Pseudomonas izuensis: LAB08_R29120
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Entry
LAB08_R29120 CDS
T08555
Symbol
metC
Name
(GenBank) cystathionine beta-lyase
KO
K01760
cysteine-S-conjugate beta-lyase [EC:
4.4.1.13
]
Organism
piz
Pseudomonas izuensis
Pathway
piz00270
Cysteine and methionine metabolism
piz00450
Selenocompound metabolism
piz01100
Metabolic pathways
piz01110
Biosynthesis of secondary metabolites
piz01230
Biosynthesis of amino acids
Module
piz_M00017
Methionine biosynthesis, aspartate => homoserine => methionine
Brite
KEGG Orthology (KO) [BR:
piz00001
]
09100 Metabolism
09105 Amino acid metabolism
00270 Cysteine and methionine metabolism
LAB08_R29120 (metC)
09106 Metabolism of other amino acids
00450 Selenocompound metabolism
LAB08_R29120 (metC)
Enzymes [BR:
piz01000
]
4. Lyases
4.4 Carbon-sulfur lyases
4.4.1 Carbon-sulfur lyases (only sub-subclass identified to date)
4.4.1.13 cysteine-S-conjugate beta-lyase
LAB08_R29120 (metC)
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Motif
Pfam:
Cys_Met_Meta_PP
Rhodanese
Aminotran_1_2
Aminotran_5
Motif
Other DBs
NCBI-ProteinID:
BCX68272
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All DBs
Position
complement(3262009..3264762)
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AA seq
917 aa
AA seq
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MSQTVTPGQLQQWLFDGQEVALFDVREHGQYGEAHLFFGVNLPYSRLELEVRRLAPNPQV
RLVIHDQNGGDVAERAAQRLYALGYERVHALEGGADGWQAAGYQLFAGVHVPSKAFGELV
EEVSHTPHVTAQQLAEWQTRGEPLVVLDGRPFDEYRKMTIPGSVCCPNGELGYRIHDLVP
DGRTPIVVNCAGRTRSIIGAQTLINLGVKNPVYALENGTQGWYLEDFLLEHGSTRRYADE
VSPKTLPQQRLAAAQLAERAGVKTVVAAQVEQWAGEATRSLFLCDVRTAEEFAAGSLPGA
QHTPGGQLIQSTDLYIGVRQARLVLIDSDGVRAPIVASWLRQLGHEAYVLAGGVSSGLAL
PANDVIAHEALPLITAQALSDVLKDEAVTLIDLRPSMTYRKGHIAGSRWSIRSLLAQHVE
GEQRPLVLLADDAQLAAFAAQELPEAQRAQVRLLDGGLDAWRAAGFSVQETPDIPSNDQC
IDFLFFTHDRHSGNKDAARQYLAWEIGLLAQMSDDEIASLKPLQGQVHQDSQVRTRLVHS
ARAQGVGGRAVNVPVTRLSTVLFDNLAQMRDARARRDSERVLSYGARGNPTAFALEDLVT
ELEGGYRTRLFGTGLAAVAQTFLAYLRPGDHVLITDAVYAPVRRLAREFLQPFGIQVSYF
VPDGRDLEALLQANTKMVYTEVPGSLLYELCDLPAIAALCKPQGILLAVDNTWGSGYLYR
PLTLGADISIMALTKYLSGHSDVVMGSVCTREEVWPALASMSDNFGATVSPDDAYLVLRG
ARTLAPRLEVHERQALEVAHWLQAQPQVKRVFHPALPDHPNHALWRRDFTGSNGLLSFEL
NEADTAYVERFIDALQLFGLGASWGGFESLITVADTQDRNSAADRSLNPVLRLHIGLEDV
AELIEDLQRGFAVLGDG
NT seq
2754 nt
NT seq
+upstream
nt +downstream
nt
atgagccagaccgtaaccccagggcaattgcagcagtggctgttcgacgggcaggaagtc
gccctgtttgatgtgcgcgagcatggccagtatggcgaagcccatctgtttttcggagtc
aatctgccctacagccgactggagctggaggttcggcgactggcgcccaaccctcaggtg
cgactggtgatccatgaccagaacggtggcgatgttgccgagcgcgctgcgcagcgtctt
tacgcattggggtatgagcgtgtacacgcactcgagggcggtgccgatggctggcaggcc
gccggttatcagctgtttgccggcgtgcatgtaccgtccaaggcttttggcgagttggtc
gaagaggtcagtcacacgccgcatgtcaccgcacaacaactggctgaatggcaaacccga
ggcgagcctttggtggtgctcgacggccgaccgttcgatgaataccgcaagatgaccatt
cccggttccgtgtgctgtccgaacggcgaactggggtatcgcattcatgatctggtgccg
gacggcagaacgccgatcgtggtcaattgcgcaggtcgaacacgcagtattatcggcgct
cagaccctgatcaacctgggtgtgaaaaacccggtttacgccctggaaaacggcacgcag
ggctggtatctggaagatttcctgctggagcatggcagcacccgtcgctatgccgatgag
gtgtcgccgaaaaccttgccgcaacagcgtctcgcggcggcacaactcgctgaacgggca
ggggtgaaaactgttgtggccgcgcaggtcgagcagtgggccggggaggccacacgcagc
ctgtttctatgcgatgtgcggaccgccgaggagtttgccgccggcagcctgccgggtgcg
caacacacaccaggtgggcagttaattcaatccaccgatctgtacattggcgtgcgccag
gcgcggctggtgttgatcgacagcgatggcgtgcgcgcgccgatcgttgccagttggctt
cggcagctgggacatgaagcttatgtgctggcaggaggggtgagtagtggtctggcgttg
cccgcaaacgatgtgatcgcccacgaggcgctgccattgatcactgcgcaggcactgtct
gatgtattgaaagatgaggccgtcacgctgatcgatctgcgtccgagcatgacctaccgt
aaaggccacattgcgggttcgcgctggtcgatccgctcattgctcgcacaacacgtggag
ggtgagcagcgaccgctggtgctgttggccgatgatgcgcaactggccgcgttcgctgca
caggaattgcccgaagcccagcgtgcgcaagtacgtctgctggacggcgggctcgatgcc
tggcgtgcagcgggtttctccgtgcaggaaaccccggacattccatccaatgatcaatgc
attgattttctgttctttacccatgaccgccactccggcaacaaggacgcggcgcgtcaa
tacctggcgtgggagatcggtttgctggcgcagatgagcgacgacgaaatcgccagcctc
aaaccgttgcagggtcaagtacatcaggactcgcaggtgcgtacgcgcctggtgcattcg
gcgcgggcccagggtgtcggcggccgcgcagtcaatgtaccggtcactcgcttgagcacc
gtgctgttcgacaacctggcacaaatgcgtgacgcccgtgctcgccgtgatagtgagcgt
gtgctgagttatggggcgcgcggcaatccaacggcgtttgccctcgaggacctggtcacc
gaactggagggcggttatcgcactcgcttgttcggaaccgggctggcagcggtcgcacag
acgtttctcgcttacctgcggcccggcgatcatgtgctgatcaccgatgcggtatacgcg
cctgtgcggcgactggcacgggagtttcttcaacccttcggtattcaggtcagctatttc
gtcccggacggccgtgacctggaagctctactgcaagccaacaccaaaatggtctacacc
gaagtgccaggctctttgttgtatgagctgtgcgacctgccggccattgctgccctgtgt
aaaccgcaaggtatcctgctcgccgtcgacaatacctggggctccggttacctgtaccgg
ccgctgacgctcggcgcagacatctcgatcatggcactgactaaatacctgagcggccac
agtgatgtggtcatgggtagtgtctgcacccgcgaagaggtgtggccggcactcgcgtcc
atgagcgacaactttggagcaaccgtcagccctgacgacgcctatctggtactgcgcggc
gcacgaacgctggcgccacgactggaggtgcatgaacgtcaggctctggaagtcgcccat
tggttgcaagcgcaaccgcaggtgaaacgggtgttccatccggccttacccgatcatccc
aatcatgccttgtggcggcgggatttcactggcagcaatggcttgctgtcctttgagttg
aatgaagcggacaccgcgtatgtcgagcgcttcattgatgcgctgcagctgttcgggttg
ggtgcttcctggggcggttttgaaagtctgattaccgtggccgatacccaagaccgcaac
agtgcggcggatcgctcattgaacccagtgttgcgcttgcacatcgggctggaagatgtc
gcagagttgattgaggatctgcagcgcgggtttgcggttttgggagatggctaa
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