Pseudomonas izuensis: LAB08_R34420
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Entry
LAB08_R34420 CDS
T08555
Name
(GenBank) TolC family protein
KO
K18300
outer membrane protein, multidrug efflux system
Organism
piz
Pseudomonas izuensis
Module
piz_M00641
Multidrug resistance, efflux pump MexEF-OprN
Brite
KEGG Orthology (KO) [BR:
piz00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
piz02000
]
LAB08_R34420
01504 Antimicrobial resistance genes [BR:
piz01504
]
LAB08_R34420
Transporters [BR:
piz02000
]
Other transporters
Pores ion channels [TC:
1
]
LAB08_R34420
Antimicrobial resistance genes [BR:
piz01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexEF-OprN [MD:
M00641
]
LAB08_R34420
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OEP
DAO_C
Motif
Other DBs
NCBI-ProteinID:
BCX68800
LinkDB
All DBs
Position
complement(3895250..3896668)
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AA seq
472 aa
AA seq
DB search
MNALKLFLPSLLVTALAACTVGPDYKAPDTAPANSVYAKASNYDQSRFESVWWQQFDDPT
LNQLVSKSLEGNRDLRVAFARWKAARAIRDDISNDNLPVVTSRASSQIGKAQEPGLTDKR
VNIERYDLGLDMAWEIDLFGRIQRALESSDAQEGAAAADLYQLRVTMIAELVDAYGQLRG
AQLREKIALANLKNQSDSRAVTVSLRDAGVGNELDVVRADARLAAVEASVPQLQAEQVRQ
KNRIATLLGERPDQLSVSLSPKDLPAIAKALPIGDPAELLRRRPDVLAAERRLASATADI
GVATADLFPRVSLSGFLGFTAGRGSQIGSAAAKAWSLGPSITWAAFDLGSVRARIRGADA
NAEGALATYEQQVLLALEESENAFSDYGKRQQRLLSLIKQSESSRAAADLAQTQYKEGAV
DYLVLLDAQRERLNAEDAQAQGEIDQYRGIVAIYKSLGGGWDSGGNKVATRN
NT seq
1419 nt
NT seq
+upstream
nt +downstream
nt
atgaatgctctgaagctttttttacccagccttctggtgaccgcgctcgccgcctgcacg
gtggggccggactacaaggccccggacaccgcaccggccaatagcgtttatgcgaaagca
agcaactacgatcaatcacgatttgaatcggtgtggtggcagcagttcgacgaccccacg
ctgaaccagctggtgagcaaatccctggaaggcaaccgcgatttgcgcgtggcctttgcc
cgctggaaagcggcgcgggcgattcgtgacgacatcagcaacgacaacctgccggtggtc
accagtcgcgccagcagccaaatcggcaaggcgcaggaacccggtttgacggacaaacgt
gtgaacatcgaacgctatgacctgggcctggacatggcctgggaaatcgacctgttcgga
cgcatccagcgtgcacttgagtcgagcgacgcccaggaaggcgcggcagccgcggatttg
taccagttgcgggtcactatgatcgccgagttggtggacgcctacgggcaactgcgcggt
gcgcaactgcgggaaaaaatcgccctggccaacctcaagaaccagagcgattcacgcgct
gtgaccgtcagtctgcgcgatgccggcgtgggtaacgaactcgacgtggtacgcgccgat
gcgcggctggctgccgtcgaagccagcgtgccgcaactgcaagcggaacaggtccggcag
aaaaaccgcatcgccaccttgctcggtgagcgtccggatcaattgagtgtgtccctgagt
ccgaaggacctgccggccatcgccaaggcactgcccatcggtgatcccgccgaactgctg
cgtcgccgcccggatgtgctggcggccgaacgccggctcgcttccgccacggcggatatc
ggcgttgccaccgccgacctgtttccccgggttagcttgagcggcttcctgggtttcacc
gccgggcgcggttcgcaaatcggctccgccgccgccaaggcctggagcctgggtccgagc
atcacctgggcagccttcgacctgggcagtgtgcgagcacgtatccggggtgccgacgcc
aacgcggaaggcgccttggccacctatgaacagcaagtgctgctggcgctggaagaatcg
gagaatgcgttcagcgactacggcaaacgccagcagcggttgttgtcgttgatcaagcaa
agcgaatcgagcagggcggcggcggatctggcgcagacgcaatacaaagaaggcgctgtg
gactatctggtgctgctcgatgcccagcgtgaacggctgaatgccgaggatgcgcaggcc
caaggtgaaatcgatcaataccggggtatcgttgcgatctacaaatcgttgggaggcggg
tgggacagcggtggcaacaaggtggcaaccagaaactga
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