcgttgggcgggtacatgcccgcgcgatcctccgcc
tgcgagccattggccgtccctggcatcgacagctacggtgcctttgccatcgccgccgcc
gacaaggaaatgtccaccaccatggccttcgtccggatgctcggcggattgctgcgggac
aagcaactggggccgcgcatcgtgccgatcgtggccgatgaagcgcgtacgttcggcatg
gccagcctgttcaagcagatcggcatctactccagcgtcggccagcgatatgaaccggaa
gacatcggttcgatcctgagctatcgggaagccctggacgggcagattctggaagagggc
atcagcgaggccggggcaatcagttcctgggtggcagccgcgaccagttactcggtgcat
ggcctgccgatgttgccgttctacatctactactcgatgttcggcttccagcgcgtcggc
gacctgatctgggcggcggccgatcaacgggcccggggcttcctgcttggggccaccgca
gggcgcacgacgctggggggcgaaggcctgcaacaccaggacggcaacagccacctgatg
gcgtcgacggtccccaactgccgcgcctacgacccggcattcgccggcgaattcgcagtg
attctggaccatggcatgcgccagatgctggagcgtcaggtggacgagttttactacgtc
accttgatgaacgagaactacccgcagcccgacctccctgaaggtgtcgaacaggcgatc
atcaaaggcatgtacctgtacgcccgacaggaagcagaaggtgcccgtggccgcgtgcag
ttgctgggctccggggccatcctgcgcgaagccatcgccgccgccgagttactggcccgc
gactggaacatcgatagcctggtgtggagcgtcaccagtttcaccgaactggcccgcgat
gcccgtgatgtcgagcgctggaatcgccttcatccagaacaaccggcgcaccagagtcac
gttcaacaatcactcaacgacaccgcgccgatcattgcctgcaccgactacgttcgcgcc
ttgcctcagttgatcgccagttatctgaatgcccgttacacggtactcggcaccgacggc
ttcggacgcagcgatacccgccaccggctgcgcacgtttttcgaggtggaccgtcatcag
atcgtgttgagcgcgttgacggcgctggtgcacgagggactgctcgatgccggtgtctgc
tccgaggcgattgccagatacggcatcgatgtcgagggggtggcgccttggcaggcgtga
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