Pseudomonas izuensis: LAB08_R24200
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Entry
LAB08_R24200 CDS
T08555
Symbol
metH
Name
(GenBank) methionine synthase
KO
K00548
5-methyltetrahydrofolate--homocysteine methyltransferase [EC:
2.1.1.13
]
Organism
piz
Pseudomonas izuensis
Pathway
piz00270
Cysteine and methionine metabolism
piz00450
Selenocompound metabolism
piz00670
One carbon pool by folate
piz01100
Metabolic pathways
piz01110
Biosynthesis of secondary metabolites
piz01230
Biosynthesis of amino acids
piz04980
Cobalamin transport and metabolism
piz04981
Folate transport and metabolism
Module
piz_M00017
Methionine biosynthesis, aspartate => homoserine => methionine
Brite
KEGG Orthology (KO) [BR:
piz00001
]
09100 Metabolism
09105 Amino acid metabolism
00270 Cysteine and methionine metabolism
LAB08_R24200 (metH)
09106 Metabolism of other amino acids
00450 Selenocompound metabolism
LAB08_R24200 (metH)
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
LAB08_R24200 (metH)
09150 Organismal Systems
09154 Digestive system
04981 Folate transport and metabolism
LAB08_R24200 (metH)
04980 Cobalamin transport and metabolism
LAB08_R24200 (metH)
Enzymes [BR:
piz01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.13 methionine synthase
LAB08_R24200 (metH)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Met_synt_B12
S-methyl_trans
Pterin_bind
B12-binding_2
B12-binding
ComA
HrpE
Motif
Other DBs
NCBI-ProteinID:
BCX67783
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Position
complement(2690109..2693819)
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AA seq
1236 aa
AA seq
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MSDRSVRLQALKHALKERILILDGGMGTMIQSYKLEEQDYRGKRFADWPSDVKGNNDLLV
LTRPDVIGGIEKAYLDAGADILETNTFNATRISMADYGMEALAYELNVEGARLARKVADA
KTLENPDKPRFVAGVLGPTSRTCSLSPDVNNPGYRNVTFDELVENYTEATKGLIEGGVDL
ILIETIFDTLNAKAAIFAVQGVYEELGVELPIMISGTITDASGRTLSGQTTEAFWNSVAH
AKPISVGLNCALGASELRPYLEELSNKAGTHVSAHPNAGLPNEFGEYDELPSQTAKVIEE
FAQSGFLNIVGGCCGTTPGHIEAIAKAVAGYAPRQIPEIPKACRLSGLEPFTIDRNSLFV
NVGERTNITGSAKFARLIREDNYTEALEVALQQVEAGAQVIDINMDEGMLDSKKAMVTFL
NLIAGEPDISRVPIMIDSSKWEVIEAGLKCIQGKGIVNSISMKEGVEQFIHHAKLCKRYG
AAVVVMAFDEAGQADTEARKKEICKRSYDILVNEVGFPPEDIIFDPNIFAVATGIEEHNN
YAVDFINACAYIRDELPYALTSGGVSNVSFSFRGNNPVREAIHSVFLLYAIRAGLTMGIV
NAGQLEIYDQIPVELRDAVEDVILNRTPEGTDALLAIADKYKGDGSVKEAETEEWRNWDV
NKRLEHALVKGITTHIVEDTEESRQSFARPIEVIEGPLMSGMNIVGDLFGAGKMFLPQVV
KSARVMKQAVAHLIPFIELEKGDKPEAKGKILMATVKGDVHDIGKNIVGVVLGCNGYDIV
DLGVMVPAEKILQVAKEEKCDIIGLSGLITPSLDEMVHVAREMQRQDFHLPLMIGGATTS
KAHTAVKIEPKYSNDAVVYVTDASRAVGVATQLLSKELKAGFVEKTREEYIEVRERTANR
SARTERLSYAASIAKKPQFDWSTYTPVKPTFTGSRVLDNIDLKVLAEYIDWTPFFISWDL
AGKFPRILQDEVVGEAATALYADAQEMLAKLIDEKLISARAVFGFWPANQVRDDDIELYG
DDGKPLAKLHHLRQQIIKTDGKPNFSLADFVAPKDSELTDYVGGFITTAGIGAEEVAKAY
QDAGDDYNSIMVKALADRLAEACAEWLHQQVRKEHWGYAKDETLDNEALIKEQYTGIRPA
PGYPACPDHTEKATLFALLDPEAAEMRAGRSGVFLTEHYAMFPAAAVSGWYFAHPQAQYF
AVGKIDKDQVQSYTSRKGQELSVTERWLAPNLGYDD
NT seq
3711 nt
NT seq
+upstream
nt +downstream
nt
atgtccgatcgcagcgtccgccttcaagctctcaagcacgccctcaaagagcgcatcctg
attctcgatggcggcatgggcacgatgatccagagctacaagctcgaagagcaggactac
cggggcaaacgcttcgccgactggccgagcgatgtcaaaggcaacaacgacctgttggtg
ttgacccgcccggacgtgattggcggcatcgagaaggcctacctggatgccggcgccgac
atcctggaaaccaacaccttcaacgccacccggatttccatggccgattacggcatggaa
gcactggcctacgaactgaacgtagaaggcgcccgcctggcgcgcaaggtcgccgacgcg
aaaaccctcgagaacccggacaagccgcgcttcgtcgccggcgtgctcggcccgaccagc
cgtacctgctcgctatccccggacgtgaacaaccccggctaccgcaacgtgaccttcgat
gagctggtggaaaactacaccgaggccaccaaaggcctgatcgaaggcggcgtcgacctg
atcctgatcgaaaccattttcgacaccctcaacgccaaggccgcaatcttcgccgtgcaa
ggcgtctatgaagaactgggcgtcgaattgccgatcatgatttccggcaccatcaccgac
gcctccggccgtaccctgtccggccagaccaccgaagccttctggaactccgtggcccac
gccaaaccgatctcggtcggcctgaactgcgccctcggtgccagcgaattgcgcccgtac
ctggaagagttgtcgaacaaggcaggcacccacgtttccgcgcacccgaacgccggcctg
ccgaacgaattcggcgagtacgacgaactgccatcgcagaccgccaaggtcatcgaagaa
ttcgcccaaagcggcttcctgaacatcgtcggcggctgctgcggcaccaccccgggccac
atcgaagccatcgccaaggccgtggccggctatgcgccgcgccagattccggaaatcccc
aaggcttgccgcctctcgggcctggagccgttcaccatcgatcgcaactcgctgttcgtc
aacgtcggcgagcgcaccaacatcaccggttccgccaaattcgcccggctgatccgcgag
gacaactacaccgaagccctggaagtcgccctgcagcaggtcgaggccggcgcccaggtg
atcgacatcaacatggacgaagggatgctcgattcgaagaaggccatggtgaccttcctc
aatctgattgccggcgaaccggacatctcccgcgtaccgatcatgatcgactcctcgaag
tgggaagtgatcgaagccggcctcaagtgcatccagggcaagggcatcgtcaactcgatc
agcatgaaagaaggcgtcgagcagttcatccatcacgccaagctgtgcaagcgctatggc
gccgccgtggtggtgatggcgttcgacgaagccggccaggccgacaccgaagcgcgcaag
aaagagatctgcaagcgttcgtacgacattctggtcaacgaagtcggcttcccgccggaa
gacatcatcttcgacccgaacatcttcgcggtggccaccggtatcgaagaacacaacaac
tatgccgtggacttcatcaacgcctgtgcctacatccgcgacgagctgccgtatgccctg
acgtcgggcggcgtgtccaacgtgtcgttctcgttccgtggcaacaacccggtgcgcgag
gcaatccactcggtattcctgctgtacgcgatccgcgccggcctgaccatgggtatcgtc
aacgccggtcagctggaaatctacgaccagattccggtggagctgcgtgacgcggtcgag
gacgtgatcctcaaccgtaccccggaaggcaccgacgccctcctcgccatcgccgacaag
tacaagggcgacggcagcgtcaaggaagccgagaccgaagaatggcgcaactgggacgtc
aacaagcgtctggagcatgcactggtcaagggcatcaccacgcacatcgtcgaagacacc
gaagaatcccgccagtccttcgcccgcccgatcgaagtgatcgaaggcccgctcatgtcc
ggcatgaacatcgtcggtgacctgttcggcgccggcaaaatgttcctgccgcaggtggtg
aaatccgcccgcgtaatgaagcaggccgtggcccacctgatcccgttcatcgaactggaa
aaaggcgacaagccggaagccaagggcaagatcctcatggccacggtcaagggcgacgta
cacgacatcggcaagaacatcgtcggcgtggtgctgggttgtaacggttacgacatcgtc
gacctcggcgtgatggtgccggcggaaaaaatcctccaggtggccaaggaagagaagtgc
gacatcattggcctgtccggcctgatcaccccgtcgctggatgaaatggtccatgttgcc
cgtgaaatgcagcgccaggatttccacctgccgttgatgatcggtggcgccaccacctcc
aaggcgcacacggcggtgaagatcgagcccaagtacagcaacgatgcggtggtgtacgtc
accgacgcctcccgcgcggtgggtgtggccacgcagttgttgtccaaggaactgaaagcc
ggtttcgtcgaaaagacccgcgaggaatacatcgaagtccgcgagcgcaccgccaaccgc
agtgcccgtaccgaacgcctgagctacgccgcatccattgcgaaaaaaccgcagttcgac
tggagcacctacacgccggtcaaaccgacgttcaccggttccagagtgctggataacatc
gacctcaaggtgctggccgagtacatcgactggacgccgttctttatctcctgggacctg
gccggcaaattcccacgcatcctccaggatgaagtggtcggcgaagccgccaccgcgttg
tacgccgatgcccaggaaatgctcgccaaactgatcgacgaaaagctgatcagcgcccgt
gcggtgttcggcttctggccggccaatcaggtacgcgacgatgacatcgagctctacggc
gatgacggcaagccattggccaagctgcatcacctgcgccagcagatcatcaagaccgac
ggaaaaccgaacttctccctggccgacttcgtggcgccgaaggacagcgagttgaccgac
tacgtgggcggcttcatcaccaccgccggcatcggtgccgaagaggtagccaaggcctac
caggacgctggcgacgactacaactcgatcatggtcaaggccctggccgaccgtttggcc
gaggcctgcgccgagtggctgcaccagcaggtgcgtaaagagcactggggctacgccaag
gacgaaaccctcgacaacgaggcgctgatcaaagagcaatacaccggcatccgccctgcc
ccgggctacccggcgtgcccggatcacaccgagaaagccacgctgtttgcgttgctcgac
cccgaggccgccgaaatgcgtgccggccgtagcggcgtgttcctcaccgaacactatgcg
atgttcccggcagcggcagtcagcggctggtacttcgctcacccgcaggcgcaatacttc
gccgtgggcaagatcgacaaggaccaggtgcagagctacacgtcgcgcaaaggccaggag
ttgagcgtgaccgagcgctggctggcgccgaacctgggttacgacgactaa
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