Pseudomonas izuensis: LAB08_R27110
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Entry
LAB08_R27110 CDS
T08555
Name
(GenBank) multidrug efflux RND transporter permease subunit
KO
K18138
multidrug efflux pump
Organism
piz
Pseudomonas izuensis
Pathway
piz01501
beta-Lactam resistance
piz01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
piz00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
LAB08_R27110
01503 Cationic antimicrobial peptide (CAMP) resistance
LAB08_R27110
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
piz02000
]
LAB08_R27110
01504 Antimicrobial resistance genes [BR:
piz01504
]
LAB08_R27110
Transporters [BR:
piz02000
]
Other transporters
Electrochemical potential-driven transporters [TC:
2
]
LAB08_R27110
Antimicrobial resistance genes [BR:
piz01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
LAB08_R27110
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ACR_tran
MMPL
ParB_C
Motif
Other DBs
NCBI-ProteinID:
BCX68071
LinkDB
All DBs
Position
complement(3023825..3026923)
Genome browser
AA seq
1032 aa
AA seq
DB search
MPQFFIDRPVFAWVVALFILLAGALSIPQLPVAQYPDVAPPQIEIYAVYPGASAQTVDES
VVSLIEEELNGADHLLYFESQSSLGSATIKATFQPGTDPEMAQVDVQNRLKVVESRLPQA
VNQQGLQVEKVSAGFLLLITLTSSDGKLDDVALSDYLARNVMNEIKRLDGVGKAQLYGAE
RAMRIWIDPQKLIGFNLTPADVNAAIVAQNAQVSAGSIGDLPSRTTQEITATILVKGQLS
TPEEFADIVLKANPDGSTVRIADVARVEIGSQEYQFSTRLNGKPSTAVGVQLSPGANALS
TATLVRAKMDELSRYFPANVEYKIPYDTSPFVKVSITKVVYTLLEAMVLVFAVMFLFLQN
IRYTLIPTLVVPVALMGTFATMLALGFSINVLTMFGMVLAIGILVDDAIVVVENVERIMA
TEGLSPKDATRKAMKQITGAIIGITLVLVAVFIPMAFMQGSVGVIYQQFSLSMATSILFS
AFLALTLTPALCATLLKPIAKGEHHEKTGFFGWFNRRFEQLTARYQGWVAYALKRSGRYL
LIYGVLLVGLGLCFSRLPSSFLPVEDQGYTITDIQLPPGASKNRTVQVVEQIEAHNATEP
GVGDSTVILGFSFSGSGQNAALAFTTLKDWSERGGDDSASSIADRANIALGQIKDAMAFA
VLPPPVDGLGTSSGFEFRLQDRGGLGHDTLMRARTELLAAAEKSPILMNVRESALAEAPQ
VQLIVDRKQANALGVSFADIGSVLSTAVGSSYINDFPNQGRMQRVVVQAEGDQRSQVDDL
LKIHVRNNAGNMVPLSSFVQAKWTQGPAQLTRYNGYPAISISGEPKPGHSTGEAMAEIER
LVAQGPAGLGQEWTGLSLQERLSGSQAPILLGLSLLIVFLCLAALYESWSIPTSVLLVVP
LGVLGAVLAVTVRGMPNDVFFKVGLITIIGLSAKNAILIIEFAKSLVDEGHDLIDATLQA
ARLRLRPIVMTSLAFILGVVPLAIATGASSASQQAIGTGVIGGMITATLAVIFVPMFFVV
VMKLVHKRHKNP
NT seq
3099 nt
NT seq
+upstream
nt +downstream
nt
atgccgcagttctttatcgaccgcccggtgttcgcctgggtggtcgccctgttcatcctg
ctcgccggtgcgctgtccatcccgcagttgccggtggcgcagtaccccgacgtcgcaccg
ccacaaattgaaatttatgccgtgtaccccggcgcctcagcgcagaccgtggacgagagc
gtggtcagcctgatcgaggaagagctcaacggtgccgaccatctgttgtatttcgaatcg
caaagcagcctcggcagcgccacgatcaaggcgacgttccagcccggcaccgatccggaa
atggcccaggtggatgtgcagaaccgcctgaaagtcgtggagtcgcgcctgccgcaagcg
gtcaatcaacagggcttgcaggtagagaaagtctccgccggtttcctgttgttgatcacc
ctgacctccagcgacggcaagctcgacgacgtagcgctcagcgactacctggcacgcaac
gtgatgaacgagatcaagcgtctggacggcgtcggcaaggcccagttgtatggtgccgaa
cgggccatgcgcatctggatcgacccgcagaaactgatcggtttcaacctcacccccgcc
gacgtcaatgccgccatcgtcgcgcagaacgcccaggtgtcggcgggcagcatcggtgac
ttgccgagccgcaccactcaggagatcaccgcgaccattctggtcaaaggccagttgtcg
accccggaagagttcgccgacatcgtgctcaaggccaatccggacggttccactgtgcgc
atcgccgatgtggcccgggtcgagatcggcagccaggaataccagttttccacgcgcctg
aacggcaagccctcgaccgccgtcggcgtgcaactgtcgccgggggccaatgccctgagt
accgcgaccctggtgcgggcgaagatggatgagctgtcgcgctacttcccggccaacgtc
gagtacaagatcccctacgacacctcgcctttcgtcaaagtctcgatcaccaaagtggtt
tacaccttgctcgaggcaatggtgctggtgttcgcggtgatgttcctgttcctgcagaac
attcgctacacgctgatccccacgctggtggtgccggtggcgctgatgggcaccttcgcg
accatgttggcgctgggtttctcgatcaacgtgttgaccatgttcggtatggtattggcc
atcggcattctggtggacgacgcgattgtggtggtggagaacgtcgagcggatcatggcc
actgaaggtctttcacccaaggacgcgacccgcaaggccatgaaacagatcaccggcgcg
atcatcggcatcaccctggtgctggtggcggtgttcattccgatggcgttcatgcagggt
tcggtcggggtgatctaccaacagttctcgttgtcgatggccacttcgattctgttctcg
gccttcctcgccctgaccttgaccccggcactgtgcgcgaccctgctcaagccgattgcc
aagggtgagcatcacgaaaaaaccgggtttttcggctggttcaaccgtcgcttcgagcaa
ctcactgcacgttatcaagggtgggtcgcctacgcgctaaaacgcagcggtcgttacctg
ctgatctatggggtgctgctggtcggcctggggctgtgcttcagtcgtctgccctcctcg
ttcctgccggtggaggatcagggctataccatcaccgacattcaactgccaccgggcgcg
agcaaaaaccgcacggtgcaggtggtcgagcagatcgaagcgcacaacgccaccgagccc
ggcgtcggtgacagcaccgtgattctcggcttcagcttctccggcagcggccagaatgcg
gcactggcgtttaccacgctcaaggactggtccgagcgtggcggcgatgactcggcgagt
tcgattgccgaccgcgccaacatcgccctcggccagatcaaggacgccatggccttcgcg
gtcttgccgcccccggtggacggcctcggcacctccagtggcttcgaattccgcttgcag
gaccgtggcggcctgggccatgacacattgatgcgcgcacgcaccgaattgctggccgcc
gccgagaagagcccgatcctgatgaacgtgcgtgaaagcgccctggctgaagcgccgcaa
gtgcaattgatcgtcgaccgcaagcaggccaatgccttgggtgtttcttttgccgacatc
ggcagcgtgctgtccaccgccgtcggttcgagctacatcaacgacttccccaatcaggga
cggatgcagcgggtggtggtccaggctgaaggcgatcagcgcagtcaggtcgacgacctg
ttgaagatccacgtgcgcaacaatgccgggaacatggtgccgctgtcgtccttcgtccag
gccaaatggacccaaggcccggcgcagttgacccgctacaacggctatccggcgatcagc
atctcgggcgagccgaaaccgggccacagcactggcgaagccatggctgaaatcgagcgt
ctggtggcacaagggccggccggattgggtcaggaatggaccggcctgtcgttgcaggaa
cgcttgtccggcagtcaggcaccgatccttctcggcttgtcgctgctgatcgtgttcctg
tgcctggcggcgttgtacgagagctggtcgatcccgacctcggtgctgctggtagtgccg
ctgggtgtgctcggcgcggtgttggcggtgaccgtccgaggcatgcccaacgacgtgttc
ttcaaggtcggcttgatcaccatcatcggtctgtcggcgaagaacgcgatcctgatcatt
gagttcgccaagagcctggtcgacgaaggccacgacctgatcgacgccaccctgcaagcc
gcgcgcctgcgattgcggccgatcgtgatgacgtccctggcgttcatcctcggcgtggta
ccgctggccatcgccaccggcgccagctcggccagccagcaagccatcggcacaggggtg
atcggcggaatgatcaccgcgacactggcggtgatatttgtgccgatgttttttgtggtg
gtgatgaagctcgttcacaaacgccacaagaatccctaa
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