Pseudomonas izuensis: LAB08_R27120
Help
Entry
LAB08_R27120 CDS
T08555
Name
(GenBank) efflux RND transporter periplasmic adaptor subunit
KO
K03585
membrane fusion protein, multidrug efflux system
Organism
piz
Pseudomonas izuensis
Pathway
piz01501
beta-Lactam resistance
piz01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
piz00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
LAB08_R27120
01503 Cationic antimicrobial peptide (CAMP) resistance
LAB08_R27120
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
piz03036
]
LAB08_R27120
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
piz02000
]
LAB08_R27120
01504 Antimicrobial resistance genes [BR:
piz01504
]
LAB08_R27120
Chromosome and associated proteins [BR:
piz03036
]
Prokaryotic type
Chromosome partitioning proteins
Divisome proteins
LAB08_R27120
Transporters [BR:
piz02000
]
Other transporters
Accessory factors involved in transport [TC:
8
]
LAB08_R27120
Antimicrobial resistance genes [BR:
piz01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
LAB08_R27120
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HlyD_3
HlyD_D23
Biotin_lipoyl_2
CusB_dom_1
Motif
Other DBs
NCBI-ProteinID:
BCX68072
LinkDB
All DBs
Position
complement(3026939..3028096)
Genome browser
AA seq
385 aa
AA seq
DB search
MSNNLLARLSLLALALTLSACDKASTAEEQAPLATVRIETLSARPLTISSELSGRIAAPR
IAEVRARVAGVVLQRTFREGSDVKQGDVLFRIDPAPFKADLDSAEAALRKAEANAFQARL
QEQRYAQLIDDKAISGQDYDNARANARQTAADVAASKAAVERARLNLGYATVTAPISGRI
GRALVTEGALVGQNETTPLALIQQLNPIHADLTQSTRELNDLRRAFRSGQLKEVGQGQAK
ATLIQDDGSLYPLPGKLLFSDITVDPGTGQIILRSEFPNPDLDLLPGSFVRVRLEQAVDQ
QGISVPQRAIQRDSAGIAQVLLLDAQQRVARQPVELGPVQNDRWIVTGGLKAGDRIVIEG
LQHARPGEKVQIDDSPLPLAQVSGQ
NT seq
1158 nt
NT seq
+upstream
nt +downstream
nt
atgtcaaacaatctgcttgccaggctcagccttctggccctggcgttgacgctgagcgcg
tgcgacaaggcctcgaccgccgaagaacaggcaccactggccaccgtgcgcatcgaaacc
ctctcagcccgaccgctgaccatcagcagcgagctgagcgggcgcatcgccgcgccgcgc
atcgccgaagtgcgcgcccgtgtcgccggcgtggtcctgcaacgcaccttccgtgaaggc
agcgacgtgaaacagggcgacgtgctgttccgcatcgacccggcgccgttcaaggccgac
ctcgacagcgccgaagcggcattgcgcaaggccgaggccaacgcgttccaggcccggctg
caagaacagcgctacgcccagttgatcgacgacaaggccatcagcggccaggactacgac
aatgcccgggcgaatgcgcggcagaccgccgccgatgttgccgccagtaaagccgcggtc
gagcgtgcccggttgaaccttggctacgccaccgtcaccgcgccgatttccgggcgcatc
ggtcgcgcgctggtcaccgaaggcgcactggtcgggcagaacgaaaccacgccactggcg
ctgattcaacagctgaacccgatccacgccgaccttacccaatcgacccgcgaactcaac
gacctgcgccgcgccttccgttccggtcaactcaaggaagtgggccagggacaggccaag
gcgacgctgattcaggacgacggcagcctctacccgctaccgggcaagctgctgttctcc
gacatcacggtcgacccgggcactggtcagatcatcctgcgcagcgaattccccaacccg
gacctcgacctgctgcccggcagcttcgtgcgggtgcgcctggagcaagcggtggaccag
caaggcatcagcgtgccgcaacgggcgatccagcgtgacagcgccggcattgctcaagtg
ctgctactcgacgcgcagcaacgggtcgcccggcaaccggtggaactgggcccggtgcag
aacgatcgctggatcgtcaccggcgggctcaaagccggcgaccgcattgtcatcgaaggc
ctgcaacacgcgcgccccggcgaaaaggtgcagatcgacgactcccctcttccacttgcc
caggtttctggccagtaa
DBGET
integrated database retrieval system
