Pseudomonas izuensis: LAB08_R36020
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Entry
LAB08_R36020 CDS
T08555
Name
(GenBank) 2-oxoglutarate dehydrogenase E1 component
KO
K00164
2-oxoglutarate dehydrogenase E1 component [EC:
1.2.4.2
]
Organism
piz
Pseudomonas izuensis
Pathway
piz00020
Citrate cycle (TCA cycle)
piz00785
Lipoic acid metabolism
piz01100
Metabolic pathways
piz01110
Biosynthesis of secondary metabolites
piz01120
Microbial metabolism in diverse environments
piz01200
Carbon metabolism
piz01210
2-Oxocarboxylic acid metabolism
Module
piz_M00009
Citrate cycle (TCA cycle, Krebs cycle)
piz_M00011
Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
Brite
KEGG Orthology (KO) [BR:
piz00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
LAB08_R36020
09108 Metabolism of cofactors and vitamins
00785 Lipoic acid metabolism
LAB08_R36020
Enzymes [BR:
piz01000
]
1. Oxidoreductases
1.2 Acting on the aldehyde or oxo group of donors
1.2.4 With a disulfide as acceptor
1.2.4.2 oxoglutarate dehydrogenase (succinyl-transferring)
LAB08_R36020
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Gene cluster
GFIT
Motif
Pfam:
OxoGdeHyase_C
Transket_pyr
E1_dh
2-oxogl_dehyd_N
Motif
Other DBs
NCBI-ProteinID:
BCX68960
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All DBs
Position
4126345..4129164
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AA seq
939 aa
AA seq
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MHSQKTSVLDGGNVAYVEELYEQFLNDPSAVSEQWRSYFDSLRPPQENGQRHADDIAHAP
IIEEFIQLARRIDRKASTIAGPDPDIARRQLAAQSLILSYRMVGARSANLDPLWWAPGAA
IPELSPAYHGLSSTDLAQKNELPGHAFWQGEASISDLISALETTYCGTLATEFMYLSDPV
QRQWWIERLESTWAKPTLTPERKLRILERLCAAEGLEKYLHARYTGQKRYSLEGGESLIV
LLDELIRHGAKTGVRDIVMGMAHRGRLNVLVNTLGKPPASLFNEFENTATHPLPAGDVKY
HKGYTADLATEYGAMKVELAFNPSHLEIVNPVVQGIAHARGKQYPTSQRNSVLAVEIHGD
TAISGQGVVMETLSLSYTKGYGTGGSVHVVVNNQIGFTTSDPQETRSSFFCTDIAKLIEA
PVLHVNADDPEAVVNAVQLALDYRQTFGKSVVIDLVCFRRHGHQEQDTPHMTQPLMYRSV
ATHPGVRQLYANKLVASGLITEAHVLSVAQAYRDGMDNARPATPNQTAAGTGSKGCAESS
SQSEQRVYLAPSMAQIKALALRIVDVPTDLKLHPLVSKVTQARGEMATGRKPLDWGMAEH
MAFASILSAGRDVRLSGEDCERGTFGHRHAVLNPQNREVRGQGKYRPLDHIAGQQGTFTV
INSVLSEAAVLGFEYGYTLGKPEALVMWEAQFGDFANGAQVVIDQFIASGAVKWGQHSAL
TLLLPHGQDGQGPEHASARLERYLQLCAQDNMRVCQPTTPAQFFHLLRRQALHASPRPLI
VMSPKSLLRHPEAVSTLESLSSGSFQEVIGDSAATPTKARKITRVILCSGKIHYELLAHR
RSQEAEHVALVRMEQLFPFPYEALAEELGHYPNLQSVIWCQEEAKNQGAWTFVGVHLRDI
IPETASLRYAGPPPSASTAPGNMAMHVEQQRRIMHSAFS
NT seq
2820 nt
NT seq
+upstream
nt +downstream
nt
atgcatagccagaaaacctcagtcctggacggcggcaacgtcgcctacgttgaagagtta
tacgaacaattcctgaacgaccccagtgccgtttcagaacagtggcgcagttatttcgac
tcgcttcggccgccgcaggaaaacggccagcgacatgcagacgacatcgcccatgcccct
atcattgaagagttcatccaacttgcacgaagaatcgaccgcaaagcatcaacgattgcc
ggaccggacccggacattgcgcgtcgacaactggctgcacaatcgctgatcctgagctac
cgcatggtcggcgcgcgcagtgcgaatcttgatccactgtggtgggcaccgggggcggca
atacctgagttgtcgcccgcttatcatgggttgagcagcaccgacctggcccagaaaaac
gaactgcctggccatgcattctggcaaggtgaggcgtcgatttccgatctcatatccgcc
ttggaaacaacgtactgcggcaccctcgctaccgagttcatgtacctcagtgaccccgtg
cagcgccaatggtggattgagcgccttgaatccacttgggccaaacccacgctgacaccc
gaaagaaaactacgcattctcgagcgcctctgtgccgccgaaggcctggagaaatacttg
catgcccgttacaccgggcaaaaaagatactcgctggaaggcggcgagtctttaattgtc
ctgcttgatgaactcatcaggcacggggcaaaaaccggtgtgcgtgacatcgtcatgggc
atggcacatcgtggccgcttgaatgtgctggtcaacacgctgggaaaaccaccggcctca
ctgttcaacgaattcgagaacacggccacccaccccctcccagcgggtgacgtcaagtac
cacaagggttataccgcagatctcgctactgaatacggcgccatgaaggtggagttggcg
ttcaacccttcgcatctggaaatcgtcaacccggtggttcaagggatagcccacgcgcgt
ggcaagcagtatccaacctcacagcgcaacagcgtgctggcagttgaaatccacggggat
acggcgatttccggccagggtgtcgtcatggagaccctgagtttgagttacaccaaaggc
tatggcaccggcgggtccgtccatgtggtggttaacaatcagattggctttaccacttcc
gatccccaggaaacgcgctcgtcctttttctgcaccgacattgccaagctgatcgaggcg
cccgtattgcatgtgaacgccgacgatccagaggctgtcgtcaacgcggtacagctcgcc
ctggattaccgccagacctttggcaaaagcgttgtcatcgatctggtctgcttccgccgt
catgggcaccaggaacaggacacgcctcacatgacccaaccgttgatgtatcgctcggtc
gccactcatccaggcgttcgtcaactgtatgccaataagctggtggcgtccgggttgatc
accgaggcgcacgtgttgtcggtcgctcaggcctaccgcgacggtatggacaatgctcgg
cctgctacacccaaccaaaccgctgcagggaccgggtccaagggctgcgccgaatcatcc
agccaatcggaacagcgtgtttatctggcgccgtcaatggcgcagatcaaggccttggcc
ctgcgaatcgtcgacgtgccaacagacttgaaactgcaccctctggtgtccaaggtcact
caggcccgaggtgagatggcgacggggaggaaaccgcttgactggggcatggccgaacat
atggcgtttgcctcgatcctgtctgcggggcgcgatgtcaggctcagcggcgaagattgc
gagcgcggtacgttcgggcaccggcacgccgtgctcaacccgcaaaatcgtgaggtgcgt
ggccaaggcaaataccgcccgctggatcacatcgccgggcagcaagggacgttcacggtc
attaactcggtgttgtccgaggctgctgtgctgggctttgaatatggctacacacttggc
aagccggaagcactggtgatgtgggaggcgcaattcggagatttcgccaacggtgcgcaa
gtggtcatcgaccaattcattgcgtccggcgccgtcaaatggggacagcacagcgcactg
actcttctgctgccacatggccaggatggccagggccctgagcacgcctccgcgaggctg
gagcggtacctgcaactgtgcgcgcaagacaacatgcgcgtctgtcagccaacaacgccg
gcccagtttttccatctcctgcgccggcaagcactgcacgcttcgccccggccactgatc
gtgatgtcgcccaagtccttgcttcgccatccggaagccgtcagcacacttgaatccctg
tccagcggctcgtttcaggaggtaatcggtgacagcgcagccacccccaccaaggcgcgc
aagattacccgggtcatcctttgttcggggaaaatccactacgaactgttggcgcaccgc
cgcagtcaagaggccgaacacgttgcgcttgtccgaatggaacaactcttcccttttccc
tacgaggcactggcagaagaactcggtcactacccgaatctgcaatcagtgatctggtgc
caggaggaggcgaaaaaccagggcgcctggacattcgttggcgttcatttgcgcgacatc
atccccgaaacagcatcgctgcgttacgcagggccaccacccagtgcttccaccgcaccc
ggcaatatggcgatgcatgtcgagcagcaacggcggatcatgcacagcgcgttctcgtag
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